RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 GOLGA8HP0CJ92 632 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 MCTP2Q6DN12 878 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 USP17L1Q7RTZ2 530 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 DYNLL2Q96FJ2 89 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 LZTS2Q9BRK4 669 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 TLR10Q9BXR5 811 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 SLAIN2Q9P270 581 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 KLRF2D3W0D1 207 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 NKRFO15226 690 aaKnown RBP eCLIP16.15■□□□□ 0.18
SSBP3-201ENST00000326956 LCA5LO95447 670 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 TNFRSF8P28908 595 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 SLC1A4P43007 532 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 TMEM266Q2M3C6 531 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 CCDC40Q4G0X9 1142 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 CACNA1SQ13698 1873 aa16.15■□□□□ 0.18
SSBP3-201ENST00000326956 GOLGA6L10A6NI86 522 aa16.14■□□□□ 0.17
SSBP3-201ENST00000326956 PJA2O43164 708 aa16.14■□□□□ 0.17
SSBP3-201ENST00000326956 GUCY2FP51841 1108 aa16.14■□□□□ 0.17
SSBP3-201ENST00000326956 LRRC63Q05C16 580 aa16.14■□□□□ 0.17
SSBP3-201ENST00000326956 PDXDC1Q6P996 788 aa16.14■□□□□ 0.17
SSBP3-201ENST00000326956 UNC13DQ70J99 1090 aa16.14■□□□□ 0.17
SSBP3-201ENST00000326956 MAATS1Q7Z4T9 603 aa16.14■□□□□ 0.17
SSBP3-201ENST00000326956 FBXO33Q7Z6M2 555 aa16.14■□□□□ 0.17
SSBP3-201ENST00000326956 SPATS2Q86XZ4 545 aaKnown RBP16.14■□□□□ 0.17
SSBP3-201ENST00000326956 MTMR8Q96EF0 704 aa16.14■□□□□ 0.17
SSBP3-201ENST00000326956 YY1AP1Q9H869 796 aa16.14■□□□□ 0.17
SSBP3-201ENST00000326956 VAT1LQ9HCJ6 419 aa16.14■□□□□ 0.17
SSBP3-201ENST00000326956 ESYT3A0FGR9 886 aa16.14■□□□□ 0.17
SSBP3-201ENST00000326956 CARSP49589 748 aaKnown RBP16.14■□□□□ 0.17
SSBP3-201ENST00000326956 ERFEQ4G0M1 354 aa16.14■□□□□ 0.17
SSBP3-201ENST00000326956 GUF1Q8N442 669 aaKnown RBP16.14■□□□□ 0.17
SSBP3-201ENST00000326956 CAPN7Q9Y6W3 813 aa16.14■□□□□ 0.17
SSBP3-201ENST00000326956 PVALEFA0A1B0GWK0 134 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 SSU72P8A0A1W2PR75 194 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 CYTH3O43739 400 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 ZPR1O75312 459 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 COBLL1Q53SF7 1204 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 KLHDC7AQ5VTJ3 777 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 SFMBT2Q5VUG0 894 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 SPTY2D1Q68D10 685 aaPredicted RBP16.13■□□□□ 0.17
SSBP3-201ENST00000326956 TBCKQ8TEA7 893 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 LARP4BQ92615 738 aaKnown RBP16.13■□□□□ 0.17
SSBP3-201ENST00000326956 TAF4BQ92750 862 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.13■□□□□ 0.17
SSBP3-201ENST00000326956 RAB34Q9BZG1 259 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 ZMYND12Q9H0C1 365 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 NUCKS1Q9H1E3 243 aaKnown RBP16.13■□□□□ 0.17
SSBP3-201ENST00000326956 DLEC1Q9Y238 1755 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 C12orf60Q5U649 245 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 FBXW10Q5XX13 1052 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 KRT12Q99456 494 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 EDEM3Q9BZQ6 932 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 CENPHQ9H3R5 247 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 STK17AQ9UEE5 414 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 SALL4Q9UJQ4 1053 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 ABCB11O95342 1321 aa16.13■□□□□ 0.17
SSBP3-201ENST00000326956 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.13■□□□□ 0.17
SSBP3-201ENST00000326956 MYMKA6NI61 221 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 GLI1P08151 1106 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 NT5C2P49902 561 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 RNASE9P60153 205 aaKnown RBP16.12■□□□□ 0.17
SSBP3-201ENST00000326956 HLTFQ14527 1009 aaKnown RBP eCLIP16.12■□□□□ 0.17
SSBP3-201ENST00000326956 BICDL1Q6ZP65 573 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 LRRC27Q9C0I9 530 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 CPVLQ9H3G5 476 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 PALMO75781 387 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 FTCDO95954 541 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 NR1D1P20393 614 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 TNNC1P63316 161 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 ENOX2Q16206 610 aaKnown RBP16.12■□□□□ 0.17
SSBP3-201ENST00000326956 RNF187Q5TA31 235 aaPredicted RBP16.12■□□□□ 0.17
SSBP3-201ENST00000326956 ANKS1AQ92625 1134 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 CELF1Q92879 486 aaKnown RBP16.12■□□□□ 0.17
SSBP3-201ENST00000326956 TMEM47Q9BQJ4 181 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 BIN2Q9UBW5 565 aaPredicted RBP16.12■□□□□ 0.17
SSBP3-201ENST00000326956 TRAF5O00463 557 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 KLRK1P26718 216 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 ARID5AQ03989 594 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 CALCRLQ16602 461 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 TMC4Q7Z404 712 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 REXO1Q8N1G1 1221 aaKnown RBP16.12■□□□□ 0.17
SSBP3-201ENST00000326956 BAP1Q92560 729 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 RIC8AQ9NPQ8 531 aa16.12■□□□□ 0.17
SSBP3-201ENST00000326956 MARCH6O60337 910 aa16.11■□□□□ 0.17
SSBP3-201ENST00000326956 SERPING1P05155 500 aa16.11■□□□□ 0.17
SSBP3-201ENST00000326956 HNRNPH1P31943 449 aaKnown RBP16.11■□□□□ 0.17
SSBP3-201ENST00000326956 EPS15P42566 896 aa16.11■□□□□ 0.17
SSBP3-201ENST00000326956 SF3B3Q15393 1217 aaKnown RBP16.11■□□□□ 0.17
SSBP3-201ENST00000326956 KRT79Q5XKE5 535 aa16.11■□□□□ 0.17
SSBP3-201ENST00000326956 KDM7AQ6ZMT4 941 aa16.11■□□□□ 0.17
SSBP3-201ENST00000326956 CCDC91Q7Z6B0 441 aa16.11■□□□□ 0.17
SSBP3-201ENST00000326956 WHAMMQ8TF30 809 aa16.11■□□□□ 0.17
SSBP3-201ENST00000326956 KAT2BQ92831 832 aa16.11■□□□□ 0.17
SSBP3-201ENST00000326956 ACSBG1Q96GR2 724 aa16.11■□□□□ 0.17
SSBP3-201ENST00000326956 ZNF287Q9HBT7 754 aa16.11■□□□□ 0.17
SSBP3-201ENST00000326956 GDF3Q9NR23 364 aa16.11■□□□□ 0.17
SSBP3-201ENST00000326956 CASZ1Q86V15 1759 aa16.11■□□□□ 0.17
SSBP3-201ENST00000326956 LOC102724428A0A0B4J2F2 783 aa16.11■□□□□ 0.17
SSBP3-201ENST00000326956 PALM3A6NDB9 673 aaPredicted RBP16.11■□□□□ 0.17
SSBP3-201ENST00000326956 FAM153BP0C7A2 387 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms