RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 NAP1L5Q96NT1 182 aaPredicted RBP25.02■■□□□ 1.6
SMAD1-201ENST00000302085 CTNND2Q9UQB3 1225 aa25.02■■□□□ 1.6
SMAD1-201ENST00000302085 SYNRGQ9UMZ2 1314 aa25.01■■□□□ 1.59
SMAD1-201ENST00000302085 MSH4O15457 936 aa25.01■■□□□ 1.59
SMAD1-201ENST00000302085 USP2O75604 605 aaPredicted RBP25.01■■□□□ 1.59
SMAD1-201ENST00000302085 ZNF76P36508 570 aa25.01■■□□□ 1.59
SMAD1-201ENST00000302085 STAT3P40763 770 aa25.01■■□□□ 1.59
SMAD1-201ENST00000302085 SPIRE1Q08AE8 756 aa25.01■■□□□ 1.59
SMAD1-201ENST00000302085 SEMA3FQ13275 785 aa25.01■■□□□ 1.59
SMAD1-201ENST00000302085 HYIQ5T013 277 aa25.01■■□□□ 1.59
SMAD1-201ENST00000302085 CPXCR1Q8N123 301 aa25.01■■□□□ 1.59
SMAD1-201ENST00000302085 LARP4BQ92615 738 aaKnown RBP25.01■■□□□ 1.59
SMAD1-201ENST00000302085 FAM20AQ96MK3 541 aa25.01■■□□□ 1.59
SMAD1-201ENST00000302085 RAVER2Q9HCJ3 691 aaKnown RBP25.01■■□□□ 1.59
SMAD1-201ENST00000302085 IGLV3-22A0A075B6J6 115 aa25■■□□□ 1.59
SMAD1-201ENST00000302085 CCT6AP40227 531 aaKnown RBP25■■□□□ 1.59
SMAD1-201ENST00000302085 PRCPP42785 496 aa25■■□□□ 1.59
SMAD1-201ENST00000302085 PRKG1Q13976 671 aa25■■□□□ 1.59
SMAD1-201ENST00000302085 NOL9Q5SY16 702 aaKnown RBP25■■□□□ 1.59
SMAD1-201ENST00000302085 MYMKA6NI61 221 aa25■■□□□ 1.59
SMAD1-201ENST00000302085 COBLO75128 1261 aa25■■□□□ 1.59
SMAD1-201ENST00000302085 HSD17B4P51659 736 aa25■■□□□ 1.59
SMAD1-201ENST00000302085 GIMAP8Q8ND71 665 aaPredicted RBP25■■□□□ 1.59
SMAD1-201ENST00000302085 RWDD2AQ9UIY3 292 aa25■■□□□ 1.59
SMAD1-201ENST00000302085 CBFA2T2O43439 604 aa24.99■■□□□ 1.59
SMAD1-201ENST00000302085 CDK11BP21127 795 aaKnown RBP24.99■■□□□ 1.59
SMAD1-201ENST00000302085 ASIC1P78348 528 aa24.99■■□□□ 1.59
SMAD1-201ENST00000302085 LRMPQ12912 555 aa24.99■■□□□ 1.59
SMAD1-201ENST00000302085 FILIP1Q7Z7B0 1213 aa24.99■■□□□ 1.59
SMAD1-201ENST00000302085 ADSSL1Q8N142 457 aa24.99■■□□□ 1.59
SMAD1-201ENST00000302085 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.99■■□□□ 1.59
SMAD1-201ENST00000302085 CACTINQ8WUQ7 758 aaKnown RBP24.99■■□□□ 1.59
SMAD1-201ENST00000302085 MAPK8IP1Q9UQF2 711 aa24.99■■□□□ 1.59
SMAD1-201ENST00000302085 NFIBO00712 420 aa24.98■■□□□ 1.59
SMAD1-201ENST00000302085 HMGCS2P54868 508 aa24.98■■□□□ 1.59
SMAD1-201ENST00000302085 UBXN2AP68543 259 aa24.98■■□□□ 1.59
SMAD1-201ENST00000302085 ARID5BQ14865 1188 aa24.98■■□□□ 1.59
SMAD1-201ENST00000302085 NELFBQ8WX92 580 aa24.98■■□□□ 1.59
SMAD1-201ENST00000302085 C12orf42Q96LP6 360 aa24.98■■□□□ 1.59
SMAD1-201ENST00000302085 PYCARDQ9ULZ3 195 aa24.98■■□□□ 1.59
SMAD1-201ENST00000302085 PHIPQ8WWQ0 1821 aa24.98■■□□□ 1.59
SMAD1-201ENST00000302085 C19orf81C9J6K1 198 aa24.98■■□□□ 1.59
SMAD1-201ENST00000302085 SLC26A4O43511 780 aa24.98■■□□□ 1.59
SMAD1-201ENST00000302085 CDKAL1Q5VV42 579 aa24.98■■□□□ 1.59
SMAD1-201ENST00000302085 TMC6Q7Z403 805 aa24.98■■□□□ 1.59
SMAD1-201ENST00000302085 INTS13Q9NVM9 706 aa24.98■■□□□ 1.59
SMAD1-201ENST00000302085 IMPACTQ9P2X3 320 aa24.98■■□□□ 1.59
SMAD1-201ENST00000302085 ALAS1P13196 640 aa24.97■■□□□ 1.59
SMAD1-201ENST00000302085 PAK1Q13153 545 aa24.97■■□□□ 1.59
SMAD1-201ENST00000302085 DCPSQ96C86 337 aaKnown RBP24.97■■□□□ 1.59
SMAD1-201ENST00000302085 EHMT1Q9H9B1 1298 aa24.97■■□□□ 1.59
SMAD1-201ENST00000302085 KDM3AQ9Y4C1 1321 aa24.97■■□□□ 1.59
SMAD1-201ENST00000302085 ADM5C9JUS6 153 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 VWA5AO00534 786 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 ZBED4O75132 1171 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 GHRHRQ02643 423 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 PDE4DQ08499 809 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 MUM1L1Q5H9M0 696 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 ATG4CQ96DT6 458 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 WNK4Q96J92 1243 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 NT5C3AQ9H0P0 336 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 COL20A1Q9P218 1284 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 VAV3Q9UKW4 847 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 KIAA1024Q9UPX6 916 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 AFG3L2Q9Y4W6 797 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 MED24O75448 989 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 CNNM4Q6P4Q7 775 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 MCF2L2Q86YR7 1114 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 LRRC8AQ8IWT6 810 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 CCDC47Q96A33 483 aaKnown RBP24.96■■□□□ 1.59
SMAD1-201ENST00000302085 EXOC1Q9NV70 894 aa24.96■■□□□ 1.59
SMAD1-201ENST00000302085 NCAPH2Q6IBW4 605 aa24.95■■□□□ 1.58
SMAD1-201ENST00000302085 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.95■■□□□ 1.58
SMAD1-201ENST00000302085 KIAA1524Q8TCG1 905 aa24.95■■□□□ 1.58
SMAD1-201ENST00000302085 ZFP91Q96JP5 570 aaPredicted RBP24.95■■□□□ 1.58
SMAD1-201ENST00000302085 POTEB3A0JP26 581 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 POTECB2RU33 542 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 FDX1P10109 184 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 MAP3K9P80192 1104 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 STK4Q13043 487 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 POTEBQ6S5H4 581 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 APTXQ7Z2E3 356 aaKnown RBP24.94■■□□□ 1.58
SMAD1-201ENST00000302085 SULF1Q8IWU6 871 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 C17orf53Q8N3J3 647 aaPredicted RBP24.94■■□□□ 1.58
SMAD1-201ENST00000302085 HOMER2Q9NSB8 354 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 CTDP1Q9Y5B0 961 aaPredicted RBP24.94■■□□□ 1.58
SMAD1-201ENST00000302085 RPTORQ8N122 1335 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 PVALEFA0A1B0GWK0 134 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 E9PMD0 336 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 CEP55Q53EZ4 464 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 UNC13DQ70J99 1090 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 DYMQ7RTS9 669 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 CATSPER3Q86XQ3 398 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 VSTM4Q8IW00 320 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 LRRC27Q9C0I9 530 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 SNCAIPQ9Y6H5 919 aa24.94■■□□□ 1.58
SMAD1-201ENST00000302085 PARP14Q460N5 1801 aa24.93■■□□□ 1.58
SMAD1-201ENST00000302085 MEIS1O00470 390 aa24.93■■□□□ 1.58
SMAD1-201ENST00000302085 SPATA31C1P0DKV0 1188 aa24.93■■□□□ 1.58
SMAD1-201ENST00000302085 FCER1AP12319 257 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms