RNA–Protein interactions for RNA: ENST00000308482.13

LRRFIP1-203, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-203ENST00000308482 MMTAG2Q9BU76 263 aaKnown RBP15.96■□□□□ 0.15
LRRFIP1-203ENST00000308482 ATXN2Q99700 1313 aaKnown RBP15.96■□□□□ 0.14
LRRFIP1-203ENST00000308482 NHSL1Q5SYE7 1610 aa15.96■□□□□ 0.14
LRRFIP1-203ENST00000308482 A6NNZ2 444 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 RAD51CO43502 376 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 ORC4O43929 436 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 KLRC1P26715 233 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 KIF5BP33176 963 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 EHHADHQ08426 723 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 TUBB8Q3ZCM7 444 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 CENPPQ6IPU0 288 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 CCDC13Q8IYE1 715 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 TLR2O60603 784 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 EVA1CP58658 441 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 LRRC41Q15345 812 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 MAN2A1Q16706 1144 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 CCDC152Q4G0S7 254 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 PDXDC1Q6P996 788 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 PNMA1Q8ND90 353 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 ZKSCAN4Q969J2 545 aaPredicted RBP15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 TANGO6Q9C0B7 1094 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 KANSL2Q9H9L4 492 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 IL17RBQ9NRM6 502 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 JAG2Q9Y219 1238 aa15.95■□□□□ 0.14
LRRFIP1-203ENST00000308482 ERVV-1B6SEH8 477 aa15.94■□□□□ 0.14
LRRFIP1-203ENST00000308482 GOLGA8HP0CJ92 632 aa15.94■□□□□ 0.14
LRRFIP1-203ENST00000308482 SETQ01105 290 aaPredicted RBP15.94■□□□□ 0.14
LRRFIP1-203ENST00000308482 ARID5AQ03989 594 aa15.94■□□□□ 0.14
LRRFIP1-203ENST00000308482 CNNM4Q6P4Q7 775 aa15.94■□□□□ 0.14
LRRFIP1-203ENST00000308482 PACSIN1Q9BY11 444 aa15.94■□□□□ 0.14
LRRFIP1-203ENST00000308482 ZNF804BA4D1E1 1349 aa15.94■□□□□ 0.14
LRRFIP1-203ENST00000308482 OR52Z1P0C646 297 aa15.94■□□□□ 0.14
LRRFIP1-203ENST00000308482 ATP6V1AP38606 617 aa15.94■□□□□ 0.14
LRRFIP1-203ENST00000308482 TFAP4Q01664 338 aa15.94■□□□□ 0.14
LRRFIP1-203ENST00000308482 ACTN3Q08043 901 aaPredicted RBP15.94■□□□□ 0.14
LRRFIP1-203ENST00000308482 KCNMA1Q12791 1236 aa15.94■□□□□ 0.14
LRRFIP1-203ENST00000308482 DDX42Q86XP3 938 aaKnown RBP eCLIP15.94■□□□□ 0.14
LRRFIP1-203ENST00000308482 GOLPH3Q9H4A6 298 aa15.94■□□□□ 0.14
LRRFIP1-203ENST00000308482 VCPKMTQ9H867 229 aa15.94■□□□□ 0.14
LRRFIP1-203ENST00000308482 MYH1P12882 1939 aa15.94■□□□□ 0.14
LRRFIP1-203ENST00000308482 MYMKA6NI61 221 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 CCDC40Q4G0X9 1142 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 MICALCLQ6ZW33 695 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 DNAAF5Q86Y56 855 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 SH3GLB2Q9NR46 395 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 KLC4Q9NSK0 619 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 MAD2L2Q9UI95 211 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 USP17L3A6NCW0 530 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 USP17L4A6NCW7 530 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 STXBP3O00186 592 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 FAM107AO95990 144 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 USP17L8P0C7I0 530 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 KLRK1P26718 216 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 TMOD1P28289 359 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 DDR1Q08345 913 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 HLTFQ14527 1009 aaKnown RBP eCLIP15.93■□□□□ 0.142e-7■□□□□ 9.9
LRRFIP1-203ENST00000308482 USP17L1Q7RTZ2 530 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 CCDC84Q86UT8 332 aaPredicted RBP15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 SPATS2Q86XZ4 545 aaKnown RBP15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 CD302Q8IX05 232 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 MREGQ8N565 214 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 CYFIP2Q96F07 1278 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 DYNLL2Q96FJ2 89 aa15.93■□□□□ 0.14
LRRFIP1-203ENST00000308482 SSBP05455 408 aaKnown RBP eCLIP15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 PCP11498 1178 aaKnown RBP15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 MECOMQ03112 1051 aa15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 QPCTQ16769 361 aa15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 YTHDF3Q7Z739 585 aaKnown RBP15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 NSUN4Q96CB9 384 aaKnown RBP15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 INPP4AQ96PE3 977 aaPredicted RBP15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 PAGR1Q9BTK6 254 aa15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 CUEDC2Q9H467 287 aa15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 A0A1B0GUL6 1792 aa15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 PRPHP41219 470 aa15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 ERVK-9P63128 1117 aa15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 TMED8Q6PL24 325 aaPredicted RBP15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 RNF10Q8N5U6 811 aaKnown RBP15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 SLC40A1Q9NP59 571 aa15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 RASSF9O75901 435 aa15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 IL6STP40189 918 aaPredicted RBP15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 TXKP42681 527 aa15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 CDC37Q16543 378 aaPredicted RBP15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 EMC10Q5UCC4 262 aa15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 LRRC55Q6ZSA7 311 aa15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 TBC1D5Q92609 795 aa15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 TMBIM4Q9HC24 238 aa15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 BLOC1S4Q9NUP1 217 aa15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 MCM9Q9NXL9 1143 aa15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 BCCIPQ9P287 314 aaKnown RBP eCLIP15.92■□□□□ 0.14
LRRFIP1-203ENST00000308482 HMGB1P1B2RPK0 211 aaPredicted RBP15.91■□□□□ 0.14
LRRFIP1-203ENST00000308482 NOL4O94818 638 aa15.91■□□□□ 0.14
LRRFIP1-203ENST00000308482 CCDC172P0C7W6 258 aa15.91■□□□□ 0.14
LRRFIP1-203ENST00000308482 PRDX5P30044 214 aa15.91■□□□□ 0.14
LRRFIP1-203ENST00000308482 HSD17B3P37058 310 aa15.91■□□□□ 0.14
LRRFIP1-203ENST00000308482 UAP1Q16222 522 aaPredicted RBP15.91■□□□□ 0.14
LRRFIP1-203ENST00000308482 C6orf89Q6UWU4 347 aa15.91■□□□□ 0.14
LRRFIP1-203ENST00000308482 MAGEF1Q9HAY2 307 aa15.91■□□□□ 0.14
LRRFIP1-203ENST00000308482 BARHL2Q9NY43 387 aa15.91■□□□□ 0.14
LRRFIP1-203ENST00000308482 A0A087X0T9 212 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms