RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 LRRC2Q9BYS8 371 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 SLC12A7Q9Y666 1083 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 SCN10AQ9Y5Y9 1956 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 TANC1Q9C0D5 1861 aa12.57□□□□□ -0.4
HMGN1P35-201ENST00000303758 B4GALT4O60513 344 aa12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 SUPT20HL2P0C7V6 817 aa12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 RXRAP19793 462 aa12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 CCND2P30279 289 aa12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 CYP2C18P33260 490 aa12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 LIFRP42702 1097 aa12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 EPHB4P54760 987 aa12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 GHRHRQ02643 423 aa12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 SLC35G1Q2M3R5 365 aa12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 PSRC1Q6PGN9 363 aaPredicted RBP12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 MICU3Q86XE3 530 aa12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 CUL5Q93034 780 aa12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 NEK1Q96PY6 1258 aa12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 PDCD2LQ9BRP1 358 aa12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 TRPV6Q9H1D0 765 aa12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 ALDH8A1Q9H2A2 487 aaPredicted RBP12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 NOD1Q9Y239 953 aa12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 GRIN2DO15399 1336 aa12.56□□□□□ -0.4
HMGN1P35-201ENST00000303758 A6NJR5 290 aa12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 PLEKHA8P1O95397 391 aa12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 MMP3P08254 477 aa12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 CSF2RAP15509 400 aa12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 FGD1P98174 961 aa12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 ARHGAP1Q07960 439 aa12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 KRT32Q14532 448 aa12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 PGM5Q15124 567 aa12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 NBPF20Q3BBV1 942 aa12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 CCDC62Q6P9F0 684 aa12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 KCNV1Q6PIU1 500 aa12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 RAB11FIP4Q86YS3 637 aa12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 DHX37Q8IY37 1157 aaKnown RBP12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 SMARCC2Q8TAQ2 1214 aa12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 AFG1LQ8WV93 481 aa12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 FAM161BQ96MY7 647 aa12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 MTIF3Q9H2K0 278 aaKnown RBP12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 COL6A3P12111 3177 aa12.55□□□□□ -0.4
HMGN1P35-201ENST00000303758 ACRP10323 421 aa12.54□□□□□ -0.4
HMGN1P35-201ENST00000303758 CASTP20810 708 aaKnown RBP12.54□□□□□ -0.4
HMGN1P35-201ENST00000303758 SMARCA1P28370 1054 aa12.54□□□□□ -0.4
HMGN1P35-201ENST00000303758 FXR2P51116 673 aaKnown RBP eCLIP12.54□□□□□ -0.4
HMGN1P35-201ENST00000303758 CCL23P55773 120 aa12.54□□□□□ -0.4
HMGN1P35-201ENST00000303758 SMAD3P84022 425 aaKnown RBP12.54□□□□□ -0.4
HMGN1P35-201ENST00000303758 DGKDQ16760 1214 aa12.54□□□□□ -0.4
HMGN1P35-201ENST00000303758 GNPTABQ3T906 1256 aa12.54□□□□□ -0.4
HMGN1P35-201ENST00000303758 NFRKBQ6P4R8 1299 aa12.54□□□□□ -0.4
HMGN1P35-201ENST00000303758 CMTR1Q8N1G2 835 aaKnown RBP12.54□□□□□ -0.4
HMGN1P35-201ENST00000303758 IL23AQ9NPF7 189 aa12.54□□□□□ -0.4
HMGN1P35-201ENST00000303758 TRMT13Q9NUP7 481 aaKnown RBP12.54□□□□□ -0.4
HMGN1P35-201ENST00000303758 DDX41Q9UJV9 622 aaKnown RBP12.54□□□□□ -0.4
HMGN1P35-201ENST00000303758 DOCK5Q9H7D0 1870 aa12.54□□□□□ -0.4
HMGN1P35-201ENST00000303758 UMODL1Q5DID0 1318 aa12.54□□□□□ -0.4
HMGN1P35-201ENST00000303758 SORBS3O60504 671 aa12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 PTPN11Q06124 597 aaPredicted RBP12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 LAMC2Q13753 1193 aa12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 FAM109BQ6ICB4 259 aaPredicted RBP12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 VSIG10LQ86VR7 867 aa12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 SGMS1Q86VZ5 419 aa12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 CCDC82Q8N4S0 544 aa12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 SRBD1Q8N5C6 995 aaKnown RBP12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 FANCBQ8NB91 859 aa12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 SPDYE1Q8NFV5 336 aaPredicted RBP12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 IL31RAQ8NI17 732 aa12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 PPP1R13LQ8WUF5 828 aa12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 TCEANC2Q96MN5 208 aa12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 NOC4LQ9BVI4 516 aaKnown RBP12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 KATNAL1Q9BW62 490 aa12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 MTMR10Q9NXD2 777 aa12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 NAP1L2Q9ULW6 460 aaPredicted RBP12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 GBF1Q92538 1859 aa12.53□□□□□ -0.4
HMGN1P35-201ENST00000303758 SCN5AQ14524 2016 aa12.52□□□□□ -0.4
HMGN1P35-201ENST00000303758 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 ZBTB43O43298 467 aa12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 GGPS1O95749 300 aa12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 HMGB1P09429 215 aaKnown RBP12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 CYP2C9P11712 490 aa12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 COL9A3Q14050 684 aaPredicted RBP12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 TMEM240Q5SV17 173 aa12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 TMTC3Q6ZXV5 915 aa12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 ZNF365Q70YC5 407 aa12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 DHX32Q7L7V1 743 aaKnown RBP12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 RPUSD2Q8IZ73 545 aaKnown RBP12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 CCDC155Q8N6L0 562 aa12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 PPTC7Q8NI37 304 aa12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 EMID1Q96A84 441 aaPredicted RBP12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 ZFP91Q96JP5 570 aaPredicted RBP12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 MLXIPQ9HAP2 919 aa12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.41
HMGN1P35-201ENST00000303758 hCG_1642624A0A1W2PR95 340 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 GOLGA8AA7E2F4 631 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 GOLGA8BA8MQT2 603 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 STAM2O75886 525 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 FGBP02675 491 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 ZNF286BP0CG31 522 aa12.51□□□□□ -0.41
HMGN1P35-201ENST00000303758 TGFB3P10600 412 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms