RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ID3Q02535 119 aa6.05□□□□□ -1.44
CKS1B-201ENST00000308987 TTLL4Q14679 1199 aa6.05□□□□□ -1.44
CKS1B-201ENST00000308987 TMEM67Q5HYA8 995 aa6.05□□□□□ -1.44
CKS1B-201ENST00000308987 FBXO15Q8NCQ5 510 aaPredicted RBP6.05□□□□□ -1.44
CKS1B-201ENST00000308987 RPGRQ92834 1020 aaKnown RBP6.05□□□□□ -1.44
CKS1B-201ENST00000308987 ZNF428Q96B54 188 aa6.05□□□□□ -1.44
CKS1B-201ENST00000308987 RBM17Q96I25 401 aaKnown RBP6.05□□□□□ -1.44
CKS1B-201ENST00000308987 KIRREL1Q96J84 757 aa6.05□□□□□ -1.44
CKS1B-201ENST00000308987 C20orf173Q96LM9 149 aa6.05□□□□□ -1.44
CKS1B-201ENST00000308987 MCOLN1Q9GZU1 580 aa6.05□□□□□ -1.44
CKS1B-201ENST00000308987 CCDC86Q9H6F5 360 aaKnown RBP6.05□□□□□ -1.44
CKS1B-201ENST00000308987 MYH16Q9H6N6 1097 aa6.05□□□□□ -1.44
CKS1B-201ENST00000308987 KCNQ5Q9NR82 932 aa6.05□□□□□ -1.44
CKS1B-201ENST00000308987 ADARB2Q9NS39 739 aaKnown RBP6.05□□□□□ -1.44
CKS1B-201ENST00000308987 PCOLCE2Q9UKZ9 415 aa6.05□□□□□ -1.44
CKS1B-201ENST00000308987 ATP6V0A2Q9Y487 856 aa6.05□□□□□ -1.44
CKS1B-201ENST00000308987 RANBP2P49792 3224 aaKnown RBP6.05□□□□□ -1.44
CKS1B-201ENST00000308987 IL16Q14005 1332 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 FAM155AB1AL88 458 aaPredicted RBP6.04□□□□□ -1.44
CKS1B-201ENST00000308987 BCAR3O75815 825 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 RAD17O75943 681 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 TMEM253P0C7T8 217 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 HOXA5P20719 270 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 MAP2K2P36507 400 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 KIAA2012Q0VF49 1180 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 AP3B2Q13367 1082 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 ZNF211Q13398 564 aaPredicted RBP6.04□□□□□ -1.44
CKS1B-201ENST00000308987 NFE2L2Q16236 605 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 KRT24Q2M2I5 525 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 CIAPIN1Q6FI81 312 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 CYFIP1Q7L576 1253 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 FAM214BQ7L5A3 538 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 NIM1KQ8IY84 436 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 CCDC146Q8IYE0 955 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 TOP6BLQ8N6T0 577 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 DIRC2Q96SL1 478 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 ZC3H12CQ9C0D7 883 aaKnown RBP6.04□□□□□ -1.44
CKS1B-201ENST00000308987 RWDD1Q9H446 243 aaPredicted RBP6.04□□□□□ -1.44
CKS1B-201ENST00000308987 ZNF576Q9H609 170 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 UPF2Q9HAU5 1272 aaKnown RBP6.04□□□□□ -1.44
CKS1B-201ENST00000308987 KCNK12Q9HB15 430 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 ZNRF3Q9ULT6 936 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 A0A0C4DFX4 3053 aa6.04□□□□□ -1.44
CKS1B-201ENST00000308987 MYH3P11055 1940 aa6.03□□□□□ -1.44
CKS1B-201ENST00000308987 ASTN2O75129 1339 aaPredicted RBP6.03□□□□□ -1.44
CKS1B-201ENST00000308987 ZNF862O60290 1169 aa6.03□□□□□ -1.44
CKS1B-201ENST00000308987 IGHDP01880 384 aa6.03□□□□□ -1.44
CKS1B-201ENST00000308987 ECE1P42892 770 aa6.03□□□□□ -1.44
CKS1B-201ENST00000308987 KCNA10Q16322 511 aa6.03□□□□□ -1.44
CKS1B-201ENST00000308987 KIF6Q6ZMV9 814 aa6.03□□□□□ -1.44
CKS1B-201ENST00000308987 USP48Q86UV5 1035 aa6.03□□□□□ -1.44
CKS1B-201ENST00000308987 NLRP10Q86W26 655 aa6.03□□□□□ -1.44
CKS1B-201ENST00000308987 GALNT12Q8IXK2 581 aa6.03□□□□□ -1.44
CKS1B-201ENST00000308987 SP8Q8IXZ3 490 aa6.03□□□□□ -1.44
CKS1B-201ENST00000308987 EHD4Q9H223 541 aa6.03□□□□□ -1.44
CKS1B-201ENST00000308987 RTL9Q8NET4 1388 aa6.03□□□□□ -1.44
CKS1B-201ENST00000308987 PSMD14O00487 310 aa6.02□□□□□ -1.45
CKS1B-201ENST00000308987 EIF2S2P20042 333 aaKnown RBP6.02□□□□□ -1.45
CKS1B-201ENST00000308987 RGS3P49796 1198 aa6.02□□□□□ -1.45
CKS1B-201ENST00000308987 PARP10Q53GL7 1025 aa6.02□□□□□ -1.45
CKS1B-201ENST00000308987 COPS6Q7L5N1 327 aa6.02□□□□□ -1.45
CKS1B-201ENST00000308987 PPP1R42Q7Z4L9 355 aa6.02□□□□□ -1.45
CKS1B-201ENST00000308987 SPACA3Q8IXA5 215 aa6.02□□□□□ -1.45
CKS1B-201ENST00000308987 RELTQ969Z4 430 aa6.02□□□□□ -1.45
CKS1B-201ENST00000308987 HHIPL1Q96JK4 782 aa6.02□□□□□ -1.45
CKS1B-201ENST00000308987 UTP14AQ9BVJ6 771 aaKnown RBP6.02□□□□□ -1.45
CKS1B-201ENST00000308987 VPS33BQ9H267 617 aa6.02□□□□□ -1.45
CKS1B-201ENST00000308987 PNNQ9H307 717 aaKnown RBP6.02□□□□□ -1.45
CKS1B-201ENST00000308987 NSUN3Q9H649 340 aaKnown RBP6.02□□□□□ -1.45
CKS1B-201ENST00000308987 CD320Q9NPF0 282 aa6.02□□□□□ -1.45
CKS1B-201ENST00000308987 CNOT7Q9UIV1 285 aaKnown RBP6.02□□□□□ -1.45
CKS1B-201ENST00000308987 PCDHGC5Q9Y5F6 944 aa6.02□□□□□ -1.45
CKS1B-201ENST00000308987 CDHR2Q9BYE9 1310 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 ADM5C9JUS6 153 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 FZD6O60353 706 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 BBOX1O75936 387 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 ITPKAP23677 461 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 ZNF157P51786 506 aaPredicted RBP6.01□□□□□ -1.45
CKS1B-201ENST00000308987 HUNKP57058 714 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 TCIRG1Q13488 830 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 HDAC1Q13547 482 aaPredicted RBP6.01□□□□□ -1.45
CKS1B-201ENST00000308987 GRAPQ13588 217 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 KIF4BQ2VIQ3 1234 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 TBC1D10BQ4KMP7 808 aaPredicted RBP6.01□□□□□ -1.45
CKS1B-201ENST00000308987 L1TD1Q5T7N2 865 aaKnown RBP6.01□□□□□ -1.45
CKS1B-201ENST00000308987 ZKSCAN2Q63HK3 967 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 DPP8Q6V1X1 898 aaPredicted RBP6.01□□□□□ -1.45
CKS1B-201ENST00000308987 ATG14Q6ZNE5 492 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 GRAPLQ8TC17 118 aaPredicted RBP6.01□□□□□ -1.45
CKS1B-201ENST00000308987 XAGE3Q8WTP9 111 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 FRAT1Q92837 279 aaPredicted RBP6.01□□□□□ -1.45
CKS1B-201ENST00000308987 CELF1Q92879 486 aaKnown RBP6.01□□□□□ -1.45
CKS1B-201ENST00000308987 ZNF408Q9H9D4 720 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 DBNDD1Q9H9R9 158 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 SSU72Q9NP77 194 aaKnown RBP6.01□□□□□ -1.45
CKS1B-201ENST00000308987 POLLQ9UGP5 575 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 BRPF3Q9ULD4 1205 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 COL6A3P12111 3177 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 LAMB1P07942 1786 aa6.01□□□□□ -1.45
CKS1B-201ENST00000308987 WTIPA6NIX2 430 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms