RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 HOMER2Q9NSB8 354 aa11.81□□□□□ -0.52
COPS2-201ENST00000299259 SYNRGQ9UMZ2 1314 aa11.8□□□□□ -0.52
COPS2-201ENST00000299259 LCTP09848 1927 aa11.8□□□□□ -0.52
COPS2-201ENST00000299259 GOLGA6L6A8MZA4 724 aa11.8□□□□□ -0.52
COPS2-201ENST00000299259 SLC26A4O43511 780 aa11.8□□□□□ -0.52
COPS2-201ENST00000299259 ERCC5P28715 1186 aaPredicted RBP11.8□□□□□ -0.52
COPS2-201ENST00000299259 CDC25BP30305 580 aa11.8□□□□□ -0.52
COPS2-201ENST00000299259 CT47A1Q5JQC4 288 aaPredicted RBP11.8□□□□□ -0.52
COPS2-201ENST00000299259 HAUS3Q68CZ6 603 aa11.8□□□□□ -0.52
COPS2-201ENST00000299259 MRFAP1L1Q96HT8 127 aa11.8□□□□□ -0.52
COPS2-201ENST00000299259 RABGAP1Q9Y3P9 1069 aa11.8□□□□□ -0.52
COPS2-201ENST00000299259 KIAA1217Q5T5P2 1943 aa11.8□□□□□ -0.52
COPS2-201ENST00000299259 MYPNQ86TC9 1320 aa11.8□□□□□ -0.52
COPS2-201ENST00000299259 RPTORQ8N122 1335 aa11.8□□□□□ -0.52
COPS2-201ENST00000299259 IGLV3-22A0A075B6J6 115 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 MSH4O15457 936 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 CCT6AP40227 531 aaKnown RBP11.79□□□□□ -0.52
COPS2-201ENST00000299259 OAZ1P54368 228 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 UBXN2AP68543 259 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 SETQ01105 290 aaPredicted RBP11.79□□□□□ -0.52
COPS2-201ENST00000299259 AMPD3Q01432 767 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 FMR1Q06787 632 aaKnown RBP eCLIP11.79□□□□□ -0.52
COPS2-201ENST00000299259 KCNB1Q14721 858 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 MUM1L1Q5H9M0 696 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 SH3D19Q5HYK7 790 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 ZNF658Q5TYW1 1059 aaPredicted RBP11.79□□□□□ -0.52
COPS2-201ENST00000299259 TRMT44Q8IYL2 757 aaKnown RBP11.79□□□□□ -0.52
COPS2-201ENST00000299259 SMYD4Q8IYR2 804 aaPredicted RBP11.79□□□□□ -0.52
COPS2-201ENST00000299259 SPC24Q8NBT2 197 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 LARP4BQ92615 738 aaKnown RBP11.79□□□□□ -0.52
COPS2-201ENST00000299259 WNK4Q96J92 1243 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 UIMC1Q96RL1 719 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 NUDT12Q9BQG2 462 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 TRIM9Q9C026 710 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 NT5C3AQ9H0P0 336 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 DSG3P32926 999 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 ASIC1P78348 528 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 SPIRE1Q08AE8 756 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 SEMA3FQ13275 785 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 EAPPQ56P03 285 aaPredicted RBP11.79□□□□□ -0.52
COPS2-201ENST00000299259 HYIQ5T013 277 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 CATSPERGQ6ZRH7 1159 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 SAMD3Q8N6K7 520 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 REPS2Q8NFH8 660 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 ERMNQ8TAM6 284 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 CYP2W1Q8TAV3 490 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 ENOX1Q8TC92 643 aaKnown RBP11.79□□□□□ -0.52
COPS2-201ENST00000299259 RAD54LQ92698 747 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 CCDC47Q96A33 483 aaKnown RBP11.79□□□□□ -0.52
COPS2-201ENST00000299259 HSD3B7Q9H2F3 369 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 TAF1DQ9H5J8 278 aaPredicted RBP11.79□□□□□ -0.52
COPS2-201ENST00000299259 BLOC1S4Q9NUP1 217 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 MAP3K20Q9NYL2 800 aaKnown RBP11.79□□□□□ -0.52
COPS2-201ENST00000299259 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.79□□□□□ -0.52
COPS2-201ENST00000299259 COL20A1Q9P218 1284 aa11.79□□□□□ -0.52
COPS2-201ENST00000299259 ESPNB1AK53 854 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 CD44P16070 742 aaKnown RBP11.78□□□□□ -0.52
COPS2-201ENST00000299259 STAT3P40763 770 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 TTLL12Q14166 644 aaPredicted RBP11.78□□□□□ -0.52
COPS2-201ENST00000299259 COG2Q14746 738 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 CEP55Q53EZ4 464 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 NCAPH2Q6IBW4 605 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 SNRNP48Q6IEG0 339 aaKnown RBP11.78□□□□□ -0.52
COPS2-201ENST00000299259 KLHL10Q6JEL2 608 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 SV2BQ7L1I2 683 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 ZSCAN30Q86W11 494 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 DRC7Q8IY82 874 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 ANKRD13AQ8IZ07 590 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 TRERF1Q96PN7 1200 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 C7orf25Q9BPX7 421 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 RNF146Q9NTX7 359 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 VAV3Q9UKW4 847 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 ADAMTS5Q9UNA0 930 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 NFE2L3Q9Y4A8 694 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 FRMPD4Q14CM0 1322 aa11.78□□□□□ -0.52
COPS2-201ENST00000299259 SPDYE16A6NNV3 312 aaPredicted RBP11.77□□□□□ -0.52
COPS2-201ENST00000299259 PPP1R3GB7ZBB8 358 aa11.77□□□□□ -0.52
COPS2-201ENST00000299259 KLRC4O43908 158 aa11.77□□□□□ -0.52
COPS2-201ENST00000299259 RHOBTB3O94955 611 aa11.77□□□□□ -0.52
COPS2-201ENST00000299259 DHX8Q14562 1220 aaKnown RBP11.77□□□□□ -0.52
COPS2-201ENST00000299259 MCM6Q14566 821 aa11.77□□□□□ -0.52
COPS2-201ENST00000299259 KMT5BQ4FZB7 885 aa11.77□□□□□ -0.52
COPS2-201ENST00000299259 SLC30A10Q6XR72 485 aa11.77□□□□□ -0.52
COPS2-201ENST00000299259 SYTL5Q8TDW5 730 aaPredicted RBP11.77□□□□□ -0.52
COPS2-201ENST00000299259 CNKSR2Q8WXI2 1034 aa11.77□□□□□ -0.52
COPS2-201ENST00000299259 OTUD5Q96G74 571 aa11.77□□□□□ -0.52
COPS2-201ENST00000299259 ELP3Q9H9T3 547 aa11.77□□□□□ -0.52
COPS2-201ENST00000299259 EXOC1Q9NV70 894 aa11.77□□□□□ -0.52
COPS2-201ENST00000299259 FANCLQ9NW38 375 aa11.77□□□□□ -0.52
COPS2-201ENST00000299259 ZNF214Q9UL59 606 aaPredicted RBP11.77□□□□□ -0.52
COPS2-201ENST00000299259 CTNND2Q9UQB3 1225 aa11.77□□□□□ -0.52
COPS2-201ENST00000299259 STK24Q9Y6E0 443 aa11.77□□□□□ -0.52
COPS2-201ENST00000299259 WDR81Q562E7 1941 aa11.77□□□□□ -0.52
COPS2-201ENST00000299259 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
COPS2-201ENST00000299259 POTECB2RU33 542 aa11.77□□□□□ -0.53
COPS2-201ENST00000299259 ATP1A3P13637 1013 aa11.77□□□□□ -0.53
COPS2-201ENST00000299259 RPS6P62753 249 aaKnown RBP11.77□□□□□ -0.53
COPS2-201ENST00000299259 PPATQ06203 517 aa11.77□□□□□ -0.53
COPS2-201ENST00000299259 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
COPS2-201ENST00000299259 RNF207Q6ZRF8 634 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms