RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 NPHP3-ACAD11A0A0J9YXS1 232 aa28.15■■■□□ 2.1
HOXB3-201ENST00000311626 MPHOSPH10O00566 681 aaKnown RBP28.15■■■□□ 2.1
HOXB3-201ENST00000311626 MARCH6O60337 910 aa28.15■■■□□ 2.1
HOXB3-201ENST00000311626 EIF3JO75822 258 aaKnown RBP28.15■■■□□ 2.1
HOXB3-201ENST00000311626 C15orf52Q6ZUT6 534 aaKnown RBP28.15■■■□□ 2.1
HOXB3-201ENST00000311626 COG1Q8WTW3 980 aa28.15■■■□□ 2.1
HOXB3-201ENST00000311626 KIF11P52732 1056 aa28.15■■■□□ 2.1
HOXB3-201ENST00000311626 SHROOM1Q2M3G4 852 aaPredicted RBP28.15■■■□□ 2.1
HOXB3-201ENST00000311626 KRT79Q5XKE5 535 aa28.15■■■□□ 2.1
HOXB3-201ENST00000311626 WDR93Q6P2C0 686 aa28.15■■■□□ 2.1
HOXB3-201ENST00000311626 NLRC4Q9NPP4 1024 aa28.15■■■□□ 2.1
HOXB3-201ENST00000311626 USP17L10C9JJH3 530 aa28.14■■■□□ 2.1
HOXB3-201ENST00000311626 NCK2O43639 380 aa28.14■■■□□ 2.1
HOXB3-201ENST00000311626 FXR2P51116 673 aaKnown RBP eCLIP28.14■■■□□ 2.1
HOXB3-201ENST00000311626 GBP3Q9H0R5 595 aa28.14■■■□□ 2.1
HOXB3-201ENST00000311626 NT5C2P49902 561 aa28.14■■■□□ 2.09
HOXB3-201ENST00000311626 NELFCDQ8IXH7 590 aa28.14■■■□□ 2.09
HOXB3-201ENST00000311626 SALL4Q9UJQ4 1053 aa28.14■■■□□ 2.09
HOXB3-201ENST00000311626 AKR1B10O60218 316 aa28.13■■■□□ 2.09
HOXB3-201ENST00000311626 TUBB4BP68371 445 aa28.13■■■□□ 2.09
HOXB3-201ENST00000311626 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.13■■■□□ 2.09
HOXB3-201ENST00000311626 TMC4Q7Z404 712 aa28.13■■■□□ 2.09
HOXB3-201ENST00000311626 HAS1Q92839 578 aa28.13■■■□□ 2.09
HOXB3-201ENST00000311626 EXOC4Q96A65 974 aa28.13■■■□□ 2.09
HOXB3-201ENST00000311626 RBM17Q96I25 401 aaKnown RBP28.13■■■□□ 2.09
HOXB3-201ENST00000311626 USP21Q9UK80 565 aa28.13■■■□□ 2.09
HOXB3-201ENST00000311626 PLAGL2Q9UPG8 496 aa28.13■■■□□ 2.09
HOXB3-201ENST00000311626 ESYT2A0FGR8 921 aa28.13■■■□□ 2.09
HOXB3-201ENST00000311626 GYS1P13807 737 aa28.13■■■□□ 2.09
HOXB3-201ENST00000311626 ZSCAN26Q16670 478 aa28.13■■■□□ 2.09
HOXB3-201ENST00000311626 HDAC7Q8WUI4 952 aa28.13■■■□□ 2.09
HOXB3-201ENST00000311626 CRACR2AQ9BSW2 395 aa28.13■■■□□ 2.09
HOXB3-201ENST00000311626 DDX25Q9UHL0 483 aaKnown RBP28.13■■■□□ 2.09
HOXB3-201ENST00000311626 GAKO14976 1311 aa28.13■■■□□ 2.09
HOXB3-201ENST00000311626 FAM196BA6NMK8 535 aa28.12■■■□□ 2.09
HOXB3-201ENST00000311626 GFPT1Q06210 699 aaPredicted RBP28.12■■■□□ 2.09
HOXB3-201ENST00000311626 MAN2A1Q16706 1144 aa28.12■■■□□ 2.09
HOXB3-201ENST00000311626 NFRKBQ6P4R8 1299 aa28.12■■■□□ 2.09
HOXB3-201ENST00000311626 LRRC55Q6ZSA7 311 aa28.12■■■□□ 2.09
HOXB3-201ENST00000311626 EHBP1Q8NDI1 1231 aa28.12■■■□□ 2.09
HOXB3-201ENST00000311626 PURBQ96QR8 312 aaKnown RBP28.12■■■□□ 2.09
HOXB3-201ENST00000311626 STK17AQ9UEE5 414 aa28.12■■■□□ 2.09
HOXB3-201ENST00000311626 A0A1W2PQJ5 194 aa28.12■■■□□ 2.09
HOXB3-201ENST00000311626 ENOX2Q16206 610 aaKnown RBP28.12■■■□□ 2.09
HOXB3-201ENST00000311626 DOK7Q18PE1 504 aa28.12■■■□□ 2.09
HOXB3-201ENST00000311626 CERS5Q8N5B7 392 aa28.12■■■□□ 2.09
HOXB3-201ENST00000311626 E9PMD0 336 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 MYH10P35580 1976 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 PVALEFA0A1B0GWK0 134 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 USP17L15C9J2P7 530 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 USP17L13C9JLJ4 530 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 USP17L11C9JVI0 530 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 USP17L18D6R9N7 530 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 USP17L22D6RA61 530 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 USP17L17D6RBQ6 530 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 USP17L19D6RCP7 530 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 USP17L20D6RJB6 530 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 SMARCA1P28370 1054 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 NOVP48745 357 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 DNA2P51530 1060 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 USP17L24Q0WX57 530 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 SEMA3FQ13275 785 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 CRY2Q49AN0 593 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 HSP90B2PQ58FF3 399 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 USP17L6PQ6QN14 398 aa28.11■■■□□ 2.09
HOXB3-201ENST00000311626 GUF1Q8N442 669 aaKnown RBP28.11■■■□□ 2.09
HOXB3-201ENST00000311626 FAM163AQ96GL9 167 aaPredicted RBP28.11■■■□□ 2.09
HOXB3-201ENST00000311626 BUB1O43683 1085 aa28.1■■■□□ 2.09
HOXB3-201ENST00000311626 GABPAQ06546 454 aa28.1■■■□□ 2.09
HOXB3-201ENST00000311626 ZNF543Q08ER8 600 aa28.1■■■□□ 2.09
HOXB3-201ENST00000311626 COASYQ13057 564 aa28.1■■■□□ 2.09
HOXB3-201ENST00000311626 ASPRV1Q53RT3 343 aa28.1■■■□□ 2.09
HOXB3-201ENST00000311626 TRAF5O00463 557 aa28.1■■■□□ 2.09
HOXB3-201ENST00000311626 CAPN2P17655 700 aa28.1■■■□□ 2.09
HOXB3-201ENST00000311626 SLC7A5Q01650 507 aa28.1■■■□□ 2.09
HOXB3-201ENST00000311626 FIGNQ5HY92 759 aa28.1■■■□□ 2.09
HOXB3-201ENST00000311626 ZNF662Q6ZS27 426 aa28.1■■■□□ 2.09
HOXB3-201ENST00000311626 SH2D4AQ9H788 454 aa28.1■■■□□ 2.09
HOXB3-201ENST00000311626 USP40Q9NVE5 1235 aa28.1■■■□□ 2.09
HOXB3-201ENST00000311626 SNAP25P60880 206 aa28.09■■■□□ 2.09
HOXB3-201ENST00000311626 RASSF7Q02833 373 aa28.09■■■□□ 2.09
HOXB3-201ENST00000311626 KCNMA1Q12791 1236 aa28.09■■■□□ 2.09
HOXB3-201ENST00000311626 CKAP4Q07065 602 aaKnown RBP28.09■■■□□ 2.09
HOXB3-201ENST00000311626 CACNA2D4Q7Z3S7 1137 aa28.09■■■□□ 2.09
HOXB3-201ENST00000311626 CREG2Q8IUH2 290 aa28.09■■■□□ 2.09
HOXB3-201ENST00000311626 SLF2Q8IX21 1173 aa28.09■■■□□ 2.09
HOXB3-201ENST00000311626 BAP1Q92560 729 aa28.09■■■□□ 2.09
HOXB3-201ENST00000311626 DNAJC19Q96DA6 116 aa28.09■■■□□ 2.09
HOXB3-201ENST00000311626 PLEKHA4Q9H4M7 779 aa28.09■■■□□ 2.09
HOXB3-201ENST00000311626 PNMA6FA0A0J9YX94 578 aa28.08■■■□□ 2.09
HOXB3-201ENST00000311626 STAT3P40763 770 aa28.08■■■□□ 2.09
HOXB3-201ENST00000311626 PPP1R2P41236 205 aa28.08■■■□□ 2.09
HOXB3-201ENST00000311626 CACNB3P54284 484 aa28.08■■■□□ 2.09
HOXB3-201ENST00000311626 TMEM119Q4V9L6 283 aa28.08■■■□□ 2.09
HOXB3-201ENST00000311626 FOXR1Q6PIV2 292 aa28.08■■■□□ 2.09
HOXB3-201ENST00000311626 ZFPM1Q8IX07 1006 aa28.08■■■□□ 2.09
HOXB3-201ENST00000311626 ZHX3Q9H4I2 956 aa28.08■■■□□ 2.09
HOXB3-201ENST00000311626 RIC8AQ9NPQ8 531 aa28.08■■■□□ 2.09
HOXB3-201ENST00000311626 PANK4Q9NVE7 773 aa28.08■■■□□ 2.09
HOXB3-201ENST00000311626 SNX12Q9UMY4 172 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms