RNA–Protein interactions for RNA: ENST00000317555.6

PGAM5-201, Transcript of PGAM family member 5, mitochondrial serine/threonine protein phosphatase, humanhuman

TSL 1 (best) BASIC

Gene PGAM5, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5-201ENST00000317555 VSIG10LQ86VR7 867 aa30.9■■■□□ 2.54
PGAM5-201ENST00000317555 TCEANC2Q96MN5 208 aa30.9■■■□□ 2.54
PGAM5-201ENST00000317555 PPP1R12CQ9BZL4 782 aa30.9■■■□□ 2.54
PGAM5-201ENST00000317555 DDX41Q9UJV9 622 aaKnown RBP30.9■■■□□ 2.54
PGAM5-201ENST00000317555 HMGB1P09429 215 aaKnown RBP30.89■■■□□ 2.54
PGAM5-201ENST00000317555 EPHB4P54760 987 aa30.89■■■□□ 2.54
PGAM5-201ENST00000317555 ARHGAP1Q07960 439 aa30.89■■■□□ 2.54
PGAM5-201ENST00000317555 TMTC3Q6ZXV5 915 aa30.89■■■□□ 2.54
PGAM5-201ENST00000317555 TRPV6Q9H1D0 765 aa30.89■■■□□ 2.54
PGAM5-201ENST00000317555 B4GALT4O60513 344 aa30.88■■■□□ 2.53
PGAM5-201ENST00000317555 CCND2P30279 289 aa30.88■■■□□ 2.53
PGAM5-201ENST00000317555 APOA5Q6Q788 366 aa30.88■■■□□ 2.53
PGAM5-201ENST00000317555 IL31RAQ8NI17 732 aa30.88■■■□□ 2.53
PGAM5-201ENST00000317555 AFG1LQ8WV93 481 aa30.88■■■□□ 2.53
PGAM5-201ENST00000317555 ALDH8A1Q9H2A2 487 aaPredicted RBP30.88■■■□□ 2.53
PGAM5-201ENST00000317555 MMP3P08254 477 aa30.87■■■□□ 2.53
PGAM5-201ENST00000317555 KCNV1Q6PIU1 500 aa30.87■■■□□ 2.53
PGAM5-201ENST00000317555 CCDC82Q8N4S0 544 aa30.87■■■□□ 2.53
PGAM5-201ENST00000317555 TMEM199Q8N511 208 aa30.87■■■□□ 2.53
PGAM5-201ENST00000317555 CUL5Q93034 780 aa30.87■■■□□ 2.53
PGAM5-201ENST00000317555 RGS20O76081 388 aa30.86■■■□□ 2.53
PGAM5-201ENST00000317555 REC8O95072 547 aa30.86■■■□□ 2.53
PGAM5-201ENST00000317555 PPIGQ13427 754 aaKnown RBP eCLIP30.86■■■□□ 2.53
PGAM5-201ENST00000317555 NBPF20Q3BBV1 942 aa30.86■■■□□ 2.53
PGAM5-201ENST00000317555 SMARCC2Q8TAQ2 1214 aa30.86■■■□□ 2.53
PGAM5-201ENST00000317555 HIPK3Q9H422 1215 aa30.86■■■□□ 2.53
PGAM5-201ENST00000317555 RBM28Q9NW13 759 aaKnown RBP30.86■■■□□ 2.53
PGAM5-201ENST00000317555 HSPA4P34932 840 aa30.85■■■□□ 2.53
PGAM5-201ENST00000317555 FAM47CQ5HY64 1035 aa30.85■■■□□ 2.53
PGAM5-201ENST00000317555 KCNB2Q92953 911 aa30.85■■■□□ 2.53
PGAM5-201ENST00000317555 EMID1Q96A84 441 aaPredicted RBP30.85■■■□□ 2.53
PGAM5-201ENST00000317555 RNPC3Q96LT9 517 aaKnown RBP30.85■■■□□ 2.53
PGAM5-201ENST00000317555 BRPF3Q9ULD4 1205 aa30.85■■■□□ 2.53
PGAM5-201ENST00000317555 FRMPD4Q14CM0 1322 aa30.84■■■□□ 2.53
PGAM5-201ENST00000317555 ZBTB43O43298 467 aa30.84■■■□□ 2.53
PGAM5-201ENST00000317555 SUPT20HL2P0C7V6 817 aa30.84■■■□□ 2.53
PGAM5-201ENST00000317555 CYP2C18P33260 490 aa30.84■■■□□ 2.53
PGAM5-201ENST00000317555 LAMC2Q13753 1193 aa30.84■■■□□ 2.53
PGAM5-201ENST00000317555 NFRKBQ6P4R8 1299 aa30.84■■■□□ 2.53
PGAM5-201ENST00000317555 DHX37Q8IY37 1157 aaKnown RBP30.84■■■□□ 2.53
PGAM5-201ENST00000317555 DEFB123Q8N688 67 aa30.84■■■□□ 2.53
PGAM5-201ENST00000317555 TRMT13Q9NUP7 481 aaKnown RBP30.84■■■□□ 2.53
PGAM5-201ENST00000317555 hCG_1642624A0A1W2PR95 340 aa30.83■■■□□ 2.53
PGAM5-201ENST00000317555 PIK3CDO00329 1044 aa30.83■■■□□ 2.53
PGAM5-201ENST00000317555 CSF2RAP15509 400 aa30.83■■■□□ 2.53
PGAM5-201ENST00000317555 CASTP20810 708 aaKnown RBP30.83■■■□□ 2.53
PGAM5-201ENST00000317555 FGD1P98174 961 aa30.83■■■□□ 2.53
PGAM5-201ENST00000317555 RTN1Q16799 776 aa30.83■■■□□ 2.53
PGAM5-201ENST00000317555 USP17L6PQ6QN14 398 aa30.83■■■□□ 2.53
PGAM5-201ENST00000317555 ZFP91Q96JP5 570 aaPredicted RBP30.83■■■□□ 2.53
PGAM5-201ENST00000317555 NOC4LQ9BVI4 516 aaKnown RBP30.83■■■□□ 2.53
PGAM5-201ENST00000317555 PPP4R2Q9NY27 417 aa30.83■■■□□ 2.53
PGAM5-201ENST00000317555 MEIS2O14770 477 aa30.82■■■□□ 2.52
PGAM5-201ENST00000317555 PTPN11Q06124 597 aaPredicted RBP30.82■■■□□ 2.52
PGAM5-201ENST00000317555 DGKDQ16760 1214 aa30.82■■■□□ 2.52
PGAM5-201ENST00000317555 JAKMIP1Q96N16 626 aaKnown RBP30.82■■■□□ 2.52
PGAM5-201ENST00000317555 PSTPIP2Q9H939 334 aa30.82■■■□□ 2.52
PGAM5-201ENST00000317555 SNX14Q9Y5W7 946 aa30.82■■■□□ 2.52
PGAM5-201ENST00000317555 UMODL1Q5DID0 1318 aa30.81■■■□□ 2.52
PGAM5-201ENST00000317555 KLF18A0A0U1RQI7 1052 aa30.81■■■□□ 2.52
PGAM5-201ENST00000317555 STAM2O75886 525 aa30.81■■■□□ 2.52
PGAM5-201ENST00000317555 TGFB3P10600 412 aa30.81■■■□□ 2.52
PGAM5-201ENST00000317555 CHMP4BP1P59074 171 aa30.81■■■□□ 2.52
PGAM5-201ENST00000317555 ERICH6BQ5W0A0 696 aa30.81■■■□□ 2.52
PGAM5-201ENST00000317555 Q7L0L9 218 aa30.81■■■□□ 2.52
PGAM5-201ENST00000317555 PPTC7Q8NI37 304 aa30.81■■■□□ 2.52
PGAM5-201ENST00000317555 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.81■■■□□ 2.524e-6■□□□□ 8
PGAM5-201ENST00000317555 CNTNAP5Q8WYK1 1306 aa30.8■■■□□ 2.52
PGAM5-201ENST00000317555 CPA1P15085 419 aa30.8■■■□□ 2.52
PGAM5-201ENST00000317555 GNPTABQ3T906 1256 aa30.8■■■□□ 2.52
PGAM5-201ENST00000317555 CELF3Q5SZQ8 465 aaKnown RBP30.8■■■□□ 2.52
PGAM5-201ENST00000317555 BLOC1S2Q6QNY1 142 aa30.8■■■□□ 2.52
PGAM5-201ENST00000317555 HEATR3Q7Z4Q2 680 aa30.8■■■□□ 2.52
PGAM5-201ENST00000317555 GOLGA8AA7E2F4 631 aa30.79■■■□□ 2.52
PGAM5-201ENST00000317555 GOLGA8BA8MQT2 603 aa30.79■■■□□ 2.52
PGAM5-201ENST00000317555 GGPS1O95749 300 aa30.79■■■□□ 2.52
PGAM5-201ENST00000317555 UBA1P22314 1058 aaKnown RBP30.79■■■□□ 2.52
PGAM5-201ENST00000317555 RCAN1P53805 252 aa30.79■■■□□ 2.52
PGAM5-201ENST00000317555 MRPS9P82933 396 aaKnown RBP30.79■■■□□ 2.52
PGAM5-201ENST00000317555 SMAD3P84022 425 aaKnown RBP30.79■■■□□ 2.52
PGAM5-201ENST00000317555 MYSM1Q5VVJ2 828 aa30.79■■■□□ 2.52
PGAM5-201ENST00000317555 PPP1R13LQ8WUF5 828 aa30.79■■■□□ 2.52
PGAM5-201ENST00000317555 NAP1L2Q9ULW6 460 aaPredicted RBP30.79■■■□□ 2.52
PGAM5-201ENST00000317555 CYP2C9P11712 490 aa30.78■■■□□ 2.52
PGAM5-201ENST00000317555 CCL23P55773 120 aa30.78■■■□□ 2.52
PGAM5-201ENST00000317555 FAM109BQ6ICB4 259 aaPredicted RBP30.78■■■□□ 2.52
PGAM5-201ENST00000317555 PSRC1Q6PGN9 363 aaPredicted RBP30.78■■■□□ 2.52
PGAM5-201ENST00000317555 C16orf59Q7L2K0 433 aa30.78■■■□□ 2.52
PGAM5-201ENST00000317555 KAT2BQ92831 832 aa30.78■■■□□ 2.52
PGAM5-201ENST00000317555 GPKOWQ92917 476 aaPredicted RBP eCLIP30.78■■■□□ 2.52
PGAM5-201ENST00000317555 SPATA33Q96N06 139 aa30.78■■■□□ 2.52
PGAM5-201ENST00000317555 INPP4AQ96PE3 977 aaPredicted RBP30.78■■■□□ 2.52
PGAM5-201ENST00000317555 IL23AQ9NPF7 189 aa30.78■■■□□ 2.52
PGAM5-201ENST00000317555 SORBS3O60504 671 aa30.77■■■□□ 2.52
PGAM5-201ENST00000317555 ACRP10323 421 aa30.77■■■□□ 2.52
PGAM5-201ENST00000317555 SP2Q02086 613 aa30.77■■■□□ 2.52
PGAM5-201ENST00000317555 TMEM240Q5SV17 173 aa30.77■■■□□ 2.52
PGAM5-201ENST00000317555 PCNX4Q63HM2 1172 aa30.77■■■□□ 2.52
PGAM5-201ENST00000317555 XRRA1Q6P2D8 792 aa30.77■■■□□ 2.52
PGAM5-201ENST00000317555 Q6ZUG5 572 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms