RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ARHGAP4P98171 946 aa21.26■□□□□ 0.99
EXOSC3-201ENST00000327304 SHC4Q6S5L8 630 aa21.26■□□□□ 0.99
EXOSC3-201ENST00000327304 C17orf99Q6UX52 265 aa21.26■□□□□ 0.99
EXOSC3-201ENST00000327304 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.26■□□□□ 0.99
EXOSC3-201ENST00000327304 PPP1R9BQ96SB3 815 aa21.26■□□□□ 0.99
EXOSC3-201ENST00000327304 FBXO2Q9UK22 296 aaPredicted RBP21.26■□□□□ 0.99
EXOSC3-201ENST00000327304 SRPRBQ9Y5M8 271 aaKnown RBP21.26■□□□□ 0.99
EXOSC3-201ENST00000327304 LCTP09848 1927 aa21.26■□□□□ 0.99
EXOSC3-201ENST00000327304 MCM7P33993 719 aa21.25■□□□□ 0.99
EXOSC3-201ENST00000327304 REM2Q8IYK8 340 aaPredicted RBP21.25■□□□□ 0.99
EXOSC3-201ENST00000327304 RPTORQ8N122 1335 aa21.25■□□□□ 0.99
EXOSC3-201ENST00000327304 ZNF202O95125 648 aa21.25■□□□□ 0.99
EXOSC3-201ENST00000327304 CAVIN2O95810 425 aa21.25■□□□□ 0.99
EXOSC3-201ENST00000327304 MAF1Q9H063 256 aa21.25■□□□□ 0.99
EXOSC3-201ENST00000327304 MRVI1Q9Y6F6 885 aa21.25■□□□□ 0.99
EXOSC3-201ENST00000327304 PFASO15067 1338 aa21.24■□□□□ 0.99
EXOSC3-201ENST00000327304 THSD7BQ9C0I4 1608 aa21.24■□□□□ 0.99
EXOSC3-201ENST00000327304 CCNT1O60563 726 aaKnown RBP21.24■□□□□ 0.99
EXOSC3-201ENST00000327304 TDP2O95551 362 aa21.24■□□□□ 0.99
EXOSC3-201ENST00000327304 ALDH1A1P00352 501 aa21.24■□□□□ 0.99
EXOSC3-201ENST00000327304 MAP2K2P36507 400 aa21.24■□□□□ 0.99
EXOSC3-201ENST00000327304 IL31RAQ8NI17 732 aa21.24■□□□□ 0.99
EXOSC3-201ENST00000327304 RMDN3Q96TC7 470 aa21.24■□□□□ 0.99
EXOSC3-201ENST00000327304 MMP19Q99542 508 aa21.24■□□□□ 0.99
EXOSC3-201ENST00000327304 EHMT1Q9H9B1 1298 aa21.24■□□□□ 0.99
EXOSC3-201ENST00000327304 FRMPD4Q14CM0 1322 aa21.24■□□□□ 0.99
EXOSC3-201ENST00000327304 EIF2AK2P19525 551 aaKnown RBP21.23■□□□□ 0.99
EXOSC3-201ENST00000327304 SYKP43405 635 aa21.23■□□□□ 0.99
EXOSC3-201ENST00000327304 CNTN2Q02246 1040 aa21.23■□□□□ 0.99
EXOSC3-201ENST00000327304 CLIC6Q96NY7 704 aa21.23■□□□□ 0.99
EXOSC3-201ENST00000327304 SDF4Q9BRK5 362 aa21.23■□□□□ 0.99
EXOSC3-201ENST00000327304 PXMP2Q9NR77 195 aa21.23■□□□□ 0.99
EXOSC3-201ENST00000327304 FCER1AP12319 257 aa21.22■□□□□ 0.99
EXOSC3-201ENST00000327304 USP11P51784 963 aa21.22■□□□□ 0.99
EXOSC3-201ENST00000327304 KCTD2Q14681 263 aa21.22■□□□□ 0.99
EXOSC3-201ENST00000327304 POTEB2H3BUK9 544 aa21.22■□□□□ 0.99
EXOSC3-201ENST00000327304 PGK2P07205 417 aa21.22■□□□□ 0.99
EXOSC3-201ENST00000327304 CYP3A4P08684 503 aa21.22■□□□□ 0.99
EXOSC3-201ENST00000327304 HSPA6P17066 643 aa21.22■□□□□ 0.99
EXOSC3-201ENST00000327304 C1QTNF8P60827 252 aa21.22■□□□□ 0.99
EXOSC3-201ENST00000327304 FAM200AQ8TCP9 573 aa21.22■□□□□ 0.99
EXOSC3-201ENST00000327304 FERMT2Q96AC1 680 aa21.22■□□□□ 0.99
EXOSC3-201ENST00000327304 FAM13BQ9NYF5 915 aa21.22■□□□□ 0.99
EXOSC3-201ENST00000327304 PLXNB2O15031 1838 aa21.22■□□□□ 0.99
EXOSC3-201ENST00000327304 ASTN1O14525 1302 aa21.22■□□□□ 0.99
EXOSC3-201ENST00000327304 SLC37A4O43826 429 aa21.21■□□□□ 0.99
EXOSC3-201ENST00000327304 ECM2O94769 699 aaPredicted RBP21.21■□□□□ 0.99
EXOSC3-201ENST00000327304 PTGDRQ13258 359 aa21.21■□□□□ 0.99
EXOSC3-201ENST00000327304 ARHGEF16Q5VV41 709 aa21.21■□□□□ 0.99
EXOSC3-201ENST00000327304 ELOA2Q8IYF1 753 aaPredicted RBP21.21■□□□□ 0.99
EXOSC3-201ENST00000327304 C4orf32Q8N8J7 132 aa21.21■□□□□ 0.99
EXOSC3-201ENST00000327304 FAM133AQ8N9E0 248 aa21.21■□□□□ 0.99
EXOSC3-201ENST00000327304 ZFP91Q96JP5 570 aaPredicted RBP21.21■□□□□ 0.99
EXOSC3-201ENST00000327304 PDLIM2Q96JY6 352 aa21.21■□□□□ 0.99
EXOSC3-201ENST00000327304 PDCD2LQ9BRP1 358 aa21.21■□□□□ 0.99
EXOSC3-201ENST00000327304 TMEM60Q9H2L4 133 aa21.21■□□□□ 0.99
EXOSC3-201ENST00000327304 MAPK4P31152 587 aa21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 PGM5Q15124 567 aa21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 PPP4R3AQ6IN85 833 aa21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 GPR142Q7Z601 462 aa21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 POTEDQ86YR6 584 aa21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 KCNH3Q9ULD8 1083 aa21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 DNAJC25-GNG10A0A024R161 153 aa21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 CYP3A7-CYP3A51PA0A087WV96 503 aa21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 SOWAHBA6NEL2 793 aa21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 FAM86B1E9PN63 330 aa21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 NEMFO60524 1076 aa21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 FAM86B2P0C5J1 330 aa21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 GCFC2P16383 781 aaKnown RBP21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 CYP3A7P24462 503 aa21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 CIITAP33076 1130 aa21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 ATP2C1P98194 919 aaPredicted RBP21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 NSUN6Q8TEA1 469 aaKnown RBP21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 MBOAT7Q96N66 472 aa21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 DDX25Q9UHL0 483 aaKnown RBP21.2■□□□□ 0.98
EXOSC3-201ENST00000327304 ZNFX1Q9P2E3 1918 aaKnown RBP21.19■□□□□ 0.98
EXOSC3-201ENST00000327304 TBC1D8O95759 1140 aa21.19■□□□□ 0.98
EXOSC3-201ENST00000327304 STX1AQ16623 288 aa21.19■□□□□ 0.98
EXOSC3-201ENST00000327304 ANO6Q4KMQ2 910 aa21.19■□□□□ 0.98
EXOSC3-201ENST00000327304 PCNX4Q63HM2 1172 aa21.19■□□□□ 0.98
EXOSC3-201ENST00000327304 MOXD1Q6UVY6 613 aa21.19■□□□□ 0.98
EXOSC3-201ENST00000327304 PLEKHH3Q7Z736 793 aa21.19■□□□□ 0.98
EXOSC3-201ENST00000327304 CYP2W1Q8TAV3 490 aa21.19■□□□□ 0.98
EXOSC3-201ENST00000327304 FGD4Q96M96 766 aa21.19■□□□□ 0.98
EXOSC3-201ENST00000327304 NAP1L4Q99733 375 aaKnown RBP21.19■□□□□ 0.98
EXOSC3-201ENST00000327304 RNF186Q9NXI6 227 aa21.19■□□□□ 0.98
EXOSC3-201ENST00000327304 KIAA1468Q9P260 1216 aa21.19■□□□□ 0.98
EXOSC3-201ENST00000327304 IVNS1ABPQ9Y6Y0 642 aa21.19■□□□□ 0.98
EXOSC3-201ENST00000327304 TRPA1O75762 1119 aa21.18■□□□□ 0.98
EXOSC3-201ENST00000327304 MYCLP12524 364 aaPredicted RBP21.18■□□□□ 0.98
EXOSC3-201ENST00000327304 ADORA2AP29274 412 aa21.18■□□□□ 0.98
EXOSC3-201ENST00000327304 ZNF76P36508 570 aa21.18■□□□□ 0.98
EXOSC3-201ENST00000327304 MRPS9P82933 396 aaKnown RBP21.18■□□□□ 0.98
EXOSC3-201ENST00000327304 ORC2Q13416 577 aaPredicted RBP21.18■□□□□ 0.98
EXOSC3-201ENST00000327304 ABRAQ8N0Z2 381 aa21.18■□□□□ 0.98
EXOSC3-201ENST00000327304 LENG9Q96B70 501 aa21.18■□□□□ 0.98
EXOSC3-201ENST00000327304 STRNO43815 780 aa21.18■□□□□ 0.98
EXOSC3-201ENST00000327304 ALDH5A1P51649 535 aaPredicted RBP21.18■□□□□ 0.98
EXOSC3-201ENST00000327304 GRB14Q14449 540 aa21.18■□□□□ 0.98
EXOSC3-201ENST00000327304 PRR16Q569H4 304 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms