RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 RBM28Q9NW13 759 aaKnown RBP12.02□□□□□ -0.49
ZNF558-201ENST00000301475 PACSIN2Q9UNF0 486 aaPredicted RBP12.02□□□□□ -0.49
ZNF558-201ENST00000301475 GMNCA6NCL1 334 aa12.02□□□□□ -0.49
ZNF558-201ENST00000301475 H0YGN5 161 aa12.02□□□□□ -0.49
ZNF558-201ENST00000301475 SCG2P13521 617 aa12.02□□□□□ -0.49
ZNF558-201ENST00000301475 SCTRP47872 440 aa12.02□□□□□ -0.49
ZNF558-201ENST00000301475 SATB1Q01826 763 aa12.02□□□□□ -0.49
ZNF558-201ENST00000301475 CDC37Q16543 378 aaPredicted RBP12.02□□□□□ -0.49
ZNF558-201ENST00000301475 TLDC1Q6P9B6 456 aa12.02□□□□□ -0.49
ZNF558-201ENST00000301475 RRAGAQ7L523 313 aa12.02□□□□□ -0.49
ZNF558-201ENST00000301475 TEX11Q8IYF3 940 aa12.02□□□□□ -0.49
ZNF558-201ENST00000301475 CCDC155Q8N6L0 562 aa12.02□□□□□ -0.49
ZNF558-201ENST00000301475 BAP1Q92560 729 aa12.02□□□□□ -0.49
ZNF558-201ENST00000301475 CNOT8Q9UFF9 292 aaKnown RBP12.02□□□□□ -0.49
ZNF558-201ENST00000301475 NFS1Q9Y697 457 aa12.02□□□□□ -0.49
ZNF558-201ENST00000301475 DLEC1Q9Y238 1755 aa12.01□□□□□ -0.49
ZNF558-201ENST00000301475 TMCO5BA8MYB1 307 aa12.01□□□□□ -0.49
ZNF558-201ENST00000301475 ATP2C2O75185 946 aa12.01□□□□□ -0.49
ZNF558-201ENST00000301475 ERCC3P19447 782 aa12.01□□□□□ -0.49
ZNF558-201ENST00000301475 HSD17B3P37058 310 aa12.01□□□□□ -0.49
ZNF558-201ENST00000301475 ERVK-9P63128 1117 aa12.01□□□□□ -0.49
ZNF558-201ENST00000301475 PDE4DQ08499 809 aa12.01□□□□□ -0.49
ZNF558-201ENST00000301475 HLFQ16534 295 aa12.01□□□□□ -0.49
ZNF558-201ENST00000301475 SEC16BQ96JE7 1060 aa12.01□□□□□ -0.49
ZNF558-201ENST00000301475 PLCB1Q9NQ66 1216 aa12.01□□□□□ -0.49
ZNF558-201ENST00000301475 PALMO75781 387 aa12.01□□□□□ -0.49
ZNF558-201ENST00000301475 FAM114A1Q8IWE2 563 aa12.01□□□□□ -0.49
ZNF558-201ENST00000301475 MMRN2Q9H8L6 949 aa12.01□□□□□ -0.49
ZNF558-201ENST00000301475 SLC24A3Q9HC58 644 aa12.01□□□□□ -0.49
ZNF558-201ENST00000301475 LRP5O75197 1615 aa12.01□□□□□ -0.49
ZNF558-201ENST00000301475 BICDL2A1A5D9 508 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 DCDC2CA8MYV0 355 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 MYBP10242 640 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 CLNS1AP54105 237 aaKnown RBP12□□□□□ -0.49
ZNF558-201ENST00000301475 EVX2Q03828 476 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 ZNF844Q08AG5 666 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 HGSNATQ68CP4 663 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 NLRP10Q86W26 655 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 KIAA0895Q8NCT3 520 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 ZCRB1Q8TBF4 217 aaKnown RBP12□□□□□ -0.49
ZNF558-201ENST00000301475 MAGEC3Q8TD91 643 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 CARD10Q9BWT7 1032 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 TRIM9Q9C026 710 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 NDST4Q9H3R1 872 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 SEMA6BQ9H3T3 888 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 ANAPC4Q9UJX5 808 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 FLT1P17948 1338 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 C5orf60A6NFR6 353 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 GCOM1H8Y6P7 765 aaPredicted RBP12□□□□□ -0.49
ZNF558-201ENST00000301475 NMT2O60551 498 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 MYZAPP0CAP1 466 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 UBA7P41226 1012 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 XRCC4Q13426 336 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 VWA3BQ502W6 1294 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 DTHD1Q6ZMT9 781 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 ARFGAP2Q8N6H7 521 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 ATP6V0A4Q9HBG4 840 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 TNS2Q63HR2 1409 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 IRS4O14654 1257 aaPredicted RBP12□□□□□ -0.49
ZNF558-201ENST00000301475 RTN2O75298 545 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 MYL1P05976 194 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 EZRP15311 586 aaKnown RBP12□□□□□ -0.49
ZNF558-201ENST00000301475 PLCG1P19174 1290 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 HLTFQ14527 1009 aaKnown RBP eCLIP12□□□□□ -0.49
ZNF558-201ENST00000301475 CRYMQ14894 314 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 PFKFB3Q16875 520 aaPredicted RBP12□□□□□ -0.49
ZNF558-201ENST00000301475 ACCSLQ4AC99 568 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 KLHL7Q8IXQ5 586 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 RAPGEF5Q92565 580 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 GPKOWQ92917 476 aaPredicted RBP eCLIP12□□□□□ -0.49
ZNF558-201ENST00000301475 NEUROG2Q9H2A3 272 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 RNF14Q9UBS8 474 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 TSKSQ9UJT2 592 aa12□□□□□ -0.49
ZNF558-201ENST00000301475 MYH7BA7E2Y1 1941 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 GOLGA6L10A6NI86 522 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 PPP1R12BO60237 982 aaPredicted RBP11.99□□□□□ -0.49
ZNF558-201ENST00000301475 NEBLO76041 1014 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 LRIG3Q6UXM1 1119 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 KIF6Q6ZMV9 814 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 DDX42Q86XP3 938 aaKnown RBP eCLIP11.99□□□□□ -0.49
ZNF558-201ENST00000301475 RNF10Q8N5U6 811 aaKnown RBP11.99□□□□□ -0.49
ZNF558-201ENST00000301475 TATDN2Q93075 761 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 TAF1DQ9H5J8 278 aaPredicted RBP11.99□□□□□ -0.49
ZNF558-201ENST00000301475 LRRC4CQ9HCJ2 640 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 MGRN1O60291 552 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 DDAH1O94760 285 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 IL2RBP14784 551 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 KLRC1P26715 233 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 BCAMP50895 628 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 ASIC1P78348 528 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 LACTB2Q53H82 288 aaPredicted RBP11.99□□□□□ -0.49
ZNF558-201ENST00000301475 TDRD12Q587J7 1177 aaKnown RBP11.99□□□□□ -0.49
ZNF558-201ENST00000301475 PDXDC1Q6P996 788 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 CACNA2D3Q8IZS8 1091 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 C3orf20Q8ND61 904 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 CCT6BQ92526 530 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 IQCDQ96DY2 449 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 CCSER1Q9C0I3 900 aa11.99□□□□□ -0.49
ZNF558-201ENST00000301475 MYH4Q9Y623 1939 aa11.98□□□□□ -0.49
ZNF558-201ENST00000301475 GRID2IPA4D2P6 1211 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms