RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 NMRK2Q9NPI5 230 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 HOMER2Q9NSB8 354 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 KBTBD4Q9NVX7 518 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 STK24Q9Y6E0 443 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 AMPD3Q01432 767 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 CT47A1Q5JQC4 288 aaPredicted RBP17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 LENG9Q96B70 501 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 TRERF1Q96PN7 1200 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 MTRQ99707 1265 aa17.67■□□□□ 0.42
HERPUD1-201ENST00000300302 KDM3AQ9Y4C1 1321 aa17.66■□□□□ 0.42
HERPUD1-201ENST00000300302 BMP6P22004 513 aa17.66■□□□□ 0.42
HERPUD1-201ENST00000300302 SEMA3FQ13275 785 aa17.66■□□□□ 0.42
HERPUD1-201ENST00000300302 CUL4BQ13620 913 aa17.66■□□□□ 0.42
HERPUD1-201ENST00000300302 NT5C3AQ9H0P0 336 aa17.66■□□□□ 0.42
HERPUD1-201ENST00000300302 BLZF1Q9H2G9 400 aa17.66■□□□□ 0.42
HERPUD1-201ENST00000300302 RBBP6Q7Z6E9 1792 aaKnown RBP17.66■□□□□ 0.42
HERPUD1-201ENST00000300302 SPDYE5A6NIY4 337 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 ATP2A1O14983 1001 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 CASP1P29466 404 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 SETQ01105 290 aaPredicted RBP17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 MYL5Q02045 173 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 FMR1Q06787 632 aaKnown RBP eCLIP17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 MUM1L1Q5H9M0 696 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 REPS2Q8NFH8 660 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 ERMNQ8TAM6 284 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 OTUD5Q96G74 571 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 RLFQ13129 1914 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 IGLV3-22A0A075B6J6 115 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 TRAF5O00463 557 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 CXCL11O14625 94 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 MSH4O15457 936 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 RPN1P04843 607 aaKnown RBP17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 GRB10Q13322 594 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 CEP55Q53EZ4 464 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 HAUS3Q68CZ6 603 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 SNRNP48Q6IEG0 339 aaKnown RBP17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 SARM1Q6SZW1 724 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 MOB2Q70IA6 237 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 PROCA1Q8NCQ7 364 aaPredicted RBP17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 GJA10Q969M2 543 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 WNK4Q96J92 1243 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 TRIM5Q9C035 493 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 RNF146Q9NTX7 359 aa17.65■□□□□ 0.42
HERPUD1-201ENST00000300302 AP5Z1O43299 807 aa17.64■□□□□ 0.41
HERPUD1-201ENST00000300302 TKFCQ3LXA3 575 aa17.64■□□□□ 0.41
HERPUD1-201ENST00000300302 RNF207Q6ZRF8 634 aa17.64■□□□□ 0.41
HERPUD1-201ENST00000300302 SV2BQ7L1I2 683 aa17.64■□□□□ 0.41
HERPUD1-201ENST00000300302 CNKSR2Q8WXI2 1034 aa17.64■□□□□ 0.41
HERPUD1-201ENST00000300302 CCDC47Q96A33 483 aaKnown RBP17.64■□□□□ 0.41
HERPUD1-201ENST00000300302 TEX13BQ9BXU2 312 aa17.64■□□□□ 0.41
HERPUD1-201ENST00000300302 LRRC27Q9C0I9 530 aa17.64■□□□□ 0.41
HERPUD1-201ENST00000300302 MAF1Q9H063 256 aa17.64■□□□□ 0.41
HERPUD1-201ENST00000300302 PTPRFP10586 1907 aa17.64■□□□□ 0.41
HERPUD1-201ENST00000300302 RPTORQ8N122 1335 aa17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 A0A0G2JLL6 359 aaPredicted RBP17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 IRF6O14896 467 aa17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 ERCC5P28715 1186 aaPredicted RBP17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 CCT6AP40227 531 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 RPS6P62753 249 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 TMEM119Q4V9L6 283 aa17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 HYIQ5T013 277 aa17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 PRRT2Q7Z6L0 340 aaPredicted RBP17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 PLA2G4DQ86XP0 818 aa17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 CYP2W1Q8TAV3 490 aa17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 SYTL5Q8TDW5 730 aaPredicted RBP17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 CLMNQ96JQ2 1002 aa17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 PNMA5Q96PV4 448 aa17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 ZNF214Q9UL59 606 aaPredicted RBP17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 COL11A1P12107 1806 aaPredicted RBP17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 SPDYE16A6NNV3 312 aaPredicted RBP17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 PTMAP06454 111 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 UBXN2AP68543 259 aa17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 PPIL2Q13356 520 aa17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 KCNB1Q14721 858 aa17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 TMEM132BQ14DG7 1078 aa17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 NCAPHQ15003 741 aa17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 HS1BP3Q53T59 392 aa17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 GADL1Q6ZQY3 521 aa17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 LARP4BQ92615 738 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 C7orf25Q9BPX7 421 aa17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 GTPBP4Q9BZE4 634 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-201ENST00000300302 UNCXA6NJT0 531 aa17.62■□□□□ 0.41
HERPUD1-201ENST00000300302 HOXA7P31268 230 aaPredicted RBP17.62■□□□□ 0.41
HERPUD1-201ENST00000300302 SPIRE1Q08AE8 756 aa17.62■□□□□ 0.41
HERPUD1-201ENST00000300302 TREML2Q5T2D2 321 aa17.62■□□□□ 0.41
HERPUD1-201ENST00000300302 ZNF658Q5TYW1 1059 aaPredicted RBP17.62■□□□□ 0.41
HERPUD1-201ENST00000300302 NSMFQ6X4W1 530 aa17.62■□□□□ 0.41
HERPUD1-201ENST00000300302 MB21D1Q8N884 522 aa17.62■□□□□ 0.41
HERPUD1-201ENST00000300302 LRRC15Q8TF66 581 aa17.62■□□□□ 0.41
HERPUD1-201ENST00000300302 RAD54LQ92698 747 aa17.62■□□□□ 0.41
HERPUD1-201ENST00000300302 UIMC1Q96RL1 719 aa17.62■□□□□ 0.41
HERPUD1-201ENST00000300302 ZNF408Q9H9D4 720 aa17.62■□□□□ 0.41
HERPUD1-201ENST00000300302 COL20A1Q9P218 1284 aa17.62■□□□□ 0.41
HERPUD1-201ENST00000300302 KCNH4Q9UQ05 1017 aa17.62■□□□□ 0.41
HERPUD1-201ENST00000300302 RIPK3Q9Y572 518 aa17.62■□□□□ 0.41
HERPUD1-201ENST00000300302 LOC285556D6RIA3 1793 aa17.62■□□□□ 0.41
HERPUD1-201ENST00000300302 FRMPD4Q14CM0 1322 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 MEIS1O00470 390 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 STAT3P40763 770 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 ZNF75DP51815 510 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms