RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 JAKMIP2Q96AA8 810 aa21.76■■□□□ 1.07
AP3S1-201ENST00000316788 CDK5RAP3Q96JB5 506 aa21.76■■□□□ 1.07
AP3S1-201ENST00000316788 EDEM3Q9BZQ6 932 aa21.76■■□□□ 1.07
AP3S1-201ENST00000316788 UBA5Q9GZZ9 404 aa21.76■■□□□ 1.07
AP3S1-201ENST00000316788 NHEJ1Q9H9Q4 299 aaPredicted RBP21.76■■□□□ 1.07
AP3S1-201ENST00000316788 VAT1LQ9HCJ6 419 aa21.76■■□□□ 1.07
AP3S1-201ENST00000316788 TMEM260Q9NX78 707 aa21.76■■□□□ 1.07
AP3S1-201ENST00000316788 CD2APQ9Y5K6 639 aa21.76■■□□□ 1.07
AP3S1-201ENST00000316788 MYH8P13535 1937 aa21.76■■□□□ 1.07
AP3S1-201ENST00000316788 MYMKA6NI61 221 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 EDIL3O43854 480 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 GPS2Q13227 327 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 MAN2A1Q16706 1144 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 VWA3BQ502W6 1294 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 GPATCH4Q5T3I0 446 aaKnown RBP21.75■■□□□ 1.07
AP3S1-201ENST00000316788 KRT79Q5XKE5 535 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 KIAA1328Q86T90 577 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 CCDC84Q86UT8 332 aaPredicted RBP21.75■■□□□ 1.07
AP3S1-201ENST00000316788 MTMR8Q96EF0 704 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 PNKPQ96T60 521 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 GLT8D2Q9H1C3 349 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 ZSWIM4Q9H7M6 989 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.75■■□□□ 1.07
AP3S1-201ENST00000316788 L1RE1Q9UN81 338 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 HYIQ5T013 277 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 AGPAT5Q9NUQ2 364 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 PLAGL2Q9UPG8 496 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 SIK3Q9Y2K2 1263 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 SAR1BQ9Y6B6 198 aa21.75■■□□□ 1.07
AP3S1-201ENST00000316788 EIF3JO75822 258 aaKnown RBP21.74■■□□□ 1.07
AP3S1-201ENST00000316788 AKR1B1P15121 316 aa21.74■■□□□ 1.07
AP3S1-201ENST00000316788 NPR1P16066 1061 aa21.74■■□□□ 1.07
AP3S1-201ENST00000316788 VAV2P52735 878 aa21.74■■□□□ 1.07
AP3S1-201ENST00000316788 MASTLQ96GX5 879 aa21.74■■□□□ 1.07
AP3S1-201ENST00000316788 SYT17Q9BSW7 474 aa21.74■■□□□ 1.07
AP3S1-201ENST00000316788 JMJD4Q9H9V9 463 aa21.74■■□□□ 1.07
AP3S1-201ENST00000316788 SLC37A4O43826 429 aa21.73■■□□□ 1.07
AP3S1-201ENST00000316788 LCA5LO95447 670 aa21.73■■□□□ 1.07
AP3S1-201ENST00000316788 TGFB2P61812 414 aa21.73■■□□□ 1.07
AP3S1-201ENST00000316788 MCM6Q14566 821 aa21.73■■□□□ 1.07
AP3S1-201ENST00000316788 PSD3Q9NYI0 1048 aa21.73■■□□□ 1.07
AP3S1-201ENST00000316788 SERPINB13Q9UIV8 391 aa21.73■■□□□ 1.07
AP3S1-201ENST00000316788 FRMPD2Q68DX3 1309 aaPredicted RBP21.73■■□□□ 1.07
AP3S1-201ENST00000316788 TARSL2A2RTX5 802 aaKnown RBP21.72■■□□□ 1.07
AP3S1-201ENST00000316788 C6orf229H3BNL8 230 aa21.72■■□□□ 1.07
AP3S1-201ENST00000316788 TDP2O95551 362 aa21.72■■□□□ 1.07
AP3S1-201ENST00000316788 MRPL12P52815 198 aaKnown RBP21.72■■□□□ 1.07
AP3S1-201ENST00000316788 SNX29Q8TEQ0 813 aa21.72■■□□□ 1.07
AP3S1-201ENST00000316788 CUL5Q93034 780 aa21.72■■□□□ 1.07
AP3S1-201ENST00000316788 COA7Q96BR5 231 aa21.72■■□□□ 1.07
AP3S1-201ENST00000316788 EHD4Q9H223 541 aa21.72■■□□□ 1.07
AP3S1-201ENST00000316788 NDST4Q9H3R1 872 aa21.72■■□□□ 1.07
AP3S1-201ENST00000316788 TRIM10Q9UDY6 481 aa21.72■■□□□ 1.07
AP3S1-201ENST00000316788 KDM3AQ9Y4C1 1321 aa21.72■■□□□ 1.07
AP3S1-201ENST00000316788 GREB1LQ9C091 1923 aaPredicted RBP21.72■■□□□ 1.07
AP3S1-201ENST00000316788 PPEF1O14829 653 aaPredicted RBP21.72■■□□□ 1.07
AP3S1-201ENST00000316788 GTF2IP78347 998 aa21.72■■□□□ 1.07
AP3S1-201ENST00000316788 DPP8Q6V1X1 898 aaPredicted RBP21.72■■□□□ 1.07
AP3S1-201ENST00000316788 PCMTD1Q96MG8 357 aaPredicted RBP21.72■■□□□ 1.07
AP3S1-201ENST00000316788 TSG101Q99816 390 aa21.72■■□□□ 1.07
AP3S1-201ENST00000316788 SLC39A2Q9NP94 309 aa21.72■■□□□ 1.07
AP3S1-201ENST00000316788 ATP6V0A2Q9Y487 856 aa21.72■■□□□ 1.07
AP3S1-201ENST00000316788 USP14P54578 494 aa21.71■■□□□ 1.07
AP3S1-201ENST00000316788 KIF5AQ12840 1032 aa21.71■■□□□ 1.07
AP3S1-201ENST00000316788 SPA17Q15506 151 aa21.71■■□□□ 1.07
AP3S1-201ENST00000316788 HHIPL2Q6UWX4 724 aa21.71■■□□□ 1.07
AP3S1-201ENST00000316788 LRRC55Q6ZSA7 311 aa21.71■■□□□ 1.07
AP3S1-201ENST00000316788 ADGRF4Q8IZF3 695 aa21.71■■□□□ 1.07
AP3S1-201ENST00000316788 LRRC47Q8N1G4 583 aaKnown RBP21.71■■□□□ 1.07
AP3S1-201ENST00000316788 CCDC17Q96LX7 622 aa21.71■■□□□ 1.07
AP3S1-201ENST00000316788 ABCB6Q9NP58 842 aa21.71■■□□□ 1.07
AP3S1-201ENST00000316788 ZNF219Q9P2Y4 722 aaPredicted RBP21.71■■□□□ 1.07
AP3S1-201ENST00000316788 ATP1A1P05023 1023 aaKnown RBP21.7■■□□□ 1.06
AP3S1-201ENST00000316788 SHMT1P34896 483 aa21.7■■□□□ 1.06
AP3S1-201ENST00000316788 VSNL1P62760 191 aa21.7■■□□□ 1.06
AP3S1-201ENST00000316788 STYK1Q6J9G0 422 aa21.7■■□□□ 1.06
AP3S1-201ENST00000316788 TXLNBQ8N3L3 684 aa21.7■■□□□ 1.06
AP3S1-201ENST00000316788 CCDC42Q96M95 316 aa21.7■■□□□ 1.06
AP3S1-201ENST00000316788 NT5C3AQ9H0P0 336 aa21.7■■□□□ 1.06
AP3S1-201ENST00000316788 ACBD3Q9H3P7 528 aa21.7■■□□□ 1.06
AP3S1-201ENST00000316788 ZBTB5O15062 677 aa21.69■■□□□ 1.06
AP3S1-201ENST00000316788 USO1O60763 962 aaKnown RBP21.69■■□□□ 1.06
AP3S1-201ENST00000316788 PRLRP16471 622 aa21.69■■□□□ 1.06
AP3S1-201ENST00000316788 KLK7P49862 253 aa21.69■■□□□ 1.06
AP3S1-201ENST00000316788 MCTP2Q6DN12 878 aa21.69■■□□□ 1.06
AP3S1-201ENST00000316788 NCAPH2Q6IBW4 605 aa21.69■■□□□ 1.06
AP3S1-201ENST00000316788 IQCEQ6IPM2 695 aa21.69■■□□□ 1.06
AP3S1-201ENST00000316788 NOA1Q8NC60 698 aaKnown RBP21.69■■□□□ 1.06
AP3S1-201ENST00000316788 TRIM58Q8NG06 486 aa21.69■■□□□ 1.06
AP3S1-201ENST00000316788 RUBCNQ92622 972 aa21.69■■□□□ 1.06
AP3S1-201ENST00000316788 EXOC4Q96A65 974 aa21.69■■□□□ 1.06
AP3S1-201ENST00000316788 VIPAS39Q9H9C1 493 aa21.69■■□□□ 1.06
AP3S1-201ENST00000316788 DDX25Q9UHL0 483 aaKnown RBP21.69■■□□□ 1.06
AP3S1-201ENST00000316788 POLR3GO15318 223 aaPredicted RBP21.69■■□□□ 1.06
AP3S1-201ENST00000316788 HLA-DOAP06340 250 aa21.69■■□□□ 1.06
AP3S1-201ENST00000316788 ITIH3Q06033 890 aa21.69■■□□□ 1.06
AP3S1-201ENST00000316788 ZCWPW2Q504Y3 356 aa21.69■■□□□ 1.06
AP3S1-201ENST00000316788 MOXD1Q6UVY6 613 aa21.69■■□□□ 1.06
AP3S1-201ENST00000316788 ZNF572Q7Z3I7 529 aaPredicted RBP21.69■■□□□ 1.06
AP3S1-201ENST00000316788 DDX12PQ92771 950 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms