RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 UIMC1Q96RL1 719 aa14.65□□□□□ -0.06
CCDC7-202ENST00000302316 PCDHA12Q9UN75 941 aa14.65□□□□□ -0.06
CCDC7-202ENST00000302316 TBX3O15119 743 aa14.65□□□□□ -0.06
CCDC7-202ENST00000302316 XRCC6P12956 609 aaKnown RBP eCLIP14.65□□□□□ -0.06
CCDC7-202ENST00000302316 OSBPP22059 807 aa14.65□□□□□ -0.06
CCDC7-202ENST00000302316 HERVK_113P62684 666 aa14.65□□□□□ -0.06
CCDC7-202ENST00000302316 MKRN3Q13064 507 aaKnown RBP14.65□□□□□ -0.06
CCDC7-202ENST00000302316 PDIA5Q14554 519 aa14.65□□□□□ -0.06
CCDC7-202ENST00000302316 RRAGBQ5VZM2 374 aa14.65□□□□□ -0.06
CCDC7-202ENST00000302316 CYP2W1Q8TAV3 490 aa14.65□□□□□ -0.06
CCDC7-202ENST00000302316 PAGR1Q9BTK6 254 aa14.65□□□□□ -0.06
CCDC7-202ENST00000302316 BTBD7Q9P203 1132 aa14.65□□□□□ -0.06
CCDC7-202ENST00000302316 IGLV3-22A0A075B6J6 115 aa14.64□□□□□ -0.07
CCDC7-202ENST00000302316 A0A087WWV3 80 aa14.64□□□□□ -0.07
CCDC7-202ENST00000302316 PRR29P0C7W0 189 aa14.64□□□□□ -0.07
CCDC7-202ENST00000302316 MDM2Q00987 491 aaPredicted RBP14.64□□□□□ -0.07
CCDC7-202ENST00000302316 BAATQ14032 418 aaPredicted RBP14.64□□□□□ -0.07
CCDC7-202ENST00000302316 GPAT2Q6NUI2 795 aa14.64□□□□□ -0.07
CCDC7-202ENST00000302316 PDXDC2PQ6P474 469 aa14.64□□□□□ -0.07
CCDC7-202ENST00000302316 PAGE5Q96GU1 130 aa14.64□□□□□ -0.07
CCDC7-202ENST00000302316 DNAJC25Q9H1X3 360 aa14.64□□□□□ -0.07
CCDC7-202ENST00000302316 ANO10Q9NW15 660 aa14.64□□□□□ -0.07
CCDC7-202ENST00000302316 FRMPD4Q14CM0 1322 aa14.64□□□□□ -0.07
CCDC7-202ENST00000302316 BIN1O00499 593 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 PEX10O60683 326 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 ITGBL1O95965 494 aaPredicted RBP14.63□□□□□ -0.07
CCDC7-202ENST00000302316 AFMP43652 599 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 CEP55Q53EZ4 464 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 KRT79Q5XKE5 535 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 POTEEQ6S8J3 1075 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 PLA2G4DQ86XP0 818 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 IL31RAQ8NI17 732 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 SNX29Q8TEQ0 813 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 CALML4Q96GE6 196 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 FAM20AQ96MK3 541 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 TAAR1Q96RJ0 339 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 PLIN2Q99541 437 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 TUBE1Q9UJT0 475 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 MSH4O15457 936 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 PLCG1P19174 1290 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 EIF2AK2P19525 551 aaKnown RBP14.63□□□□□ -0.07
CCDC7-202ENST00000302316 GTF2A2P52657 109 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 SETQ01105 290 aaPredicted RBP14.63□□□□□ -0.07
CCDC7-202ENST00000302316 RIOX2Q8IUF8 465 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 CHST13Q8NET6 341 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 FAM200AQ8TCP9 573 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 CDK5RAP3Q96JB5 506 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 RMDN3Q96TC7 470 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 MMTAG2Q9BU76 263 aaKnown RBP14.63□□□□□ -0.07
CCDC7-202ENST00000302316 SPATC1LQ9H0A9 340 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 A1CFQ9NQ94 594 aaKnown RBP14.63□□□□□ -0.07
CCDC7-202ENST00000302316 PCDHA5Q9Y5H7 936 aa14.63□□□□□ -0.07
CCDC7-202ENST00000302316 CETPP11597 493 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 NAALADL2Q58DX5 795 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 ARHGEF16Q5VV41 709 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 CST9Q5W186 159 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 PCNX4Q63HM2 1172 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 SH3RF1Q7Z6J0 888 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 SMARCE1Q969G3 411 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 ZFP91Q96JP5 570 aaPredicted RBP14.62□□□□□ -0.07
CCDC7-202ENST00000302316 PXMP2Q9NR77 195 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 PNMA3Q9UL41 463 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 CCL15-CCL14A0A0B4J2E2 113 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 NLRP12P59046 1061 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 PGM5Q15124 567 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 CCL15Q16663 113 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 C11orf57Q6ZUT1 292 aaPredicted RBP14.62□□□□□ -0.07
CCDC7-202ENST00000302316 STAMQ92783 540 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 MS4A4AQ96JQ5 239 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 PURBQ96QR8 312 aaKnown RBP14.62□□□□□ -0.07
CCDC7-202ENST00000302316 MXRA8Q9BRK3 442 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 PDCD2LQ9BRP1 358 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 CUEDC2Q9H467 287 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 CYP39A1Q9NYL5 469 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 FBXO40Q9UH90 709 aa14.62□□□□□ -0.07
CCDC7-202ENST00000302316 TRPM7Q96QT4 1865 aa14.61□□□□□ -0.07
CCDC7-202ENST00000302316 CNMDO75829 334 aa14.61□□□□□ -0.07
CCDC7-202ENST00000302316 SMC2O95347 1197 aa14.61□□□□□ -0.07
CCDC7-202ENST00000302316 CAVIN2O95810 425 aa14.61□□□□□ -0.07
CCDC7-202ENST00000302316 HUNKP57058 714 aa14.61□□□□□ -0.07
CCDC7-202ENST00000302316 DPCR1Q3MIW9 517 aa14.61□□□□□ -0.07
CCDC7-202ENST00000302316 ISM2Q6H9L7 571 aa14.61□□□□□ -0.07
CCDC7-202ENST00000302316 NCAPG2Q86XI2 1143 aa14.61□□□□□ -0.07
CCDC7-202ENST00000302316 MEIS1O00470 390 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 ZBTB48P10074 688 aaPredicted RBP14.6□□□□□ -0.07
CCDC7-202ENST00000302316 MYCLP12524 364 aaPredicted RBP14.6□□□□□ -0.07
CCDC7-202ENST00000302316 CASP1P29466 404 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 ZNF165P49910 485 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 GRB10Q13322 594 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 SPRYD7Q5W111 196 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 NCAPH2Q6IBW4 605 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 ANKRD35Q8N283 1001 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 MAF1Q9H063 256 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 MAGEF1Q9HAY2 307 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 CBX8Q9HC52 389 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 KDM3AQ9Y4C1 1321 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 ITGB5P18084 799 aa14.6□□□□□ -0.07
CCDC7-202ENST00000302316 CCT6AP40227 531 aaKnown RBP14.6□□□□□ -0.07
CCDC7-202ENST00000302316 MRPS9P82933 396 aaKnown RBP14.6□□□□□ -0.07
CCDC7-202ENST00000302316 SPIRE1Q08AE8 756 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms