RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 ZSCAN22P10073 491 aaPredicted RBP11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 CCND3P30281 292 aaPredicted RBP11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 HOXA13P31271 388 aaPredicted RBP11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 SSRP1Q08945 709 aaKnown RBP11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 FUT2Q10981 343 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 MAP3K21Q5TCX8 1036 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 MAMDC4Q6UXC1 1216 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 ARMCX2Q7L311 632 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 DNERQ8NFT8 737 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 GPKOWQ92917 476 aaPredicted RBP eCLIP11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 RMDN3Q96TC7 470 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 PSTPIP2Q9H939 334 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 MAP3K20Q9NYL2 800 aaKnown RBP11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 KCNG1Q9UIX4 513 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 DNAH12Q6ZR08 3092 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 SYNGAP1Q96PV0 1343 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 NID2Q14112 1375 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 CDKL5O76039 1030 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 TFRCP02786 760 aaKnown RBP11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 GJB1P08034 283 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 IFNAR1P17181 557 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 NAPAP54920 295 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 ARHGEF16Q5VV41 709 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 FCHSD1Q86WN1 690 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 SAMD3Q8N6K7 520 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 SMARCC2Q8TAQ2 1214 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 SYTL5Q8TDW5 730 aaPredicted RBP11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 NSUN6Q8TEA1 469 aaKnown RBP11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 ZSCAN31Q96LW9 406 aaPredicted RBP11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 ABHD16BQ9H3Z7 469 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 LIMCH1Q9UPQ0 1083 aa11.18□□□□□ -0.62
CHRNA9-201ENST00000310169 ELP1O95163 1332 aa11.17□□□□□ -0.62
CHRNA9-201ENST00000310169 RBBP6Q7Z6E9 1792 aaKnown RBP11.17□□□□□ -0.62
CHRNA9-201ENST00000310169 OPLAHO14841 1288 aa11.17□□□□□ -0.62
CHRNA9-201ENST00000310169 PRPF3O43395 683 aaKnown RBP11.17□□□□□ -0.62
CHRNA9-201ENST00000310169 PFKFB2O60825 505 aa11.17□□□□□ -0.62
CHRNA9-201ENST00000310169 SCG2P13521 617 aa11.17□□□□□ -0.62
CHRNA9-201ENST00000310169 ALDH5A1P51649 535 aaPredicted RBP11.17□□□□□ -0.62
CHRNA9-201ENST00000310169 PDE4DQ08499 809 aa11.17□□□□□ -0.62
CHRNA9-201ENST00000310169 SCRN1Q12765 414 aa11.17□□□□□ -0.62
CHRNA9-201ENST00000310169 NTRK3Q16288 839 aa11.17□□□□□ -0.62
CHRNA9-201ENST00000310169 EEPD1Q7L9B9 569 aa11.17□□□□□ -0.62
CHRNA9-201ENST00000310169 FGD4Q96M96 766 aa11.17□□□□□ -0.62
CHRNA9-201ENST00000310169 TAAR1Q96RJ0 339 aa11.17□□□□□ -0.62
CHRNA9-201ENST00000310169 RNF26Q9BY78 433 aaPredicted RBP11.17□□□□□ -0.62
CHRNA9-201ENST00000310169 OGFRQ9NZT2 677 aa11.17□□□□□ -0.62
CHRNA9-201ENST00000310169 POTEFA5A3E0 1075 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 hCG_1984214I3L0E3 225 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 MSCO60682 206 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 SNAI1O95863 264 aaPredicted RBP11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 CYBAP13498 195 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 HSD17B4P51659 736 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 ACVR2BQ13705 512 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 ME3Q16798 604 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 PFKFB3Q16875 520 aaPredicted RBP11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 WWC2Q6AWC2 1192 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 ZNF713Q8N859 430 aaPredicted RBP11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 NECAB1Q8N987 351 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 U2AF1L4Q8WU68 220 aaKnown RBP11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 PAK6Q9NQU5 681 aaPredicted RBP11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 SH2B1Q9NRF2 756 aaPredicted RBP11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 BARHL2Q9NY43 387 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 NRBP1Q9UHY1 535 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 SEPT4O43236 478 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 SGPL1O95470 568 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 IGHA2P01877 340 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 EIF2AK2P19525 551 aaKnown RBP11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 EN2P19622 333 aaPredicted RBP11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 GJA8P48165 433 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 USP17L6PQ6QN14 398 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 TRPV1Q8NER1 839 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 CCDC12Q8WUD4 166 aaPredicted RBP11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 COL20A1Q9P218 1284 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 PAXBP1Q9Y5B6 917 aa11.16□□□□□ -0.62
CHRNA9-201ENST00000310169 LCTP09848 1927 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 LOC102724159A0A0B4J2E5 919 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 SMCO2A6NFE2 343 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 MYCNP04198 464 aaPredicted RBP11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 CCDC192P0DO97 292 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 PWP2Q15269 919 aaKnown RBP11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 ANO1Q5XXA6 986 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 CNPY4Q8N129 248 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 IWS1Q96ST2 819 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 CGNQ9P2M7 1197 aaKnown RBP11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 DDX20Q9UHI6 824 aaKnown RBP11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 FAM184BQ9ULE4 1060 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 ASTN1O14525 1302 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 SMTNL1A8MU46 457 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 STXBP3O00186 592 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 NEMFO60524 1076 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 DEXIO95424 95 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 AKR1A1P14550 325 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 CDC25BP30305 580 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 ADCY7P51828 1080 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 DHX8Q14562 1220 aaKnown RBP11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 CCDC144BQ3MJ40 725 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 PPP1R18Q6NYC8 613 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 RNF214Q8ND24 703 aa11.15□□□□□ -0.62
CHRNA9-201ENST00000310169 GTF3C6Q969F1 213 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms