RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 TMEM39AQ9NV64 488 aa16.88■□□□□ 0.29
PPP1CA-201ENST00000312989 PRKAG2Q9UGJ0 569 aa16.88■□□□□ 0.29
PPP1CA-201ENST00000312989 MROH7Q68CQ1 1323 aa16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 BAZ2BQ9UIF8 2168 aaKnown RBP16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 DCDC2CA8MYV0 355 aa16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 B4DLN1 442 aa16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 B4GALT4O60513 344 aa16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 MMP3P08254 477 aa16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 CPT1AP50416 773 aa16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 MRPL12P52815 198 aaKnown RBP16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 RCAN1P53805 252 aa16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 SP2Q02086 613 aa16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 TRAF1Q13077 416 aa16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 SHHQ15465 462 aa16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 USP17L6PQ6QN14 398 aa16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 AFG1LQ8WV93 481 aa16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 KAT2BQ92831 832 aa16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 JAKMIP1Q96N16 626 aaKnown RBP16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 LBHD1Q9BQE6 289 aaPredicted RBP16.87■□□□□ 0.29
PPP1CA-201ENST00000312989 UMODL1Q5DID0 1318 aa16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 KLF18A0A0U1RQI7 1052 aa16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 TIMP1P01033 207 aa16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 HMGB1P09429 215 aaKnown RBP16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 HOXD8P13378 290 aaPredicted RBP16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 RPS6KB1P23443 525 aa16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 C16orf59Q7L2K0 433 aa16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 FCHSD1Q86WN1 690 aa16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 CCDC82Q8N4S0 544 aa16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 PPP1R13LQ8WUF5 828 aa16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 INPP4AQ96PE3 977 aaPredicted RBP16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 CTAGE1Q96RT6 745 aa16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 MTG1Q9BT17 334 aaPredicted RBP16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 USP26Q9BXU7 913 aa16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 TRPV6Q9H1D0 765 aa16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 ALDH8A1Q9H2A2 487 aaPredicted RBP16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 BCAS3Q9H6U6 928 aa16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 POLR3EQ9NVU0 708 aa16.86■□□□□ 0.29
PPP1CA-201ENST00000312989 SCN10AQ9Y5Y9 1956 aa16.85■□□□□ 0.29
PPP1CA-201ENST00000312989 ZBTB43O43298 467 aa16.85■□□□□ 0.29
PPP1CA-201ENST00000312989 ZEB2O60315 1214 aa16.85■□□□□ 0.29
PPP1CA-201ENST00000312989 REC8O95072 547 aa16.85■□□□□ 0.29
PPP1CA-201ENST00000312989 GH1P01241 217 aa16.85■□□□□ 0.29
PPP1CA-201ENST00000312989 EVCP57679 992 aa16.85■□□□□ 0.29
PPP1CA-201ENST00000312989 RTN1Q16799 776 aa16.85■□□□□ 0.29
PPP1CA-201ENST00000312989 WWC2Q6AWC2 1192 aa16.85■□□□□ 0.29
PPP1CA-201ENST00000312989 Q6ZUG5 572 aa16.85■□□□□ 0.29
PPP1CA-201ENST00000312989 MYH6P13533 1939 aa16.85■□□□□ 0.29
PPP1CA-201ENST00000312989 MYL3P08590 195 aa16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 MYCLP12524 364 aaPredicted RBP16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 RAG1P15918 1043 aa16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 UBA1P22314 1058 aaKnown RBP16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 ICAM3P32942 547 aa16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 APOBRQ0VD83 1088 aa16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 MYSM1Q5VVJ2 828 aa16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 MFSD5Q6N075 450 aa16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 BRF1Q92994 677 aa16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 VTI1AQ96AJ9 217 aa16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 NOC4LQ9BVI4 516 aaKnown RBP16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 SEZ6LQ9BYH1 1024 aa16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 WNT8AQ9H1J5 351 aa16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 TRMT13Q9NUP7 481 aaKnown RBP16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 RBM28Q9NW13 759 aaKnown RBP16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 SEC63Q9UGP8 760 aaKnown RBP16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 TELO2Q9Y4R8 837 aa16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 MRVI1Q9Y6F6 885 aa16.84■□□□□ 0.29
PPP1CA-201ENST00000312989 GOLGA8AA7E2F4 631 aa16.83■□□□□ 0.28
PPP1CA-201ENST00000312989 GOLGA8BA8MQT2 603 aa16.83■□□□□ 0.28
PPP1CA-201ENST00000312989 CCND2P30279 289 aa16.83■□□□□ 0.28
PPP1CA-201ENST00000312989 ADD1P35611 737 aaKnown RBP16.83■□□□□ 0.28
PPP1CA-201ENST00000312989 TOB2Q14106 344 aaPredicted RBP16.83■□□□□ 0.28
PPP1CA-201ENST00000312989 UBE2SQ16763 222 aa16.83■□□□□ 0.28
PPP1CA-201ENST00000312989 NBPF20Q3BBV1 942 aa16.83■□□□□ 0.28
PPP1CA-201ENST00000312989 HSDL1Q3SXM5 330 aa16.83■□□□□ 0.28
PPP1CA-201ENST00000312989 ZSWIM6Q9HCJ5 1215 aa16.83■□□□□ 0.28
PPP1CA-201ENST00000312989 CDH23Q9H251 3354 aa16.83■□□□□ 0.28
PPP1CA-201ENST00000312989 HAS3O00219 553 aa16.82■□□□□ 0.28
PPP1CA-201ENST00000312989 ADAMTS3O15072 1205 aa16.82■□□□□ 0.28
PPP1CA-201ENST00000312989 CYP2C18P33260 490 aa16.82■□□□□ 0.28
PPP1CA-201ENST00000312989 FPGSQ05932 587 aa16.82■□□□□ 0.28
PPP1CA-201ENST00000312989 NTRK3Q16288 839 aa16.82■□□□□ 0.28
PPP1CA-201ENST00000312989 CELF3Q5SZQ8 465 aaKnown RBP16.82■□□□□ 0.28
PPP1CA-201ENST00000312989 RASIP1Q5U651 963 aa16.82■□□□□ 0.28
PPP1CA-201ENST00000312989 PCNX4Q63HM2 1172 aa16.82■□□□□ 0.28
PPP1CA-201ENST00000312989 GPR153Q6NV75 609 aa16.82■□□□□ 0.28
PPP1CA-201ENST00000312989 BLOC1S2Q6QNY1 142 aa16.82■□□□□ 0.28
PPP1CA-201ENST00000312989 PPTC7Q8NI37 304 aa16.82■□□□□ 0.28
PPP1CA-201ENST00000312989 PPP1R12CQ9BZL4 782 aa16.82■□□□□ 0.28
PPP1CA-201ENST00000312989 KIAA1217Q5T5P2 1943 aa16.82■□□□□ 0.28
PPP1CA-201ENST00000312989 COL6A3P12111 3177 aa16.81■□□□□ 0.28
PPP1CA-201ENST00000312989 SPATA31C2B4DYI2 1134 aa16.81■□□□□ 0.28
PPP1CA-201ENST00000312989 STXBP3O00186 592 aa16.81■□□□□ 0.28
PPP1CA-201ENST00000312989 KPNA6O60684 536 aa16.81■□□□□ 0.28
PPP1CA-201ENST00000312989 GGPS1O95749 300 aa16.81■□□□□ 0.28
PPP1CA-201ENST00000312989 F2P00734 622 aa16.81■□□□□ 0.28
PPP1CA-201ENST00000312989 CSF2RAP15509 400 aa16.81■□□□□ 0.28
PPP1CA-201ENST00000312989 CASTP20810 708 aaKnown RBP16.81■□□□□ 0.28
PPP1CA-201ENST00000312989 NFRKBQ6P4R8 1299 aa16.81■□□□□ 0.28
PPP1CA-201ENST00000312989 SESTD1Q86VW0 696 aa16.81■□□□□ 0.28
PPP1CA-201ENST00000312989 PSTPIP2Q9H939 334 aa16.81■□□□□ 0.28
PPP1CA-201ENST00000312989 TLR3O15455 904 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms