RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 TCEAL9Q9UHQ7 104 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 APOBEC2Q9Y235 224 aaKnown RBP5.39□□□□□ -1.55
SMCO3-201ENST00000316048 TNKSO95271 1327 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 SOGA1O94964 1423 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 SSU72P8A0A1W2PR75 194 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 PTPDC1A2A3K4 754 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 AKAP10O43572 662 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 ITGB2P05107 769 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 GATA4P43694 442 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 TBX4P57082 545 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 TEKQ02763 1124 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 KIZQ2M2Z5 673 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 WAPLQ7Z5K2 1190 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 ANKLE2Q86XL3 938 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 CREG2Q8IUH2 290 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 HOOK2Q96ED9 719 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 DBNDD2Q9BQY9 259 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 OSBPL1AQ9BXW6 950 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 RTFDC1Q9BY42 306 aaPredicted RBP5.39□□□□□ -1.55
SMCO3-201ENST00000316048 MS4A5Q9H3V2 200 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 GAS7O60861 476 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 CD96P40200 585 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 IARSP41252 1262 aaKnown RBP5.38□□□□□ -1.55
SMCO3-201ENST00000316048 EGR3Q06889 387 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 SART3Q15020 963 aaKnown RBP5.38□□□□□ -1.55
SMCO3-201ENST00000316048 PPP2R5AQ15172 486 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 ATP13A4Q4VNC1 1196 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 ALYREFQ86V81 257 aaKnown RBP5.38□□□□□ -1.55
SMCO3-201ENST00000316048 CBARPQ8N350 705 aaPredicted RBP5.38□□□□□ -1.55
SMCO3-201ENST00000316048 GULP1Q9UBP9 304 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 B4GALT6Q9UBX8 382 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 PITPNM2Q9BZ72 1349 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 SYNJ1O43426 1573 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 PRPF3O43395 683 aaKnown RBP5.38□□□□□ -1.55
SMCO3-201ENST00000316048 ZEB2O60315 1214 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 PPP1R11O60927 126 aaPredicted RBP5.38□□□□□ -1.55
SMCO3-201ENST00000316048 KRT37O76014 449 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 SYDE2Q5VT97 1194 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 HDGFL2Q7Z4V5 671 aaPredicted RBP5.38□□□□□ -1.55
SMCO3-201ENST00000316048 TEX2Q8IWB9 1127 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 CMIPQ8IY22 773 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 CABP5Q9NP86 173 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 CLDND1Q9NY35 253 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 FBLN5Q9UBX5 448 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 ZC3H7BQ9UGR2 993 aaKnown RBP5.38□□□□□ -1.55
SMCO3-201ENST00000316048 EBF1Q9UH73 591 aa5.38□□□□□ -1.55
SMCO3-201ENST00000316048 WNT9AO14904 365 aa5.37□□□□□ -1.55
SMCO3-201ENST00000316048 PDE6AP16499 860 aa5.37□□□□□ -1.55
SMCO3-201ENST00000316048 NAT1P18440 290 aa5.37□□□□□ -1.55
SMCO3-201ENST00000316048 CLCN7P51798 805 aa5.37□□□□□ -1.55
SMCO3-201ENST00000316048 IQSEC1Q6DN90 963 aa5.37□□□□□ -1.55
SMCO3-201ENST00000316048 RNF111Q6ZNA4 994 aa5.37□□□□□ -1.55
SMCO3-201ENST00000316048 CLRN3Q8NCR9 226 aa5.37□□□□□ -1.55
SMCO3-201ENST00000316048 FBXW5Q969U6 566 aa5.37□□□□□ -1.55
SMCO3-201ENST00000316048 PUS7LQ9H0K6 701 aaKnown RBP5.37□□□□□ -1.55
SMCO3-201ENST00000316048 SMURF1Q9HCE7 757 aa5.37□□□□□ -1.55
SMCO3-201ENST00000316048 AASDHPPTQ9NRN7 309 aa5.37□□□□□ -1.55
SMCO3-201ENST00000316048 CATSPERZQ9NTU4 200 aa5.37□□□□□ -1.55
SMCO3-201ENST00000316048 ZKSCAN5Q9Y2L8 839 aa5.37□□□□□ -1.55
SMCO3-201ENST00000316048 TOP2BQ02880 1626 aa5.37□□□□□ -1.55
SMCO3-201ENST00000316048 CCDC194A0A1B0GVG4 234 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 TCRBV5S4A2TA0A5A2 114 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 LCHNA4D1U4 455 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 MT-CO1P00395 513 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 COL6A2P12110 1019 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 KRT15P19012 456 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 JAM2P57087 298 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 ERVK-21P61565 698 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 ST5P78524 1137 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 INSM1Q01101 510 aaPredicted RBP5.36□□□□□ -1.55
SMCO3-201ENST00000316048 PIN1Q13526 163 aaPredicted RBP5.36□□□□□ -1.55
SMCO3-201ENST00000316048 FAM47CQ5HY64 1035 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 IQCEQ6IPM2 695 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 THAP5Q7Z6K1 395 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 OSTM1Q86WC4 334 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 KIF18BQ86Y91 864 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 OXSMQ9NWU1 459 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 NOB1Q9ULX3 412 aaKnown RBP5.36□□□□□ -1.55
SMCO3-201ENST00000316048 TIMM13Q9Y5L4 95 aaPredicted RBP5.36□□□□□ -1.55
SMCO3-201ENST00000316048 FAM47E-STBD1D6RA91 191 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 TGM5O43548 720 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 AMY2AP04746 511 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 AMY2BP19961 511 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 HOXA10P31260 410 aaPredicted RBP5.36□□□□□ -1.55
SMCO3-201ENST00000316048 LSSP48449 732 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 LSAMPQ13449 338 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 C14orf80Q86SX3 495 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 ZBTB46Q86UZ6 589 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 C2orf69Q8N8R5 385 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 METTL22Q9BUU2 404 aaPredicted RBP5.36□□□□□ -1.55
SMCO3-201ENST00000316048 PCGF6Q9BYE7 350 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 MKNK2Q9HBH9 465 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 ATG3Q9NT62 314 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 MARCH2Q9P0N8 246 aa5.36□□□□□ -1.55
SMCO3-201ENST00000316048 BIVM-ERCC5R4GMW8 1640 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 RUSC2Q8N2Y8 1516 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 ZNF561-AS1K7EIQ3 104 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 NKRFO15226 690 aaKnown RBP eCLIP5.35□□□□□ -1.55
SMCO3-201ENST00000316048 CYP26A1O43174 497 aa5.35□□□□□ -1.55
SMCO3-201ENST00000316048 IGLV1-40P01703 118 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms