RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 RABGAP1Q9Y3P9 1069 aa9.64□□□□□ -0.87
SSBP2-201ENST00000320672 STK10O94804 968 aaKnown RBP9.64□□□□□ -0.87
SSBP2-201ENST00000320672 TNNC2P02585 160 aa9.64□□□□□ -0.87
SSBP2-201ENST00000320672 CCDC125Q86Z20 511 aa9.64□□□□□ -0.87
SSBP2-201ENST00000320672 ZNF513Q8N8E2 541 aaPredicted RBP9.64□□□□□ -0.87
SSBP2-201ENST00000320672 TUBGCP2Q9BSJ2 902 aa9.64□□□□□ -0.87
SSBP2-201ENST00000320672 NR2F2P24468 414 aa9.64□□□□□ -0.87
SSBP2-201ENST00000320672 NLRP7Q8WX94 980 aa9.64□□□□□ -0.87
SSBP2-201ENST00000320672 HOOK2Q96ED9 719 aa9.64□□□□□ -0.87
SSBP2-201ENST00000320672 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.64□□□□□ -0.87
SSBP2-201ENST00000320672 EXOC3L4Q17RC7 722 aa9.64□□□□□ -0.87
SSBP2-201ENST00000320672 ZNF746Q6NUN9 644 aaPredicted RBP9.64□□□□□ -0.87
SSBP2-201ENST00000320672 DSCC1Q9BVC3 393 aa9.64□□□□□ -0.87
SSBP2-201ENST00000320672 ADCY9O60503 1353 aa9.64□□□□□ -0.87
SSBP2-201ENST00000320672 SARNPP82979 210 aaKnown RBP9.64□□□□□ -0.87
SSBP2-201ENST00000320672 E2F4Q16254 413 aa9.64□□□□□ -0.87
SSBP2-201ENST00000320672 C1orf112Q9NSG2 853 aa9.64□□□□□ -0.87
SSBP2-201ENST00000320672 CCDC195A0A1B0GUA6 201 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 PFKFB2O60825 505 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 SIRT2Q8IXJ6 389 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 NSUN7Q8NE18 718 aaKnown RBP9.63□□□□□ -0.87
SSBP2-201ENST00000320672 TTC7AQ9ULT0 858 aaPredicted RBP9.63□□□□□ -0.87
SSBP2-201ENST00000320672 TRPM2O94759 1503 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 PPP4R1Q8TF05 950 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 TCP11Q8WWU5 503 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 ATP8A2Q9NTI2 1148 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 NPHP3-ACAD11A0A0J9YXS1 232 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 MUM1Q2TAK8 710 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 IFT122Q9HBG6 1241 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 KLHL11Q9NVR0 708 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 SPECC1L-ADORA2AF8WAN1 911 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 TOM1L1O75674 476 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 ATF2P15336 505 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 C10orf76Q5T2E6 689 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 SWAP70Q9UH65 585 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 SFMBT1Q9UHJ3 866 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 MRPL42Q9Y6G3 142 aaKnown RBP9.63□□□□□ -0.87
SSBP2-201ENST00000320672 TMC4Q7Z404 712 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 PDZD8Q8NEN9 1154 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 KCNV2Q8TDN2 545 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 ERLEC1Q96DZ1 483 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 KMT5AQ9NQR1 393 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 EPN1Q9Y6I3 576 aaPredicted RBP9.63□□□□□ -0.87
SSBP2-201ENST00000320672 MKRN1Q9UHC7 482 aaKnown RBP9.63□□□□□ -0.87
SSBP2-201ENST00000320672 POTEMA6NI47 508 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 PRDX5P30044 214 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 BRDTQ58F21 947 aaPredicted RBP9.63□□□□□ -0.87
SSBP2-201ENST00000320672 CHURC1Q8WUH1 139 aa9.63□□□□□ -0.87
SSBP2-201ENST00000320672 LLPHQ9BRT6 129 aaKnown RBP9.63□□□□□ -0.87
SSBP2-201ENST00000320672 MYL3P08590 195 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 ZNF445P59923 1031 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 NSUN2Q08J23 767 aaKnown RBP eCLIP9.62□□□□□ -0.87
SSBP2-201ENST00000320672 PDCD6IPQ8WUM4 868 aaKnown RBP9.62□□□□□ -0.87
SSBP2-201ENST00000320672 CFAP57Q96MR6 1250 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 FAM118BQ9BPY3 351 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.62□□□□□ -0.87
SSBP2-201ENST00000320672 ALG13Q9NP73 1137 aaKnown RBP9.62□□□□□ -0.87
SSBP2-201ENST00000320672 UBN1Q9NPG3 1134 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 CHORDC1Q9UHD1 332 aaPredicted RBP9.62□□□□□ -0.87
SSBP2-201ENST00000320672 NOVA2Q9UNW9 492 aaKnown RBP9.62□□□□□ -0.87
SSBP2-201ENST00000320672 TEX14Q8IWB6 1497 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 ATXN3P54252 364 aaPredicted RBP9.62□□□□□ -0.87
SSBP2-201ENST00000320672 PEX3P56589 373 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 PSMC5P62195 406 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 CYB5R4Q7L1T6 521 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 NUP58Q9BVL2 599 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 GINM1Q9NU53 330 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 ERBB3P21860 1342 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 USP17L15C9J2P7 530 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 USP17L13C9JLJ4 530 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 USP17L11C9JVI0 530 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 USP17L18D6R9N7 530 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 USP17L22D6RA61 530 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 USP17L17D6RBQ6 530 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 USP17L19D6RCP7 530 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 USP17L20D6RJB6 530 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 E9PMD0 336 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 WDR46O15213 610 aaKnown RBP9.62□□□□□ -0.87
SSBP2-201ENST00000320672 PDE1BQ01064 536 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 MECOMQ03112 1051 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 USP17L24Q0WX57 530 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 USP17L6PQ6QN14 398 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 RSRC2Q7L4I2 434 aaKnown RBP9.62□□□□□ -0.87
SSBP2-201ENST00000320672 ATP6V1E2Q96A05 226 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 HACD3Q9P035 362 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 MDH1BQ5I0G3 518 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 CYFIP1Q7L576 1253 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 SSH3Q8TE77 659 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 USP27XA6NNY8 438 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 PDE8BO95263 885 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 EIF4A3P38919 411 aaKnown RBP9.62□□□□□ -0.87
SSBP2-201ENST00000320672 DHX9Q08211 1270 aaKnown RBP9.62□□□□□ -0.87
SSBP2-201ENST00000320672 PPP2R5EQ16537 467 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 MMEL1Q495T6 779 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 APOA5Q6Q788 366 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 ZBTB8OSQ8IWT0 167 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 WHAMMQ8TF30 809 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 ATXN7L3BQ96GX2 97 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 KCNQ2O43526 872 aa9.62□□□□□ -0.87
SSBP2-201ENST00000320672 KRT1P04264 644 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms