RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 IDEP14735 1019 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 DPYDQ12882 1025 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 RILPL1Q5EBL4 403 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 FUKQ8N0W3 1084 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 CCDC43Q96MW1 224 aaKnown RBP11.5□□□□□ -0.57
MSRB3-201ENST00000308259 FAM184BQ9ULE4 1060 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 TTF2Q9UNY4 1162 aaKnown RBP11.5□□□□□ -0.57
MSRB3-201ENST00000308259 CTNND2Q9UQB3 1225 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 CTDP1Q9Y5B0 961 aaPredicted RBP11.5□□□□□ -0.57
MSRB3-201ENST00000308259 NUP188Q5SRE5 1749 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 ERVV-1B6SEH8 477 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 RPS6KA4O75676 772 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 HNRNPCP07910 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
MSRB3-201ENST00000308259 ZNF18P17022 549 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 LSP1P33241 339 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 PSMC4P43686 418 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 SLC7A5Q01650 507 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 FAM47AQ5JRC9 791 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 MORC4Q8TE76 937 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 CUL5Q93034 780 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 VPS16Q9H269 839 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 TFR2Q9UP52 801 aa11.5□□□□□ -0.57
MSRB3-201ENST00000308259 FGFR2P21802 821 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 ALDH1B1P30837 517 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 CASP14P31944 242 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 TBX2Q13207 712 aaPredicted RBP11.49□□□□□ -0.57
MSRB3-201ENST00000308259 BZW1Q7L1Q6 419 aaKnown RBP11.49□□□□□ -0.57
MSRB3-201ENST00000308259 LONP2Q86WA8 852 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 SUPT20HQ8NEM7 779 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 WASF1Q92558 559 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 SAMD15Q9P1V8 674 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 TRIM75PA6NK02 468 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 N4BP3O15049 544 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 KCNJ6P48051 423 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 ABCC12Q96J65 1359 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 SYF2O95926 243 aaKnown RBP11.49□□□□□ -0.57
MSRB3-201ENST00000308259 PAF1Q8N7H5 531 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 MLKLQ8NB16 471 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 DRAXINQ8NBI3 349 aaPredicted RBP11.49□□□□□ -0.57
MSRB3-201ENST00000308259 SRPRBQ9Y5M8 271 aaKnown RBP11.49□□□□□ -0.57
MSRB3-201ENST00000308259 C4AP0C0L4 1744 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 C4BP0C0L5 1744 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 MCM7P33993 719 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 C2orf54Q08AI8 447 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 MFN1Q8IWA4 741 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 TMCO5AQ8N6Q1 288 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 ENAHQ8N8S7 591 aaPredicted RBP11.49□□□□□ -0.57
MSRB3-201ENST00000308259 CNNM2Q9H8M5 875 aa11.49□□□□□ -0.57
MSRB3-201ENST00000308259 AKAP11Q9UKA4 1901 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 FAM237AA0A1B0GTK4 181 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 RNF225M0QZC1 329 aaPredicted RBP11.48□□□□□ -0.57
MSRB3-201ENST00000308259 APBA1Q02410 837 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 MTA1Q13330 715 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 TMED1Q13445 227 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 TSNAXIP1Q2TAA8 658 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 ENOX1Q8TC92 643 aaKnown RBP11.48□□□□□ -0.57
MSRB3-201ENST00000308259 PAGE5Q96GU1 130 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 ZC3H12CQ9C0D7 883 aaKnown RBP11.48□□□□□ -0.57
MSRB3-201ENST00000308259 ZNF232Q9UNY5 417 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 SYNRGQ9UMZ2 1314 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 PPP1R37O75864 691 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 RTN3O95197 1032 aaPredicted RBP11.48□□□□□ -0.57
MSRB3-201ENST00000308259 PARP1P09874 1014 aaKnown RBP11.48□□□□□ -0.57
MSRB3-201ENST00000308259 SARSP49591 514 aaKnown RBP11.48□□□□□ -0.57
MSRB3-201ENST00000308259 PLCD1P51178 756 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 DEUP1Q05D60 604 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 CHRNDQ07001 517 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 NR1I3Q14994 352 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 SLMAPQ14BN4 828 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 RASGRP4Q8TDF6 673 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 SNRNP27Q8WVK2 155 aaKnown RBP11.48□□□□□ -0.57
MSRB3-201ENST00000308259 KIFC2Q96AC6 838 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 FOXP1Q9H334 677 aaPredicted RBP11.48□□□□□ -0.57
MSRB3-201ENST00000308259 VIPAS39Q9H9C1 493 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 HDAC6Q9UBN7 1215 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 TLDC2A0PJX2 215 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 FXR1P51114 621 aaKnown RBP eCLIP11.48□□□□□ -0.57
MSRB3-201ENST00000308259 C16orf87Q6PH81 154 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 CLEC4GQ6UXB4 293 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 PIK3AP1Q6ZUJ8 805 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 GET4Q7L5D6 327 aaPredicted RBP11.48□□□□□ -0.57
MSRB3-201ENST00000308259 JDP2Q8WYK2 163 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 EPN3Q9H201 632 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 SLC39A2Q9NP94 309 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 TAB2Q9NYJ8 693 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 ZFATQ9P243 1243 aa11.48□□□□□ -0.57
MSRB3-201ENST00000308259 LAMB4A4D0S4 1761 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 KRT14P02533 472 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 PKN1Q16512 942 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 MUM1Q2TAK8 710 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 IFIT1BQ5T764 474 aaKnown RBP11.47□□□□□ -0.57
MSRB3-201ENST00000308259 C8orf74Q6P047 294 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 MSANTD4Q8NCY6 345 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 PKD1L3Q7Z443 1732 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 TNS2Q63HR2 1409 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 RNASE9P60153 205 aaKnown RBP11.47□□□□□ -0.57
MSRB3-201ENST00000308259 PTGDRQ13258 359 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 SOGA3Q5TF21 947 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 ARL8AQ96BM9 186 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 EPAS1Q99814 870 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms