RNA–Protein interactions for RNA: ENST00000323250.9

TYMS-202, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-202ENST00000323250 APOA5Q6Q788 366 aa20.41■□□□□ 0.86
TYMS-202ENST00000323250 Q7L0L9 218 aa20.41■□□□□ 0.86
TYMS-202ENST00000323250 C16orf59Q7L2K0 433 aa20.41■□□□□ 0.86
TYMS-202ENST00000323250 GPKOWQ92917 476 aaPredicted RBP eCLIP20.41■□□□□ 0.86
TYMS-202ENST00000323250 MTG1Q9BT17 334 aaPredicted RBP20.41■□□□□ 0.86
TYMS-202ENST00000323250 PPP1R12CQ9BZL4 782 aa20.41■□□□□ 0.86
TYMS-202ENST00000323250 POLR3EQ9NVU0 708 aa20.41■□□□□ 0.86
TYMS-202ENST00000323250 SNX14Q9Y5W7 946 aa20.41■□□□□ 0.86
TYMS-202ENST00000323250 UMODL1Q5DID0 1318 aa20.41■□□□□ 0.86
TYMS-202ENST00000323250 MEIS2O14770 477 aa20.4■□□□□ 0.86
TYMS-202ENST00000323250 GH1P01241 217 aa20.4■□□□□ 0.86
TYMS-202ENST00000323250 CYP2C18P33260 490 aa20.4■□□□□ 0.86
TYMS-202ENST00000323250 GNAQP50148 359 aa20.4■□□□□ 0.86
TYMS-202ENST00000323250 FPGSQ05932 587 aa20.4■□□□□ 0.86
TYMS-202ENST00000323250 TRAF1Q13077 416 aa20.4■□□□□ 0.86
TYMS-202ENST00000323250 NBPF20Q3BBV1 942 aa20.4■□□□□ 0.86
TYMS-202ENST00000323250 MFSD5Q6N075 450 aa20.4■□□□□ 0.86
TYMS-202ENST00000323250 USP17L6PQ6QN14 398 aa20.4■□□□□ 0.86
TYMS-202ENST00000323250 ALDH8A1Q9H2A2 487 aaPredicted RBP20.4■□□□□ 0.86
TYMS-202ENST00000323250 TRMT13Q9NUP7 481 aaKnown RBP20.4■□□□□ 0.86
TYMS-202ENST00000323250 TLR3O15455 904 aaKnown RBP20.39■□□□□ 0.85
TYMS-202ENST00000323250 MMP3P08254 477 aa20.39■□□□□ 0.85
TYMS-202ENST00000323250 MRPS9P82933 396 aaKnown RBP20.39■□□□□ 0.85
TYMS-202ENST00000323250 SP2Q02086 613 aa20.39■□□□□ 0.85
TYMS-202ENST00000323250 FUT2Q10981 343 aa20.39■□□□□ 0.85
TYMS-202ENST00000323250 BCAS3Q9H6U6 928 aa20.39■□□□□ 0.85
TYMS-202ENST00000323250 FAM217BQ9NTX9 383 aaPredicted RBP20.39■□□□□ 0.85
TYMS-202ENST00000323250 MRVI1Q9Y6F6 885 aa20.39■□□□□ 0.85
TYMS-202ENST00000323250 FRMPD4Q14CM0 1322 aa20.38■□□□□ 0.85
TYMS-202ENST00000323250 SORBS3O60504 671 aa20.38■□□□□ 0.85
TYMS-202ENST00000323250 CSF2RAP15509 400 aa20.38■□□□□ 0.85
TYMS-202ENST00000323250 KRT32Q14532 448 aa20.38■□□□□ 0.85
TYMS-202ENST00000323250 KAT2BQ92831 832 aa20.38■□□□□ 0.85
TYMS-202ENST00000323250 NOC4LQ9BVI4 516 aaKnown RBP20.38■□□□□ 0.85
TYMS-202ENST00000323250 PPP4R2Q9NY27 417 aa20.38■□□□□ 0.85
TYMS-202ENST00000323250 SEC63Q9UGP8 760 aaKnown RBP20.38■□□□□ 0.85
TYMS-202ENST00000323250 CYP2C9P11712 490 aa20.37■□□□□ 0.85
TYMS-202ENST00000323250 CCND2P30279 289 aa20.37■□□□□ 0.85
TYMS-202ENST00000323250 JAKMIP1Q96N16 626 aaKnown RBP20.37■□□□□ 0.85
TYMS-202ENST00000323250 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.37■□□□□ 0.857e-8■■■□□ 17
TYMS-202ENST00000323250 COL6A3P12111 3177 aa20.37■□□□□ 0.85
TYMS-202ENST00000323250 CNTNAP5Q8WYK1 1306 aa20.36■□□□□ 0.85
TYMS-202ENST00000323250 KLF18A0A0U1RQI7 1052 aa20.36■□□□□ 0.85
TYMS-202ENST00000323250 PIK3CDO00329 1044 aa20.36■□□□□ 0.85
TYMS-202ENST00000323250 ZBTB43O43298 467 aa20.36■□□□□ 0.85
TYMS-202ENST00000323250 KPNA6O60684 536 aa20.36■□□□□ 0.85
TYMS-202ENST00000323250 ACRP10323 421 aa20.36■□□□□ 0.85
TYMS-202ENST00000323250 CDC27P30260 824 aa20.36■□□□□ 0.85
TYMS-202ENST00000323250 SEMA3FQ13275 785 aa20.36■□□□□ 0.85
TYMS-202ENST00000323250 BRDTQ58F21 947 aaPredicted RBP20.36■□□□□ 0.85
TYMS-202ENST00000323250 TYW1BQ6NUM6 668 aa20.36■□□□□ 0.85
TYMS-202ENST00000323250 GPR153Q6NV75 609 aa20.36■□□□□ 0.85
TYMS-202ENST00000323250 EMID1Q96A84 441 aaPredicted RBP20.36■□□□□ 0.85
TYMS-202ENST00000323250 VWCEQ96DN2 955 aa20.36■□□□□ 0.85
TYMS-202ENST00000323250 SEZ6LQ9BYH1 1024 aa20.36■□□□□ 0.85
TYMS-202ENST00000323250 WNT8AQ9H1J5 351 aa20.36■□□□□ 0.85
TYMS-202ENST00000323250 HIPK3Q9H422 1215 aa20.36■□□□□ 0.85
TYMS-202ENST00000323250 RTEL1Q9NZ71 1219 aa20.36■□□□□ 0.85
TYMS-202ENST00000323250 SCN10AQ9Y5Y9 1956 aa20.35■□□□□ 0.85
TYMS-202ENST00000323250 UBA1P22314 1058 aaKnown RBP20.35■□□□□ 0.85
TYMS-202ENST00000323250 CCL23P55773 120 aa20.35■□□□□ 0.85
TYMS-202ENST00000323250 CHMP4BP1P59074 171 aa20.35■□□□□ 0.85
TYMS-202ENST00000323250 UBE2SQ16763 222 aa20.35■□□□□ 0.85
TYMS-202ENST00000323250 RTN1Q16799 776 aa20.35■□□□□ 0.85
TYMS-202ENST00000323250 MYSM1Q5VVJ2 828 aa20.35■□□□□ 0.85
TYMS-202ENST00000323250 SYNE3Q6ZMZ3 975 aa20.35■□□□□ 0.85
TYMS-202ENST00000323250 Q6ZUG5 572 aa20.35■□□□□ 0.85
TYMS-202ENST00000323250 DEFB123Q8N688 67 aa20.35■□□□□ 0.85
TYMS-202ENST00000323250 SMARCC2Q8TAQ2 1214 aa20.35■□□□□ 0.85
TYMS-202ENST00000323250 PSTPIP2Q9H939 334 aa20.35■□□□□ 0.85
TYMS-202ENST00000323250 KIAA1217Q5T5P2 1943 aa20.35■□□□□ 0.85
TYMS-202ENST00000323250 RBAK-RBAKDNI3L0D1 243 aa20.34■□□□□ 0.85
TYMS-202ENST00000323250 HMGB1P09429 215 aaKnown RBP20.34■□□□□ 0.85
TYMS-202ENST00000323250 APOBRQ0VD83 1088 aa20.34■□□□□ 0.85
TYMS-202ENST00000323250 LAMC2Q13753 1193 aa20.34■□□□□ 0.85
TYMS-202ENST00000323250 HSDL1Q3SXM5 330 aa20.34■□□□□ 0.85
TYMS-202ENST00000323250 FAM47CQ5HY64 1035 aa20.34■□□□□ 0.85
TYMS-202ENST00000323250 TMEM240Q5SV17 173 aa20.34■□□□□ 0.85
TYMS-202ENST00000323250 CELF3Q5SZQ8 465 aaKnown RBP20.34■□□□□ 0.85
TYMS-202ENST00000323250 WWC2Q6AWC2 1192 aa20.34■□□□□ 0.85
TYMS-202ENST00000323250 NFRKBQ6P4R8 1299 aa20.34■□□□□ 0.85
TYMS-202ENST00000323250 HEATR3Q7Z4Q2 680 aa20.34■□□□□ 0.85
TYMS-202ENST00000323250 DHX37Q8IY37 1157 aaKnown RBP20.34■□□□□ 0.85
TYMS-202ENST00000323250 PPTC7Q8NI37 304 aa20.34■□□□□ 0.85
TYMS-202ENST00000323250 RNPC3Q96LT9 517 aaKnown RBP20.34■□□□□ 0.85
TYMS-202ENST00000323250 INPP4AQ96PE3 977 aaPredicted RBP20.34■□□□□ 0.85
TYMS-202ENST00000323250 CTAGE1Q96RT6 745 aa20.34■□□□□ 0.85
TYMS-202ENST00000323250 TELO2Q9Y4R8 837 aa20.34■□□□□ 0.85
TYMS-202ENST00000323250 V9GY48 417 aaPredicted RBP20.34■□□□□ 0.85
TYMS-202ENST00000323250 GOLGA8AA7E2F4 631 aa20.33■□□□□ 0.85
TYMS-202ENST00000323250 GOLGA8BA8MQT2 603 aa20.33■□□□□ 0.85
TYMS-202ENST00000323250 REC8O95072 547 aa20.33■□□□□ 0.85
TYMS-202ENST00000323250 GGPS1O95749 300 aa20.33■□□□□ 0.85
TYMS-202ENST00000323250 ADD1P35611 737 aaKnown RBP20.33■□□□□ 0.85
TYMS-202ENST00000323250 FAM109BQ6ICB4 259 aaPredicted RBP20.33■□□□□ 0.85
TYMS-202ENST00000323250 TMEM199Q8N511 208 aa20.33■□□□□ 0.85
TYMS-202ENST00000323250 BRF1Q92994 677 aa20.33■□□□□ 0.85
TYMS-202ENST00000323250 RBM28Q9NW13 759 aaKnown RBP20.33■□□□□ 0.85
TYMS-202ENST00000323250 SPATA31C2B4DYI2 1134 aa20.32■□□□□ 0.84
TYMS-202ENST00000323250 ZNF286BP0CG31 522 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms