RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 CCDC82Q8N4S0 544 aa17.37■□□□□ 0.37
UBXN1-202ENST00000301935 PCSK9Q8NBP7 692 aaKnown RBP17.37■□□□□ 0.37
UBXN1-202ENST00000301935 SPRYD3Q8NCJ5 442 aa17.37■□□□□ 0.37
UBXN1-202ENST00000301935 CHST13Q8NET6 341 aa17.37■□□□□ 0.37
UBXN1-202ENST00000301935 PHKBQ93100 1093 aa17.37■□□□□ 0.37
UBXN1-202ENST00000301935 MTMR8Q96EF0 704 aa17.37■□□□□ 0.37
UBXN1-202ENST00000301935 UBA5Q9GZZ9 404 aa17.37■□□□□ 0.37
UBXN1-202ENST00000301935 UPF3AQ9H1J1 476 aaKnown RBP17.37■□□□□ 0.37
UBXN1-202ENST00000301935 FOXD4L1Q9NU39 408 aa17.37■□□□□ 0.37
UBXN1-202ENST00000301935 PNMA6FA0A0J9YX94 578 aa17.36■□□□□ 0.37
UBXN1-202ENST00000301935 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.36■□□□□ 0.37
UBXN1-202ENST00000301935 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.36■□□□□ 0.37
UBXN1-202ENST00000301935 NUCB2P80303 420 aa17.36■□□□□ 0.37
UBXN1-202ENST00000301935 TRIM29Q14134 588 aa17.36■□□□□ 0.37
UBXN1-202ENST00000301935 PFKFB3Q16875 520 aaPredicted RBP17.36■□□□□ 0.37
UBXN1-202ENST00000301935 CCDC144BQ3MJ40 725 aa17.36■□□□□ 0.37
UBXN1-202ENST00000301935 LARP1BQ659C4 914 aaKnown RBP17.36■□□□□ 0.37
UBXN1-202ENST00000301935 TTBK2Q6IQ55 1244 aa17.36■□□□□ 0.37
UBXN1-202ENST00000301935 MFSD5Q6N075 450 aa17.36■□□□□ 0.37
UBXN1-202ENST00000301935 ARMCX2Q7L311 632 aa17.36■□□□□ 0.37
UBXN1-202ENST00000301935 CCDC12Q8WUD4 166 aaPredicted RBP17.36■□□□□ 0.37
UBXN1-202ENST00000301935 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.36■□□□□ 0.371e-7■■□□□ 11.9
UBXN1-202ENST00000301935 JMJD4Q9H9V9 463 aa17.36■□□□□ 0.37
UBXN1-202ENST00000301935 SPC25Q9HBM1 224 aa17.36■□□□□ 0.37
UBXN1-202ENST00000301935 SH3GLB2Q9NR46 395 aa17.36■□□□□ 0.37
UBXN1-202ENST00000301935 A0A0U1RQG5 324 aaPredicted RBP17.35■□□□□ 0.37
UBXN1-202ENST00000301935 ZBTB5O15062 677 aa17.35■□□□□ 0.37
UBXN1-202ENST00000301935 CYTH3O43739 400 aa17.35■□□□□ 0.37
UBXN1-202ENST00000301935 SCG2P13521 617 aa17.35■□□□□ 0.37
UBXN1-202ENST00000301935 FDPSP14324 419 aaKnown RBP17.35■□□□□ 0.37
UBXN1-202ENST00000301935 CDK7P50613 346 aa17.35■□□□□ 0.37
UBXN1-202ENST00000301935 GJA9P57773 515 aa17.35■□□□□ 0.37
UBXN1-202ENST00000301935 GRIN2CQ14957 1233 aa17.35■□□□□ 0.37
UBXN1-202ENST00000301935 TEX2Q8IWB9 1127 aa17.35■□□□□ 0.37
UBXN1-202ENST00000301935 CMTR1Q8N1G2 835 aaKnown RBP17.35■□□□□ 0.37
UBXN1-202ENST00000301935 ALG1Q9BT22 464 aa17.35■□□□□ 0.37
UBXN1-202ENST00000301935 KATNBL1Q9H079 304 aa17.35■□□□□ 0.37
UBXN1-202ENST00000301935 DDIT3P35638 169 aa17.34■□□□□ 0.37
UBXN1-202ENST00000301935 SLC16A2P36021 539 aa17.34■□□□□ 0.37
UBXN1-202ENST00000301935 PPIGQ13427 754 aaKnown RBP eCLIP17.34■□□□□ 0.37
UBXN1-202ENST00000301935 C8orf76Q96K31 380 aa17.34■□□□□ 0.37
UBXN1-202ENST00000301935 VAT1LQ9HCJ6 419 aa17.34■□□□□ 0.37
UBXN1-202ENST00000301935 HOMER2Q9NSB8 354 aa17.34■□□□□ 0.37
UBXN1-202ENST00000301935 CHMP5Q9NZZ3 219 aa17.34■□□□□ 0.37
UBXN1-202ENST00000301935 PRR12Q9ULL5 1215 aa17.34■□□□□ 0.37
UBXN1-202ENST00000301935 BAZ2BQ9UIF8 2168 aaKnown RBP17.33■□□□□ 0.37
UBXN1-202ENST00000301935 H3BQV1 296 aa17.33■□□□□ 0.36
UBXN1-202ENST00000301935 ARVCFO00192 962 aa17.33■□□□□ 0.36
UBXN1-202ENST00000301935 NKX3-2P78367 333 aa17.33■□□□□ 0.36
UBXN1-202ENST00000301935 PKN1Q16512 942 aa17.33■□□□□ 0.36
UBXN1-202ENST00000301935 GNASQ5JWF2 1037 aa17.33■□□□□ 0.36
UBXN1-202ENST00000301935 GALNT17Q6IS24 598 aa17.33■□□□□ 0.36
UBXN1-202ENST00000301935 CCDC174Q6PII3 467 aa17.33■□□□□ 0.36
UBXN1-202ENST00000301935 RASGRP2Q7LDG7 609 aa17.33■□□□□ 0.36
UBXN1-202ENST00000301935 FAM126BQ8IXS8 530 aa17.33■□□□□ 0.36
UBXN1-202ENST00000301935 CCDC148Q8NFR7 591 aa17.33■□□□□ 0.36
UBXN1-202ENST00000301935 GLT8D2Q9H1C3 349 aa17.33■□□□□ 0.36
UBXN1-202ENST00000301935 ZNF576Q9H609 170 aa17.33■□□□□ 0.36
UBXN1-202ENST00000301935 ACAD9Q9H845 621 aa17.33■□□□□ 0.36
UBXN1-202ENST00000301935 LCTP09848 1927 aa17.33■□□□□ 0.36
UBXN1-202ENST00000301935 MYH6P13533 1939 aa17.33■□□□□ 0.36
UBXN1-202ENST00000301935 ZNF536O15090 1300 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 CTAGE5O15320 804 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 STX6O43752 255 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 SYT1P21579 422 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 CALML3P27482 149 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 SLC35G1Q2M3R5 365 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 RASIP1Q5U651 963 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 PPP1R18Q6NYC8 613 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 C16orf59Q7L2K0 433 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 FAM133AQ8N9E0 248 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 FBXO18Q8NFZ0 1043 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 VTI1AQ96AJ9 217 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 TIFAQ96CG3 184 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 PIGSQ96S52 555 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 AMNQ9BXJ7 453 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 PPP1R12CQ9BZL4 782 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 RANBP17Q9H2T7 1088 aaKnown RBP17.32■□□□□ 0.36
UBXN1-202ENST00000301935 A1CFQ9NQ94 594 aaKnown RBP17.32■□□□□ 0.36
UBXN1-202ENST00000301935 BARHL2Q9NY43 387 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 GBF1Q92538 1859 aa17.32■□□□□ 0.36
UBXN1-202ENST00000301935 TLR3O15455 904 aaKnown RBP17.31■□□□□ 0.36
UBXN1-202ENST00000301935 CSF2RAP15509 400 aa17.31■□□□□ 0.36
UBXN1-202ENST00000301935 CNTN2Q02246 1040 aa17.31■□□□□ 0.36
UBXN1-202ENST00000301935 SAFBQ15424 915 aaKnown RBP eCLIP17.31■□□□□ 0.36
UBXN1-202ENST00000301935 CDC37Q16543 378 aaPredicted RBP17.31■□□□□ 0.36
UBXN1-202ENST00000301935 TMEM240Q5SV17 173 aa17.31■□□□□ 0.36
UBXN1-202ENST00000301935 PSRC1Q6PGN9 363 aaPredicted RBP17.31■□□□□ 0.36
UBXN1-202ENST00000301935 FBXO11Q86XK2 927 aa17.31■□□□□ 0.36
UBXN1-202ENST00000301935 HOMER1Q86YM7 354 aa17.31■□□□□ 0.36
UBXN1-202ENST00000301935 TMEM199Q8N511 208 aa17.31■□□□□ 0.36
UBXN1-202ENST00000301935 USP38Q8NB14 1042 aa17.31■□□□□ 0.36
UBXN1-202ENST00000301935 PBX4Q9BYU1 374 aa17.31■□□□□ 0.36
UBXN1-202ENST00000301935 MAF1Q9H063 256 aa17.31■□□□□ 0.36
UBXN1-202ENST00000301935 CPVLQ9H3G5 476 aa17.31■□□□□ 0.36
UBXN1-202ENST00000301935 RNF146Q9NTX7 359 aa17.31■□□□□ 0.36
UBXN1-202ENST00000301935 MUC3AQ02505 3323 aa17.31■□□□□ 0.36
UBXN1-202ENST00000301935 ASTN1O14525 1302 aa17.3■□□□□ 0.36
UBXN1-202ENST00000301935 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.3■□□□□ 0.36
UBXN1-202ENST00000301935 QRICH1Q2TAL8 776 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms