RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 IRF2BPLQ9H1B7 796 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 NKX2-4Q9H2Z4 354 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 CYP26B1Q9NR63 512 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 CLEC1BQ9P126 229 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 RWDD3Q9Y3V2 267 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 USP32Q8NFA0 1604 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 PLS3P13797 630 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 SSPNQ14714 243 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 TARBP2Q15633 366 aaKnown RBP2.55□□□□□ -2
CCDC144A-201ENST00000328495 TCERG1LQ5VWI1 586 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 LCNL1Q6ZST4 164 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 AMIGO3Q86WK7 504 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 LDHDQ86WU2 507 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 ZNF227Q86WZ6 799 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 NETO2Q8NC67 525 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 USP33Q8TEY7 942 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 MMP19Q99542 508 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 F8W031 263 aaPredicted RBP2.55□□□□□ -2
CCDC144A-201ENST00000328495 IRS4O14654 1257 aaPredicted RBP2.55□□□□□ -2
CCDC144A-201ENST00000328495 ITGAVP06756 1048 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 THBDP07204 575 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 ZNF200P98182 395 aaPredicted RBP2.55□□□□□ -2
CCDC144A-201ENST00000328495 FBLN7Q53RD9 439 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 ZNF772Q68DY9 489 aaPredicted RBP2.55□□□□□ -2
CCDC144A-201ENST00000328495 ANKS3Q6ZW76 656 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 BTN2A2Q8WVV5 523 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 HNRNPLLQ8WVV9 542 aaKnown RBP2.55□□□□□ -2
CCDC144A-201ENST00000328495 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.55□□□□□ -2
CCDC144A-201ENST00000328495 GULP1Q9UBP9 304 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 SLIT2O94813 1529 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 C10orf71Q711Q0 1435 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 GJB6O95452 261 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 CPP00450 1065 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 SNRPB2P08579 225 aaKnown RBP2.55□□□□□ -2
CCDC144A-201ENST00000328495 GLI4P10075 376 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 HOXC12P31275 282 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 KCNAB2Q13303 367 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 E4F1Q66K89 784 aaPredicted RBP2.55□□□□□ -2
CCDC144A-201ENST00000328495 WWC2Q6AWC2 1192 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 MRM1Q6IN84 353 aaKnown RBP2.55□□□□□ -2
CCDC144A-201ENST00000328495 IQCEQ6IPM2 695 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 PEX11GQ96HA9 241 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 CCDC140Q96MF4 163 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 PCDHA5Q9Y5H7 936 aa2.55□□□□□ -2
CCDC144A-201ENST00000328495 RGPD1P0DJD0 1748 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 MAGI3Q5TCQ9 1506 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 ZC3H12DA2A288 527 aaKnown RBP2.54□□□□□ -2
CCDC144A-201ENST00000328495 C7orf72A4D263 438 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 MEFVO15553 781 aaPredicted RBP2.54□□□□□ -2
CCDC144A-201ENST00000328495 MYO1BO43795 1136 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 BUB1BO60566 1050 aaPredicted RBP2.54□□□□□ -2
CCDC144A-201ENST00000328495 TOM1O60784 492 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 PRR5P85299 388 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 SLC9A5Q14940 896 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 SLC10A6Q3KNW5 377 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 CNKSR3Q6P9H4 555 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 DCP2Q8IU60 420 aaKnown RBP2.54□□□□□ -2
CCDC144A-201ENST00000328495 IGDCC3Q8IVU1 814 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 NLGN1Q8N2Q7 840 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 NPLOC4Q8TAT6 608 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 MICAL1Q8TDZ2 1067 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 TSPAN17Q96FV3 270 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 MTA3Q9BTC8 594 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 RNF38Q9H0F5 515 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 GPRC5CQ9NQ84 441 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 FGD6Q6ZV73 1430 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 COL24A1Q17RW2 1714 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 MAP3K5Q99683 1374 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 DLC1Q96QB1 1528 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 STK10O94804 968 aaKnown RBP2.54□□□□□ -2
CCDC144A-201ENST00000328495 ECI1P42126 302 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 KCNJ6P48051 423 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 AFF3P51826 1226 aaKnown RBP2.54□□□□□ -2
CCDC144A-201ENST00000328495 DDR2Q16832 855 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 ALG3Q92685 438 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 DIO2Q92813 273 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 LGR4Q9BXB1 951 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 MARCH2Q9P0N8 246 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 FAN1Q9Y2M0 1017 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 LRRC9Q6ZRR7 1453 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 MAGI1Q96QZ7 1491 aaPredicted RBP2.54□□□□□ -2
CCDC144A-201ENST00000328495 DISP2A7MBM2 1401 aa2.54□□□□□ -2
CCDC144A-201ENST00000328495 ZBTB7AO95365 584 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 FUCA1P04066 466 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 SCG5P05408 212 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 GTF2A2P52657 109 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 NCKAP1LP55160 1127 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 RPL11P62913 178 aaKnown RBP2.53□□□□□ -2
CCDC144A-201ENST00000328495 NAALADL2Q58DX5 795 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 ACBD5Q5T8D3 534 aaPredicted RBP2.53□□□□□ -2
CCDC144A-201ENST00000328495 FAM129CQ86XR2 697 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 CKAP2LQ8IYA6 745 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 FRS2Q8WU20 508 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 TRIM55Q9BYV6 548 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 AP5M1Q9H0R1 490 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 ST7Q9NRC1 585 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 IRS2Q9Y4H2 1338 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 IQCA1LA6NCM1 817 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 TBX1O43435 398 aa2.53□□□□□ -2
CCDC144A-201ENST00000328495 KRT38O76015 456 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms