RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 CCDC63Q8NA47 563 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 TEKT1Q969V4 418 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 CALR3Q96L12 384 aaKnown RBP10.18□□□□□ -0.78
XCR1-201ENST00000309285 RIOK1Q9BRS2 568 aaKnown RBP10.18□□□□□ -0.78
XCR1-201ENST00000309285 IQCGQ9H095 443 aaKnown RBP10.18□□□□□ -0.78
XCR1-201ENST00000309285 MAN1B1Q9UKM7 699 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 AFDNP55196 1824 aaKnown RBP10.18□□□□□ -0.78
XCR1-201ENST00000309285 TXNDC9O14530 226 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 FOXP2O15409 715 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 ALDH1B1P30837 517 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 ALDH3A1P30838 453 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 PRPF38AQ8NAV1 312 aaKnown RBP10.18□□□□□ -0.78
XCR1-201ENST00000309285 TSC22D3Q99576 134 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 SMIM22K7EJ46 135 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 TRAF5O00463 557 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 PPEF1O14829 653 aaPredicted RBP10.18□□□□□ -0.78
XCR1-201ENST00000309285 CDC25BP30305 580 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 MRPS9P82933 396 aaKnown RBP10.18□□□□□ -0.78
XCR1-201ENST00000309285 NTRK3Q16288 839 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 KRT71Q3SY84 523 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 PRR5LQ6MZQ0 368 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 SRGAP1Q7Z6B7 1085 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 MORC4Q8TE76 937 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 EEF2KMTQ96G04 330 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 FAM170AA1A519 330 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 CCDC169A6NNP5 214 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 MYCLP12524 364 aaPredicted RBP10.18□□□□□ -0.78
XCR1-201ENST00000309285 ZNF131P52739 623 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 GPSM2P81274 684 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 GOLGA8FQ08AF8 430 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 GOLGA8DPQ0D2H9 430 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 PAK1Q13153 545 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 PSMD2Q13200 908 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 MIER3Q7Z3K6 550 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 DHX40Q8IX18 779 aaKnown RBP10.18□□□□□ -0.78
XCR1-201ENST00000309285 SRBD1Q8N5C6 995 aaKnown RBP10.18□□□□□ -0.78
XCR1-201ENST00000309285 TRIML1Q8N9V2 468 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 TRIM31Q9BZY9 425 aa10.18□□□□□ -0.78
XCR1-201ENST00000309285 DDX39AO00148 427 aaKnown RBP10.17□□□□□ -0.78
XCR1-201ENST00000309285 CDK8P49336 464 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 COG7P83436 770 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 SLC10A5Q5PT55 438 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 USP49Q70CQ1 688 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 APBB1IPQ7Z5R6 666 aaPredicted RBP10.17□□□□□ -0.78
XCR1-201ENST00000309285 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.17□□□□□ -0.78
XCR1-201ENST00000309285 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.17□□□□□ -0.78
XCR1-201ENST00000309285 PICK1Q9NRD5 415 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.17□□□□□ -0.78
XCR1-201ENST00000309285 SAR1BQ9Y6B6 198 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 H0YIN7 160 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 SLC1A4P43007 532 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 HIBCHQ6NVY1 386 aaPredicted RBP10.17□□□□□ -0.78
XCR1-201ENST00000309285 CYP26C1Q6V0L0 522 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 JAKMIP2Q96AA8 810 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 SH3GL3Q99963 347 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 EPC1Q9H2F5 836 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 KCNF1Q9H3M0 494 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 MROH7-TTC4A0A0A0MT08 1334 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 SCN11AQ9UI33 1791 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 ORC4O43929 436 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 ADRA2BP18089 450 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 TRAPPC10P48553 1259 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 PDE4DQ08499 809 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 PAK2Q13177 524 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 GNPTABQ3T906 1256 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 PRR16Q569H4 304 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 MCUR1Q96AQ8 359 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 CCDC77Q9BR77 488 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 TAB2Q9NYJ8 693 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 ATP6V0A2Q9Y487 856 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 KRT9P35527 623 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 CASP8Q14790 479 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 TMEM47Q9BQJ4 181 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 DBNDD1Q9H9R9 158 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 SAMSN1Q9NSI8 373 aaKnown RBP10.17□□□□□ -0.78
XCR1-201ENST00000309285 RASAL2Q9UJF2 1139 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 PCDHA4Q9UN74 947 aa10.17□□□□□ -0.78
XCR1-201ENST00000309285 ADCY7P51828 1080 aa10.16□□□□□ -0.78
XCR1-201ENST00000309285 GRIN1Q05586 938 aa10.16□□□□□ -0.78
XCR1-201ENST00000309285 C12orf60Q5U649 245 aa10.16□□□□□ -0.78
XCR1-201ENST00000309285 KLHL7Q8IXQ5 586 aa10.16□□□□□ -0.78
XCR1-201ENST00000309285 NKIRAS1Q9NYS0 192 aa10.16□□□□□ -0.78
XCR1-201ENST00000309285 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.16□□□□□ -0.78
XCR1-201ENST00000309285 LRWD1Q9UFC0 647 aa10.16□□□□□ -0.78
XCR1-201ENST00000309285 IVNS1ABPQ9Y6Y0 642 aa10.16□□□□□ -0.78
XCR1-201ENST00000309285 EIF4E1BA6NMX2 242 aaKnown RBP10.16□□□□□ -0.78
XCR1-201ENST00000309285 ENO4A6NNW6 628 aa10.16□□□□□ -0.78
XCR1-201ENST00000309285 TROAPQ12815 778 aa10.16□□□□□ -0.78
XCR1-201ENST00000309285 MAP7D1Q3KQU3 841 aa10.16□□□□□ -0.78
XCR1-201ENST00000309285 RBM43Q6ZSC3 357 aaKnown RBP10.16□□□□□ -0.78
XCR1-201ENST00000309285 CABP7Q86V35 215 aa10.16□□□□□ -0.78
XCR1-201ENST00000309285 METTL16Q86W50 562 aaKnown RBP10.16□□□□□ -0.78
XCR1-201ENST00000309285 STAG2Q8N3U4 1231 aa10.16□□□□□ -0.78
XCR1-201ENST00000309285 ANKRD7Q92527 254 aa10.16□□□□□ -0.78
XCR1-201ENST00000309285 LRRC45Q96CN5 670 aa10.16□□□□□ -0.78
XCR1-201ENST00000309285 GSDMAQ96QA5 445 aa10.16□□□□□ -0.78
XCR1-201ENST00000309285 FAM217BQ9NTX9 383 aaPredicted RBP10.16□□□□□ -0.78
XCR1-201ENST00000309285 TECP42680 631 aa10.16□□□□□ -0.78
XCR1-201ENST00000309285 PFKFB3Q16875 520 aaPredicted RBP10.16□□□□□ -0.78
XCR1-201ENST00000309285 CC2D1AQ6P1N0 951 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms