RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 EMBQ6PCB8 327 aa14.58□□□□□ -0.08
DDX54-201ENST00000306014 SRBD1Q8N5C6 995 aaKnown RBP14.58□□□□□ -0.08
DDX54-201ENST00000306014 LIMA1Q9UHB6 759 aaKnown RBP14.58□□□□□ -0.08
DDX54-201ENST00000306014 ANO9A1A5B4 782 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 ZNF185O15231 689 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 POLD1P28340 1107 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 HSPA1LP34931 641 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 COG1Q8WTW3 980 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 RIN2Q8WYP3 895 aaPredicted RBP14.57□□□□□ -0.08
DDX54-201ENST00000306014 DCP1AQ9NPI6 582 aaPredicted RBP14.57□□□□□ -0.08
DDX54-201ENST00000306014 KIF13AQ9H1H9 1805 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 ESYT3A0FGR9 886 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 LRRC53A6NM62 1247 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 NCK2O43639 380 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 CSF1RP07333 972 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 ZBTB16Q05516 673 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 SPATS2Q86XZ4 545 aaKnown RBP14.57□□□□□ -0.08
DDX54-201ENST00000306014 MAP3K14Q99558 947 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 DCCP43146 1447 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 ATP2A1O14983 1001 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 SP4Q02446 784 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 SETDB1Q15047 1291 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 SLC44A5Q8NCS7 719 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 DDX12PQ92771 950 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 USP40Q9NVE5 1235 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 N4BP1O75113 896 aaKnown RBP14.57□□□□□ -0.08
DDX54-201ENST00000306014 SLC16A2P36021 539 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 LACTBP83111 547 aaPredicted RBP14.57□□□□□ -0.08
DDX54-201ENST00000306014 ZYXQ15942 572 aaKnown RBP14.57□□□□□ -0.08
DDX54-201ENST00000306014 ALS2CLQ60I27 953 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 PHF20Q9BVI0 1012 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 PCDHA1Q9Y5I3 950 aa14.57□□□□□ -0.08
DDX54-201ENST00000306014 PNPLA7Q6ZV29 1317 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 CCDC169A6NNP5 214 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 BUB1BO60566 1050 aaPredicted RBP14.56□□□□□ -0.08
DDX54-201ENST00000306014 BCRP11274 1271 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 CYP19A1P11511 503 aaPredicted RBP14.56□□□□□ -0.08
DDX54-201ENST00000306014 DESP17661 470 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 NR1D1P20393 614 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 GFPT1Q06210 699 aaPredicted RBP14.56□□□□□ -0.08
DDX54-201ENST00000306014 TBC1D22AQ8WUA7 517 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 TFR2Q9UP52 801 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 ZNF365Q70YC5 407 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 INTS8Q75QN2 995 aaKnown RBP14.56□□□□□ -0.08
DDX54-201ENST00000306014 TAOK1Q7L7X3 1001 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 ANKRD42Q8N9B4 389 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 PLA2G12BQ9BX93 195 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 AP1M1Q9BXS5 423 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 RNF14Q9UBS8 474 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 A0A1B0GUA9 196 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 POTEMA6NI47 508 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 FCER1AP12319 257 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 CLNS1AP54105 237 aaKnown RBP14.56□□□□□ -0.08
DDX54-201ENST00000306014 FUT8Q9BYC5 575 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 AGPAT5Q9NUQ2 364 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 CAPN11Q9UMQ6 739 aa14.56□□□□□ -0.08
DDX54-201ENST00000306014 SERPING1P05155 500 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 FOXP4Q8IVH2 680 aaPredicted RBP14.55□□□□□ -0.08
DDX54-201ENST00000306014 HPS3Q969F9 1004 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 OSBPL9Q96SU4 736 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 TCHPQ9BT92 498 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 VEZTQ9HBM0 779 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 ATP8A1Q9Y2Q0 1164 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 FAM169AQ9Y6X4 670 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 TOB1P50616 345 aaPredicted RBP14.55□□□□□ -0.08
DDX54-201ENST00000306014 LRRC63Q05C16 580 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 UBE2SQ16763 222 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 SRLQ86TD4 932 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 TADA2BQ86TJ2 420 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 IQCGQ9H095 443 aaKnown RBP14.55□□□□□ -0.08
DDX54-201ENST00000306014 PLCB1Q9NQ66 1216 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 BSDC1Q9NW68 430 aaPredicted RBP14.55□□□□□ -0.08
DDX54-201ENST00000306014 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.55□□□□□ -0.08
DDX54-201ENST00000306014 A0A1W2PQC6 194 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 PGRMC1O00264 195 aaKnown RBP14.55□□□□□ -0.08
DDX54-201ENST00000306014 PALMO75781 387 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 ATP5DP30049 168 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 PNKPQ96T60 521 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 METTL14Q9HCE5 456 aaKnown RBP14.55□□□□□ -0.08
DDX54-201ENST00000306014 EMILIN3Q9NT22 766 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.55□□□□□ -0.08
DDX54-201ENST00000306014 IFNAR2P48551 515 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 SCNN1DP51172 638 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 STAG2Q8N3U4 1231 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 IFT74Q96LB3 600 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 TMEM47Q9BQJ4 181 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 SYNCQ9H7C4 482 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 SH3GLB2Q9NR46 395 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 HOMER2Q9NSB8 354 aa14.55□□□□□ -0.08
DDX54-201ENST00000306014 MEIS1O00470 390 aa14.54□□□□□ -0.08
DDX54-201ENST00000306014 CD44P16070 742 aaKnown RBP14.54□□□□□ -0.08
DDX54-201ENST00000306014 VPS41P49754 854 aa14.54□□□□□ -0.08
DDX54-201ENST00000306014 BIRC3Q13489 604 aa14.54□□□□□ -0.08
DDX54-201ENST00000306014 TRIM65Q6PJ69 517 aa14.54□□□□□ -0.08
DDX54-201ENST00000306014 KCTD1Q719H9 257 aa14.54□□□□□ -0.08
DDX54-201ENST00000306014 GJD4Q96KN9 370 aaPredicted RBP14.54□□□□□ -0.08
DDX54-201ENST00000306014 MINPP1Q9UNW1 487 aa14.54□□□□□ -0.08
DDX54-201ENST00000306014 MST1RQ04912 1400 aa14.54□□□□□ -0.08
DDX54-201ENST00000306014 CLIC2O15247 247 aa14.54□□□□□ -0.08
DDX54-201ENST00000306014 DHX9Q08211 1270 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms