RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 GFPT1Q06210 699 aaPredicted RBP14.1□□□□□ -0.15
CCDC60-201ENST00000327554 MAP3K12Q12852 859 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 GRIK3Q13003 919 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 THEMISQ8N1K5 641 aaPredicted RBP14.1□□□□□ -0.15
CCDC60-201ENST00000327554 SPATA5Q8NB90 893 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 KDM4CQ9H3R0 1056 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 CNNM1Q9NRU3 951 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 ATP2C2O75185 946 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 GNAT2P19087 354 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 BRD2P25440 801 aaKnown RBP14.1□□□□□ -0.15
CCDC60-201ENST00000327554 ERVK-9P63128 1117 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 PPP2R2AP63151 447 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 IRX1P78414 480 aaPredicted RBP14.1□□□□□ -0.15
CCDC60-201ENST00000327554 TROAPQ12815 778 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 TRIM28Q13263 835 aaKnown RBP14.1□□□□□ -0.15
CCDC60-201ENST00000327554 BIRC3Q13489 604 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 NAA25Q14CX7 972 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 NBPF9Q3BBW0 867 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 TMTC3Q6ZXV5 915 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 TMC4Q7Z404 712 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.1□□□□□ -0.15
CCDC60-201ENST00000327554 BAP1Q92560 729 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 ORAI2Q96SN7 254 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 ISCUQ9H1K1 167 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 NOD2Q9HC29 1040 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 RBM28Q9NW13 759 aaKnown RBP14.1□□□□□ -0.15
CCDC60-201ENST00000327554 MYH4Q9Y623 1939 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 DUOX1Q9NRD9 1551 aa14.1□□□□□ -0.15
CCDC60-201ENST00000327554 COL18A1P39060 1754 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 PPIP5K2O43314 1243 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 GBP2P32456 591 aaPredicted RBP14.09□□□□□ -0.15
CCDC60-201ENST00000327554 CCNHP51946 323 aaPredicted RBP14.09□□□□□ -0.15
CCDC60-201ENST00000327554 RCSD1Q6JBY9 416 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 RRAGAQ7L523 313 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 EIF1ADQ8N9N8 165 aaKnown RBP14.09□□□□□ -0.15
CCDC60-201ENST00000327554 HOOK2Q96ED9 719 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 PAPPAQ13219 1627 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 PALMO75781 387 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 FTCDO95954 541 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 DRD4P21917 467 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 DNA2P51530 1060 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 STK4Q13043 487 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 AGBL2Q5U5Z8 902 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 HGSNATQ68CP4 663 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 ARMC9Q7Z3E5 817 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 CATIPQ7Z7H3 387 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 EGFL6Q8IUX8 553 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 ZBTB38Q8NAP3 1195 aaPredicted RBP14.09□□□□□ -0.15
CCDC60-201ENST00000327554 ESR2Q92731 530 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 ZSCAN10Q96SZ4 725 aaPredicted RBP14.09□□□□□ -0.15
CCDC60-201ENST00000327554 PLIN2Q99541 437 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 EBF2Q9HAK2 575 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 TMEM59LQ9UK28 342 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 TNS3Q68CZ2 1445 aa14.09□□□□□ -0.15
CCDC60-201ENST00000327554 F8W031 263 aaPredicted RBP14.08□□□□□ -0.15
CCDC60-201ENST00000327554 RBAK-RBAKDNI3L0D1 243 aa14.08□□□□□ -0.15
CCDC60-201ENST00000327554 VEGFAP15692 232 aaPredicted RBP14.08□□□□□ -0.15
CCDC60-201ENST00000327554 NLRP5P59047 1200 aa14.08□□□□□ -0.15
CCDC60-201ENST00000327554 RASGRF1Q13972 1273 aa14.08□□□□□ -0.15
CCDC60-201ENST00000327554 VWA3BQ502W6 1294 aa14.08□□□□□ -0.15
CCDC60-201ENST00000327554 MEI1Q5TIA1 1274 aa14.08□□□□□ -0.15
CCDC60-201ENST00000327554 GKAP1Q5VSY0 366 aaPredicted RBP14.08□□□□□ -0.15
CCDC60-201ENST00000327554 SRBD1Q8N5C6 995 aaKnown RBP14.08□□□□□ -0.15
CCDC60-201ENST00000327554 CUL5Q93034 780 aa14.08□□□□□ -0.15
CCDC60-201ENST00000327554 BAZ2AQ9UIF9 1905 aaKnown RBP14.08□□□□□ -0.16
CCDC60-201ENST00000327554 PHF20L1A8MW92 1017 aa14.08□□□□□ -0.16
CCDC60-201ENST00000327554 BHMG1C9JSJ3 638 aaPredicted RBP14.08□□□□□ -0.16
CCDC60-201ENST00000327554 ORC4O43929 436 aa14.08□□□□□ -0.16
CCDC60-201ENST00000327554 SKAP2O75563 359 aaPredicted RBP14.08□□□□□ -0.16
CCDC60-201ENST00000327554 USP38Q8NB14 1042 aa14.08□□□□□ -0.16
CCDC60-201ENST00000327554 STAMBPL1Q96FJ0 436 aa14.08□□□□□ -0.16
CCDC60-201ENST00000327554 NDST4Q9H3R1 872 aa14.08□□□□□ -0.16
CCDC60-201ENST00000327554 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.08□□□□□ -0.16
CCDC60-201ENST00000327554 RREB1Q92766 1687 aa14.08□□□□□ -0.16
CCDC60-201ENST00000327554 SSU72P8A0A1W2PR75 194 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 DCDC2CA8MYV0 355 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 FCER1AP12319 257 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 FGFR2P21802 821 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 CTNNA1P35221 906 aaKnown RBP14.07□□□□□ -0.16
CCDC60-201ENST00000327554 TNNC1P63316 161 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 PDE4DQ08499 809 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 HLTFQ14527 1009 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCDC60-201ENST00000327554 IFIT1BQ5T764 474 aaKnown RBP14.07□□□□□ -0.16
CCDC60-201ENST00000327554 MSL1Q68DK7 614 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 CYB5RLQ6IPT4 315 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 PDXDC1Q6P996 788 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 RUFY4Q6ZNE9 571 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 CCSER1Q9C0I3 900 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 NEUROG2Q9H2A3 272 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 SEMA6BQ9H3T3 888 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 MMRN2Q9H8L6 949 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 ANAPC4Q9UJX5 808 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 FAM205AQ6ZU69 1335 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 MINDY4BA8MYZ0 360 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 SCG2P13521 617 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 INHBEP58166 350 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 RNASE9P60153 205 aaKnown RBP14.07□□□□□ -0.16
CCDC60-201ENST00000327554 CUL1Q13616 776 aa14.07□□□□□ -0.16
CCDC60-201ENST00000327554 ZKSCAN8Q15776 578 aaPredicted RBP14.07□□□□□ -0.16
CCDC60-201ENST00000327554 HIBCHQ6NVY1 386 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms