RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 FAM86B2P0C5J1 330 aa30.87■■■□□ 2.53
HDAC3-201ENST00000305264 XRCC5P13010 732 aaKnown RBP30.87■■■□□ 2.53
HDAC3-201ENST00000305264 PDE4DQ08499 809 aa30.87■■■□□ 2.53
HDAC3-201ENST00000305264 ARHGEF6Q15052 776 aa30.87■■■□□ 2.53
HDAC3-201ENST00000305264 TTC38Q5R3I4 469 aa30.87■■■□□ 2.53
HDAC3-201ENST00000305264 CYP2W1Q8TAV3 490 aa30.87■■■□□ 2.53
HDAC3-201ENST00000305264 MORC4Q8TE76 937 aa30.87■■■□□ 2.53
HDAC3-201ENST00000305264 TRIM17Q9Y577 477 aa30.87■■■□□ 2.53
HDAC3-201ENST00000305264 PCDHB6Q9Y5E3 794 aa30.87■■■□□ 2.53
HDAC3-201ENST00000305264 LOC102724159A0A0B4J2E5 919 aa30.86■■■□□ 2.53
HDAC3-201ENST00000305264 CCNT1O60563 726 aaKnown RBP30.86■■■□□ 2.53
HDAC3-201ENST00000305264 LBX1P52954 281 aa30.86■■■□□ 2.53
HDAC3-201ENST00000305264 PWP2Q15269 919 aaKnown RBP30.86■■■□□ 2.53
HDAC3-201ENST00000305264 MAMDC4Q6UXC1 1216 aa30.86■■■□□ 2.53
HDAC3-201ENST00000305264 TINF2Q9BSI4 451 aa30.86■■■□□ 2.53
HDAC3-201ENST00000305264 RTEL1Q9NZ71 1219 aa30.86■■■□□ 2.53
HDAC3-201ENST00000305264 KIAA1217Q5T5P2 1943 aa30.86■■■□□ 2.53
HDAC3-201ENST00000305264 CIITAP33076 1130 aa30.85■■■□□ 2.53
HDAC3-201ENST00000305264 CTCFP49711 727 aaPredicted RBP30.85■■■□□ 2.53
HDAC3-201ENST00000305264 STXBP2Q15833 593 aa30.85■■■□□ 2.53
HDAC3-201ENST00000305264 XRRA1Q6P2D8 792 aa30.85■■■□□ 2.53
HDAC3-201ENST00000305264 MPHOSPH6Q99547 160 aaKnown RBP30.85■■■□□ 2.53
HDAC3-201ENST00000305264 ITGB5P18084 799 aa30.85■■■□□ 2.53
HDAC3-201ENST00000305264 ZNF76P36508 570 aa30.85■■■□□ 2.53
HDAC3-201ENST00000305264 OLFML2BQ68BL8 750 aa30.85■■■□□ 2.53
HDAC3-201ENST00000305264 EEPD1Q7L9B9 569 aa30.85■■■□□ 2.53
HDAC3-201ENST00000305264 TRIB2Q92519 343 aa30.85■■■□□ 2.53
HDAC3-201ENST00000305264 TCHHQ07283 1943 aa30.84■■■□□ 2.53
HDAC3-201ENST00000305264 B4DLN1 442 aa30.84■■■□□ 2.53
HDAC3-201ENST00000305264 SLC37A4O43826 429 aa30.84■■■□□ 2.53
HDAC3-201ENST00000305264 RGS20O76081 388 aa30.84■■■□□ 2.53
HDAC3-201ENST00000305264 IGHA2P01877 340 aa30.84■■■□□ 2.53
HDAC3-201ENST00000305264 MCM7P33993 719 aa30.84■■■□□ 2.53
HDAC3-201ENST00000305264 DNM1Q05193 864 aaKnown RBP30.84■■■□□ 2.53
HDAC3-201ENST00000305264 IRF5Q13568 498 aa30.84■■■□□ 2.53
HDAC3-201ENST00000305264 ZNF174Q15697 407 aa30.84■■■□□ 2.53
HDAC3-201ENST00000305264 CEP55Q53EZ4 464 aa30.84■■■□□ 2.53
HDAC3-201ENST00000305264 UBIAD1Q9Y5Z9 338 aa30.84■■■□□ 2.53
HDAC3-201ENST00000305264 SYNGAP1Q96PV0 1343 aa30.84■■■□□ 2.53
HDAC3-201ENST00000305264 IGLV3-22A0A075B6J6 115 aa30.83■■■□□ 2.53
HDAC3-201ENST00000305264 CYP3A7-CYP3A51PA0A087WV96 503 aa30.83■■■□□ 2.53
HDAC3-201ENST00000305264 SNAI1O95863 264 aaPredicted RBP30.83■■■□□ 2.53
HDAC3-201ENST00000305264 CYP3A7P24462 503 aa30.83■■■□□ 2.53
HDAC3-201ENST00000305264 PPP4R3AQ6IN85 833 aa30.83■■■□□ 2.53
HDAC3-201ENST00000305264 MOXD1Q6UVY6 613 aa30.83■■■□□ 2.53
HDAC3-201ENST00000305264 FBXO16Q8IX29 292 aaPredicted RBP30.83■■■□□ 2.53
HDAC3-201ENST00000305264 MSL3Q8N5Y2 521 aaKnown RBP30.83■■■□□ 2.53
HDAC3-201ENST00000305264 LENG9Q96B70 501 aa30.83■■■□□ 2.53
HDAC3-201ENST00000305264 USP28Q96RU2 1077 aa30.83■■■□□ 2.53
HDAC3-201ENST00000305264 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.83■■■□□ 2.53
HDAC3-201ENST00000305264 PRR16Q569H4 304 aa30.83■■■□□ 2.53
HDAC3-201ENST00000305264 MBOAT7Q96N66 472 aa30.83■■■□□ 2.53
HDAC3-201ENST00000305264 MXRA8Q9BRK3 442 aa30.83■■■□□ 2.53
HDAC3-201ENST00000305264 DDX25Q9UHL0 483 aaKnown RBP30.83■■■□□ 2.53
HDAC3-201ENST00000305264 ATP6V1DQ9Y5K8 247 aa30.83■■■□□ 2.53
HDAC3-201ENST00000305264 EIF3JO75822 258 aaKnown RBP30.82■■■□□ 2.52
HDAC3-201ENST00000305264 GCFC2P16383 781 aaKnown RBP30.82■■■□□ 2.52
HDAC3-201ENST00000305264 CYP2C19P33261 490 aa30.82■■■□□ 2.52
HDAC3-201ENST00000305264 RAET1EQ8TD07 263 aa30.82■■■□□ 2.52
HDAC3-201ENST00000305264 TNPO1Q92973 898 aaKnown RBP30.82■■■□□ 2.52
HDAC3-201ENST00000305264 INPP4AQ96PE3 977 aaPredicted RBP30.82■■■□□ 2.52
HDAC3-201ENST00000305264 WDR11Q9BZH6 1224 aa30.82■■■□□ 2.52
HDAC3-201ENST00000305264 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.82■■■□□ 2.52
HDAC3-201ENST00000305264 CLIC4Q9Y696 253 aa30.82■■■□□ 2.52
HDAC3-201ENST00000305264 ELNP15502 786 aa30.81■■■□□ 2.52
HDAC3-201ENST00000305264 CEBPZQ03701 1054 aaKnown RBP30.81■■■□□ 2.52
HDAC3-201ENST00000305264 POTEDQ86YR6 584 aa30.81■■■□□ 2.52
HDAC3-201ENST00000305264 TFIP11Q9UBB9 837 aaKnown RBP30.81■■■□□ 2.52
HDAC3-201ENST00000305264 KATNBL1Q9H079 304 aa30.81■■■□□ 2.52
HDAC3-201ENST00000305264 MEIS1O00470 390 aa30.8■■■□□ 2.52
HDAC3-201ENST00000305264 STAM2O75886 525 aa30.8■■■□□ 2.52
HDAC3-201ENST00000305264 PRMT2P55345 433 aa30.8■■■□□ 2.52
HDAC3-201ENST00000305264 ZNF396Q96N95 335 aaPredicted RBP30.8■■■□□ 2.52
HDAC3-201ENST00000305264 NAP1L4Q99733 375 aaKnown RBP30.8■■■□□ 2.52
HDAC3-201ENST00000305264 JADE2Q9NQC1 790 aa30.8■■■□□ 2.52
HDAC3-201ENST00000305264 ADCY3O60266 1144 aa30.79■■■□□ 2.52
HDAC3-201ENST00000305264 SF3A1Q15459 793 aaKnown RBP30.79■■■□□ 2.52
HDAC3-201ENST00000305264 Q4G0T1 1027 aa30.79■■■□□ 2.52
HDAC3-201ENST00000305264 PLA2G4DQ86XP0 818 aa30.79■■■□□ 2.52
HDAC3-201ENST00000305264 PTCH2Q9Y6C5 1203 aa30.79■■■□□ 2.52
HDAC3-201ENST00000305264 NEMFO60524 1076 aa30.79■■■□□ 2.52
HDAC3-201ENST00000305264 ANO1Q5XXA6 986 aa30.79■■■□□ 2.52
HDAC3-201ENST00000305264 SEPT14Q6ZU15 432 aa30.79■■■□□ 2.52
HDAC3-201ENST00000305264 UIMC1Q96RL1 719 aa30.79■■■□□ 2.52
HDAC3-201ENST00000305264 ARP10275 920 aa30.78■■■□□ 2.52
HDAC3-201ENST00000305264 SEMA3FQ13275 785 aa30.78■■■□□ 2.52
HDAC3-201ENST00000305264 MTMR1Q13613 665 aa30.78■■■□□ 2.52
HDAC3-201ENST00000305264 TMEM60Q9H2L4 133 aa30.78■■■□□ 2.52
HDAC3-201ENST00000305264 MRVI1Q9Y6F6 885 aa30.78■■■□□ 2.52
HDAC3-201ENST00000305264 SETQ01105 290 aaPredicted RBP30.77■■■□□ 2.52
HDAC3-201ENST00000305264 NIPA1Q7RTP0 329 aa30.77■■■□□ 2.52
HDAC3-201ENST00000305264 GPRASP2Q96D09 838 aa30.77■■■□□ 2.52
HDAC3-201ENST00000305264 VTA1Q9NP79 307 aa30.77■■■□□ 2.52
HDAC3-201ENST00000305264 KCNH7Q9NS40 1196 aa30.77■■■□□ 2.52
HDAC3-201ENST00000305264 POLR3EQ9NVU0 708 aa30.77■■■□□ 2.52
HDAC3-201ENST00000305264 TRIM32Q13049 653 aa30.77■■■□□ 2.52
HDAC3-201ENST00000305264 GNPTABQ3T906 1256 aa30.77■■■□□ 2.52
HDAC3-201ENST00000305264 PRAMEF19Q5SWL8 479 aa30.77■■■□□ 2.52
HDAC3-201ENST00000305264 TRMT44Q8IYL2 757 aaKnown RBP30.77■■■□□ 2.52
HDAC3-201ENST00000305264 PDGFCQ9NRA1 345 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms