RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 CDHR2Q9BYE9 1310 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 CHGBP05060 677 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 FERP16591 822 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 XPAP23025 273 aaPredicted RBP9.91□□□□□ -0.82
CTC1-201ENST00000315684 ANXA13P27216 316 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 COG2Q14746 738 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 SEL1L2Q5TEA6 688 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 IFT81Q8WYA0 676 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 CHAMP1Q96JM3 812 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 LSG1Q9H089 658 aaKnown RBP9.91□□□□□ -0.82
CTC1-201ENST00000315684 OSBPL5Q9H0X9 879 aaPredicted RBP9.91□□□□□ -0.82
CTC1-201ENST00000315684 ZNF302Q9NR11 478 aa9.91□□□□□ -0.82
CTC1-201ENST00000315684 XRCC5P13010 732 aaKnown RBP9.9□□□□□ -0.82
CTC1-201ENST00000315684 GPRC5AQ8NFJ5 357 aa9.9□□□□□ -0.82
CTC1-201ENST00000315684 IQCGQ9H095 443 aaKnown RBP9.9□□□□□ -0.82
CTC1-201ENST00000315684 ABCF3Q9NUQ8 709 aa9.9□□□□□ -0.82
CTC1-201ENST00000315684 GABBR1Q9UBS5 961 aa9.9□□□□□ -0.82
CTC1-201ENST00000315684 ODF2LQ9ULJ1 636 aa9.9□□□□□ -0.82
CTC1-201ENST00000315684 SLC9C1Q4G0N8 1177 aa9.9□□□□□ -0.82
CTC1-201ENST00000315684 GNASQ5JWF2 1037 aa9.9□□□□□ -0.82
CTC1-201ENST00000315684 IGSF22Q8N9C0 903 aa9.9□□□□□ -0.82
CTC1-201ENST00000315684 RPF1Q9H9Y2 349 aaKnown RBP9.9□□□□□ -0.82
CTC1-201ENST00000315684 COL4A3BPQ9Y5P4 624 aa9.9□□□□□ -0.82
CTC1-201ENST00000315684 SH2B2O14492 632 aaPredicted RBP9.9□□□□□ -0.82
CTC1-201ENST00000315684 ZNF569Q5MCW4 686 aa9.9□□□□□ -0.82
CTC1-201ENST00000315684 RRAGAQ7L523 313 aa9.9□□□□□ -0.82
CTC1-201ENST00000315684 SMYD4Q8IYR2 804 aaPredicted RBP9.9□□□□□ -0.82
CTC1-201ENST00000315684 GRAMD1CQ8IYS0 662 aa9.9□□□□□ -0.82
CTC1-201ENST00000315684 ELMOD1Q8N336 334 aa9.9□□□□□ -0.82
CTC1-201ENST00000315684 LMBR1Q8WVP7 490 aa9.9□□□□□ -0.82
CTC1-201ENST00000315684 PPP2R5AQ15172 486 aa9.9□□□□□ -0.82
CTC1-201ENST00000315684 MST1RQ04912 1400 aa9.9□□□□□ -0.82
CTC1-201ENST00000315684 UQCRHLA0A096LP55 91 aa9.9□□□□□ -0.83
CTC1-201ENST00000315684 XPOTO43592 962 aaKnown RBP9.9□□□□□ -0.83
CTC1-201ENST00000315684 EIF3JO75822 258 aaKnown RBP9.9□□□□□ -0.83
CTC1-201ENST00000315684 PCP11498 1178 aaKnown RBP9.9□□□□□ -0.83
CTC1-201ENST00000315684 MCM6Q14566 821 aa9.9□□□□□ -0.83
CTC1-201ENST00000315684 KAZNQ674X7 775 aa9.9□□□□□ -0.83
CTC1-201ENST00000315684 TRIM50Q86XT4 487 aa9.9□□□□□ -0.83
CTC1-201ENST00000315684 NCOA3Q9Y6Q9 1424 aa9.9□□□□□ -0.83
CTC1-201ENST00000315684 C2CD2LO14523 706 aa9.9□□□□□ -0.83
CTC1-201ENST00000315684 GTF2A2P52657 109 aa9.9□□□□□ -0.83
CTC1-201ENST00000315684 CXCL9Q07325 125 aa9.9□□□□□ -0.83
CTC1-201ENST00000315684 BAATQ14032 418 aaPredicted RBP9.9□□□□□ -0.83
CTC1-201ENST00000315684 LDHDQ86WU2 507 aa9.9□□□□□ -0.83
CTC1-201ENST00000315684 TRIM31Q9BZY9 425 aa9.9□□□□□ -0.83
CTC1-201ENST00000315684 FAM107BQ9H098 131 aa9.9□□□□□ -0.83
CTC1-201ENST00000315684 LAMC1P11047 1609 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 FLT1P17948 1338 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 ZBTB5O15062 677 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 THAP12O43422 761 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 PGK2P07205 417 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 SKILP12757 684 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 ADAM9Q13443 819 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 PAN2Q504Q3 1202 aaKnown RBP9.89□□□□□ -0.83
CTC1-201ENST00000315684 MYSM1Q5VVJ2 828 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 TYW1BQ6NUM6 668 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 TEX2Q8IWB9 1127 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 U2AF1L4Q8WU68 220 aaKnown RBP9.89□□□□□ -0.83
CTC1-201ENST00000315684 JPH2Q9BR39 696 aaPredicted RBP9.89□□□□□ -0.83
CTC1-201ENST00000315684 WDR11Q9BZH6 1224 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 DNAI1Q9UI46 699 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 PLEKHG2Q9H7P9 1386 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 K7ERI5 159 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 STAM2O75886 525 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 MCTP2Q6DN12 878 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 CD163L1Q9NR16 1453 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 KIF28PB7ZC32 967 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 MYL5Q02045 173 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 PTPN21Q16825 1174 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 DEFB128Q7Z7B8 93 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 OR6B3Q8NGW1 331 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 PARD3BQ8TEW8 1205 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 IWS1Q96ST2 819 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 SUDS3Q9H7L9 328 aaPredicted RBP9.89□□□□□ -0.83
CTC1-201ENST00000315684 PRPHP41219 470 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 CACNB2Q08289 660 aaPredicted RBP9.89□□□□□ -0.83
CTC1-201ENST00000315684 LLGL1Q15334 1064 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 ZNF394Q53GI3 561 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 LEKR1Q6ZMV7 388 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 STAG2Q8N3U4 1231 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 USP28Q96RU2 1077 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 RASAL2Q9UJF2 1139 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 PFKFB2O60825 505 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 YWHAEP62258 255 aaKnown RBP9.89□□□□□ -0.83
CTC1-201ENST00000315684 MSTO1Q9BUK6 570 aa9.89□□□□□ -0.83
CTC1-201ENST00000315684 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.89□□□□□ -0.835e-10■■■■□ 25.2
CTC1-201ENST00000315684 TYW5A2RUC4 315 aaKnown RBP9.88□□□□□ -0.83
CTC1-201ENST00000315684 PFKFB1P16118 471 aa9.88□□□□□ -0.83
CTC1-201ENST00000315684 NSUN4Q96CB9 384 aaKnown RBP9.88□□□□□ -0.83
CTC1-201ENST00000315684 ITSN1Q15811 1721 aa9.88□□□□□ -0.83
CTC1-201ENST00000315684 CRCPO75575 148 aa9.88□□□□□ -0.83
CTC1-201ENST00000315684 QRICH1Q2TAL8 776 aa9.88□□□□□ -0.83
CTC1-201ENST00000315684 ZSWIM6Q9HCJ5 1215 aa9.88□□□□□ -0.83
CTC1-201ENST00000315684 HERC5Q9UII4 1024 aaKnown RBP9.88□□□□□ -0.83
CTC1-201ENST00000315684 LRRN2O75325 713 aa9.88□□□□□ -0.83
CTC1-201ENST00000315684 STK10O94804 968 aaKnown RBP9.88□□□□□ -0.83
CTC1-201ENST00000315684 KLHL30Q0D2K2 578 aa9.88□□□□□ -0.83
CTC1-201ENST00000315684 CCDC122Q5T0U0 273 aa9.88□□□□□ -0.83
CTC1-201ENST00000315684 HEXIM2Q96MH2 286 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms