RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 CDHR2Q9BYE9 1310 aa8.28□□□□□ -1.08
CDHR3-201ENST00000317716 SMIM24O75264 130 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 TCIRG1Q13488 830 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 HERC4Q5GLZ8 1057 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-201ENST00000317716 RDH13Q8NBN7 331 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 CCDC197Q8NCU1 140 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 CCDC26Q8TAB7 109 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 KLHL29Q96CT2 875 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 NLRP3Q96P20 1036 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 NUP58Q9BVL2 599 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 RBM12Q9NTZ6 932 aaKnown RBP8.27□□□□□ -1.09
CDHR3-201ENST00000317716 HPS5Q9UPZ3 1129 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.27□□□□□ -1.09
CDHR3-201ENST00000317716 AHDC1Q5TGY3 1603 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-201ENST00000317716 PALMO75781 387 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 PPP1R37O75864 691 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 POLE2P56282 527 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 ERFEQ4G0M1 354 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 KRT79Q5XKE5 535 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 ZSCAN29Q8IWY8 852 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-201ENST00000317716 PARP9Q8IXQ6 854 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 LCORLQ8N3X6 602 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 TAB3Q8N5C8 712 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-201ENST00000317716 FAM133AQ8N9E0 248 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 SPATA5Q8NB90 893 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 HVCN1Q96D96 273 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 GPR101Q96P66 508 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-201ENST00000317716 RAB34Q9BZG1 259 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 TAOK3Q9H2K8 898 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 INTS9Q9NV88 658 aaKnown RBP8.27□□□□□ -1.09
CDHR3-201ENST00000317716 BABAM1Q9NWV8 329 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 TBK1Q9UHD2 729 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 FBXO2Q9UK22 296 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-201ENST00000317716 BCS1LQ9Y276 419 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 IFNAR1P17181 557 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 POLD1P28340 1107 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 MCAMP43121 646 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 ARHGAP44Q17R89 818 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 TSGA10IPQ3SY00 556 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 SUSD4Q5VX71 490 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 DENND2CQ68D51 928 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 COL23A1Q86Y22 540 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-201ENST00000317716 CRACR2BQ8N4Y2 399 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-201ENST00000317716 MDM1Q8TC05 714 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 SNX29Q8TEQ0 813 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 SLC40A1Q9NP59 571 aa8.27□□□□□ -1.09
CDHR3-201ENST00000317716 TRPM3Q9HCF6 1732 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-201ENST00000317716 MAP2K7O14733 419 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 CALML3P27482 149 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 SLC8A1P32418 973 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 NKX1-1Q15270 411 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-201ENST00000317716 FAM47EQ6ZV65 393 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 KIF2BQ8N4N8 673 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 FOXP1Q9H334 677 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-201ENST00000317716 BIN2Q9UBW5 565 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-201ENST00000317716 RTL9Q8NET4 1388 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 ALS2Q96Q42 1657 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 TNS2Q63HR2 1409 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 NMT2O60551 498 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 SERPINB2P05120 415 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 DYNLL1P63167 89 aaKnown RBP8.26□□□□□ -1.09
CDHR3-201ENST00000317716 ZBED6P86452 979 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 ZRSR2Q15696 482 aaKnown RBP8.26□□□□□ -1.09
CDHR3-201ENST00000317716 IFI16Q16666 785 aaKnown RBP8.26□□□□□ -1.09
CDHR3-201ENST00000317716 MSANTD4Q8NCY6 345 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 STAG1Q8WVM7 1258 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 HNRNPLLQ8WVV9 542 aaKnown RBP8.26□□□□□ -1.09
CDHR3-201ENST00000317716 ADAM33Q9BZ11 813 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 INTUQ9ULD6 942 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 LRRC53A6NM62 1247 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 FANCGO15287 622 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 RPS6KA4O75676 772 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 CHRNA5P30532 468 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 IL6STP40189 918 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-201ENST00000317716 UAP1Q16222 522 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-201ENST00000317716 CCDC152Q4G0S7 254 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 ZNF658Q5TYW1 1059 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-201ENST00000317716 EMBQ6PCB8 327 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 CCDC50Q8IVM0 306 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 ASIC3Q9UHC3 531 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 RWDD2AQ9UIY3 292 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 PCDHB13Q9Y5F0 798 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 USH1CQ9Y6N9 552 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 MAP3K15Q6ZN16 1313 aa8.26□□□□□ -1.09
CDHR3-201ENST00000317716 HIP1RO75146 1068 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 SLC1A4P43007 532 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 GYG1P46976 350 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 TAF11Q15544 211 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 CNNM4Q6P4Q7 775 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 INTS5Q6P9B9 1019 aaKnown RBP8.25□□□□□ -1.09
CDHR3-201ENST00000317716 ZNF449Q6P9G9 518 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 CCDC13Q8IYE1 715 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 CCDC105Q8IYK2 499 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 PROM2Q8N271 834 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 MTRF1LQ9UGC7 380 aaKnown RBP8.25□□□□□ -1.09
CDHR3-201ENST00000317716 SWAP70Q9UH65 585 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 CAPN6Q9Y6Q1 641 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 CEMIPQ8WUJ3 1361 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 GMNCA6NCL1 334 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 DIAPH2O60879 1101 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms