RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 CACNB3P54284 484 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 ZNF543Q08ER8 600 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 GPS2Q13227 327 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 VWA3BQ502W6 1294 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 KRT79Q5XKE5 535 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 TEX2Q8IWB9 1127 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 RAD54LQ92698 747 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 DRC1Q96MC2 740 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 NDST4Q9H3R1 872 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 L1RE1Q9UN81 338 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 KRT86O43790 486 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 CACNB1Q02641 598 aaPredicted RBP14.34□□□□□ -0.11
HIF3A-204ENST00000300862 NFIAQ12857 509 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 ZFPM1Q8IX07 1006 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 RETREG2Q8NC44 543 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 HAS1Q92839 578 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 CCDC42Q96M95 316 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 ERGIC2Q96RQ1 377 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 DDX25Q9UHL0 483 aaKnown RBP14.34□□□□□ -0.11
HIF3A-204ENST00000300862 ADAM21Q9UKJ8 722 aa14.34□□□□□ -0.11
HIF3A-204ENST00000300862 IGKV6D-41A0A0C4DH26 115 aa14.33□□□□□ -0.11
HIF3A-204ENST00000300862 PNMA6FA0A0J9YX94 578 aa14.33□□□□□ -0.11
HIF3A-204ENST00000300862 PPEF1O14829 653 aaPredicted RBP14.33□□□□□ -0.11
HIF3A-204ENST00000300862 SNHG28P0DPA3 235 aa14.33□□□□□ -0.11
HIF3A-204ENST00000300862 CHRM1P11229 460 aaPredicted RBP14.33□□□□□ -0.11
HIF3A-204ENST00000300862 ADRA2BP18089 450 aa14.33□□□□□ -0.11
HIF3A-204ENST00000300862 SHMT1P34896 483 aa14.33□□□□□ -0.11
HIF3A-204ENST00000300862 HDXQ7Z353 690 aa14.33□□□□□ -0.11
HIF3A-204ENST00000300862 SEPT12Q8IYM1 358 aa14.33□□□□□ -0.11
HIF3A-204ENST00000300862 HNRNPLLQ8WVV9 542 aaKnown RBP14.33□□□□□ -0.11
HIF3A-204ENST00000300862 EXOC4Q96A65 974 aa14.33□□□□□ -0.11
HIF3A-204ENST00000300862 FGFBP2Q9BYJ0 223 aa14.33□□□□□ -0.11
HIF3A-204ENST00000300862 KANSL2Q9H9L4 492 aa14.33□□□□□ -0.11
HIF3A-204ENST00000300862 ARHGAP20Q9P2F6 1191 aa14.33□□□□□ -0.11
HIF3A-204ENST00000300862 STK17AQ9UEE5 414 aa14.33□□□□□ -0.11
HIF3A-204ENST00000300862 PCDHAC2Q9Y5I4 1007 aa14.33□□□□□ -0.11
HIF3A-204ENST00000300862 EIF3CLB5ME19 914 aaKnown RBP14.33□□□□□ -0.12
HIF3A-204ENST00000300862 USP17L15C9J2P7 530 aa14.33□□□□□ -0.12
HIF3A-204ENST00000300862 USP17L13C9JLJ4 530 aa14.33□□□□□ -0.12
HIF3A-204ENST00000300862 USP17L11C9JVI0 530 aa14.33□□□□□ -0.12
HIF3A-204ENST00000300862 USP17L18D6R9N7 530 aa14.33□□□□□ -0.12
HIF3A-204ENST00000300862 USP17L22D6RA61 530 aa14.33□□□□□ -0.12
HIF3A-204ENST00000300862 USP17L17D6RBQ6 530 aa14.33□□□□□ -0.12
HIF3A-204ENST00000300862 USP17L19D6RCP7 530 aa14.33□□□□□ -0.12
HIF3A-204ENST00000300862 USP17L20D6RJB6 530 aa14.33□□□□□ -0.12
HIF3A-204ENST00000300862 POTEB2H3BUK9 544 aa14.33□□□□□ -0.12
HIF3A-204ENST00000300862 POLRMTO00411 1230 aaKnown RBP14.33□□□□□ -0.12
HIF3A-204ENST00000300862 USP17L24Q0WX57 530 aa14.33□□□□□ -0.12
HIF3A-204ENST00000300862 SEMA3FQ13275 785 aa14.33□□□□□ -0.12
HIF3A-204ENST00000300862 USP17L6PQ6QN14 398 aa14.33□□□□□ -0.12
HIF3A-204ENST00000300862 GDAP1L1Q96MZ0 367 aa14.33□□□□□ -0.12
HIF3A-204ENST00000300862 EIF3CQ99613 913 aaKnown RBP14.33□□□□□ -0.12
HIF3A-204ENST00000300862 JADE2Q9NQC1 790 aa14.33□□□□□ -0.12
HIF3A-204ENST00000300862 SIK3Q9Y2K2 1263 aa14.33□□□□□ -0.12
HIF3A-204ENST00000300862 PDE2AO00408 941 aaPredicted RBP14.32□□□□□ -0.12
HIF3A-204ENST00000300862 ERLIN1O75477 346 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 HOXA10P31260 410 aaPredicted RBP14.32□□□□□ -0.12
HIF3A-204ENST00000300862 LMAN1P49257 510 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 TCP10Q12799 353 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 RRAGAQ7L523 313 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 TANGO6Q9C0B7 1094 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 ZC3H12CQ9C0D7 883 aaKnown RBP14.32□□□□□ -0.12
HIF3A-204ENST00000300862 MLXIPQ9HAP2 919 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 RIC8AQ9NPQ8 531 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 KCNQ5Q9NR82 932 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 PSD3Q9NYI0 1048 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 NPHP3-ACAD11A0A0J9YXS1 232 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 PVALEFA0A1B0GWK0 134 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 TRIM66O15016 1216 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 PHACTR2O75167 634 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 SNAP25P60880 206 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 CASP8Q14790 479 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 PAPD7Q5XG87 772 aaKnown RBP14.32□□□□□ -0.12
HIF3A-204ENST00000300862 CDC42EP5Q6NZY7 148 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 CCDC170Q8IYT3 715 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 ANKRD13CQ8N6S4 541 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 PSMB7Q99436 277 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 RAB34Q9BZG1 259 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 PSTPIP2Q9H939 334 aa14.32□□□□□ -0.12
HIF3A-204ENST00000300862 EIF4A3P38919 411 aaKnown RBP14.31□□□□□ -0.12
HIF3A-204ENST00000300862 KIF5AQ12840 1032 aa14.31□□□□□ -0.12
HIF3A-204ENST00000300862 SPA17Q15506 151 aa14.31□□□□□ -0.12
HIF3A-204ENST00000300862 MEX3CQ5U5Q3 659 aaKnown RBP14.31□□□□□ -0.12
HIF3A-204ENST00000300862 LRRC55Q6ZSA7 311 aa14.31□□□□□ -0.12
HIF3A-204ENST00000300862 NELFCDQ8IXH7 590 aa14.31□□□□□ -0.12
HIF3A-204ENST00000300862 GUF1Q8N442 669 aaKnown RBP14.31□□□□□ -0.12
HIF3A-204ENST00000300862 GOLGA5Q8TBA6 731 aa14.31□□□□□ -0.12
HIF3A-204ENST00000300862 CAGE1Q8TC20 777 aa14.31□□□□□ -0.12
HIF3A-204ENST00000300862 CRAMP1Q96RY5 1269 aa14.31□□□□□ -0.12
HIF3A-204ENST00000300862 VPS18Q9P253 973 aa14.31□□□□□ -0.12
HIF3A-204ENST00000300862 CAPN6Q9Y6Q1 641 aa14.31□□□□□ -0.12
HIF3A-204ENST00000300862 LY75O60449 1722 aa14.31□□□□□ -0.12
HIF3A-204ENST00000300862 LRRC53A6NM62 1247 aa14.31□□□□□ -0.12
HIF3A-204ENST00000300862 LRRIQ3A6PVS8 624 aaPredicted RBP14.31□□□□□ -0.12
HIF3A-204ENST00000300862 E9PMD0 336 aa14.31□□□□□ -0.12
HIF3A-204ENST00000300862 MYO1CO00159 1063 aa14.31□□□□□ -0.12
HIF3A-204ENST00000300862 PPP1R2P41236 205 aa14.31□□□□□ -0.12
HIF3A-204ENST00000300862 MRPS25P82663 173 aaKnown RBP14.31□□□□□ -0.12
HIF3A-204ENST00000300862 APBA1Q02410 837 aa14.31□□□□□ -0.12
HIF3A-204ENST00000300862 PDIA5Q14554 519 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms