RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 EHD4Q9H223 541 aa22.03■■□□□ 1.12
NFIL3-201ENST00000297689 ATF5Q9Y2D1 282 aaPredicted RBP22.03■■□□□ 1.12
NFIL3-201ENST00000297689 EIF3CLB5ME19 914 aaKnown RBP22.03■■□□□ 1.12
NFIL3-201ENST00000297689 PES1O00541 588 aaKnown RBP22.03■■□□□ 1.12
NFIL3-201ENST00000297689 MTIF2P46199 727 aaKnown RBP22.03■■□□□ 1.12
NFIL3-201ENST00000297689 NFIAQ12857 509 aa22.03■■□□□ 1.12
NFIL3-201ENST00000297689 DACT2Q5SW24 774 aa22.03■■□□□ 1.12
NFIL3-201ENST00000297689 TRAPPC11Q7Z392 1133 aa22.03■■□□□ 1.12
NFIL3-201ENST00000297689 EIF3CQ99613 913 aaKnown RBP22.03■■□□□ 1.12
NFIL3-201ENST00000297689 SIK3Q9Y2K2 1263 aa22.03■■□□□ 1.12
NFIL3-201ENST00000297689 MYH7BA7E2Y1 1941 aa22.03■■□□□ 1.12
NFIL3-201ENST00000297689 POTEB2H3BUK9 544 aa22.02■■□□□ 1.12
NFIL3-201ENST00000297689 MAP2K7O14733 419 aa22.02■■□□□ 1.12
NFIL3-201ENST00000297689 ZBTB5O15062 677 aa22.02■■□□□ 1.12
NFIL3-201ENST00000297689 ECE2O60344 883 aa22.02■■□□□ 1.12
NFIL3-201ENST00000297689 TRIM21P19474 475 aaKnown RBP22.02■■□□□ 1.12
NFIL3-201ENST00000297689 KRT83P78385 493 aa22.02■■□□□ 1.12
NFIL3-201ENST00000297689 ECM1Q16610 540 aa22.02■■□□□ 1.12
NFIL3-201ENST00000297689 TSR1Q2NL82 804 aaKnown RBP22.02■■□□□ 1.12
NFIL3-201ENST00000297689 HYIQ5T013 277 aa22.02■■□□□ 1.12
NFIL3-201ENST00000297689 ZFPM1Q8IX07 1006 aa22.02■■□□□ 1.12
NFIL3-201ENST00000297689 MYO6Q9UM54 1294 aa22.02■■□□□ 1.12
NFIL3-201ENST00000297689 MYH4Q9Y623 1939 aa22.02■■□□□ 1.12
NFIL3-201ENST00000297689 SLURP2P0DP57 97 aa22.02■■□□□ 1.11
NFIL3-201ENST00000297689 PSMD2Q13200 908 aa22.02■■□□□ 1.11
NFIL3-201ENST00000297689 UBE2SQ16763 222 aa22.02■■□□□ 1.11
NFIL3-201ENST00000297689 LONRF2Q1L5Z9 754 aa22.02■■□□□ 1.11
NFIL3-201ENST00000297689 PURBQ96QR8 312 aaKnown RBP22.02■■□□□ 1.11
NFIL3-201ENST00000297689 DNAJC18Q9H819 358 aa22.02■■□□□ 1.11
NFIL3-201ENST00000297689 GUCA1BQ9UMX6 200 aa22.02■■□□□ 1.11
NFIL3-201ENST00000297689 RCCD1A6NED2 376 aa22.01■■□□□ 1.11
NFIL3-201ENST00000297689 STRIP1Q5VSL9 837 aa22.01■■□□□ 1.11
NFIL3-201ENST00000297689 PAPD7Q5XG87 772 aaKnown RBP22.01■■□□□ 1.11
NFIL3-201ENST00000297689 KRT79Q5XKE5 535 aa22.01■■□□□ 1.11
NFIL3-201ENST00000297689 LRRC55Q6ZSA7 311 aa22.01■■□□□ 1.11
NFIL3-201ENST00000297689 SNX29Q8TEQ0 813 aa22.01■■□□□ 1.11
NFIL3-201ENST00000297689 CUL5Q93034 780 aa22.01■■□□□ 1.11
NFIL3-201ENST00000297689 DNAJC19Q96DA6 116 aa22.01■■□□□ 1.11
NFIL3-201ENST00000297689 ZDHHC15Q96MV8 337 aa22.01■■□□□ 1.11
NFIL3-201ENST00000297689 PNKPQ96T60 521 aa22.01■■□□□ 1.11
NFIL3-201ENST00000297689 NHEJ1Q9H9Q4 299 aaPredicted RBP22.01■■□□□ 1.11
NFIL3-201ENST00000297689 SIPA1L1O43166 1804 aa22.01■■□□□ 1.11
NFIL3-201ENST00000297689 USP17L10C9JJH3 530 aa22■■□□□ 1.11
NFIL3-201ENST00000297689 GCFC2P16383 781 aaKnown RBP22■■□□□ 1.11
NFIL3-201ENST00000297689 CYLC1P35663 651 aaPredicted RBP22■■□□□ 1.11
NFIL3-201ENST00000297689 TNNI2P48788 182 aa22■■□□□ 1.11
NFIL3-201ENST00000297689 MRPL12P52815 198 aaKnown RBP22■■□□□ 1.11
NFIL3-201ENST00000297689 FKBP1AP62942 108 aaKnown RBP22■■□□□ 1.11
NFIL3-201ENST00000297689 LRRC63Q05C16 580 aa22■■□□□ 1.11
NFIL3-201ENST00000297689 VWA3BQ502W6 1294 aa22■■□□□ 1.11
NFIL3-201ENST00000297689 BEND6Q5SZJ8 279 aaPredicted RBP22■■□□□ 1.11
NFIL3-201ENST00000297689 KIAA0825Q8IV33 1275 aa22■■□□□ 1.11
NFIL3-201ENST00000297689 DDX12PQ92771 950 aa22■■□□□ 1.11
NFIL3-201ENST00000297689 CNKSR1Q969H4 720 aa22■■□□□ 1.11
NFIL3-201ENST00000297689 MKL1Q969V6 931 aa22■■□□□ 1.11
NFIL3-201ENST00000297689 CCDC17Q96LX7 622 aa22■■□□□ 1.11
NFIL3-201ENST00000297689 LACRTQ9GZZ8 138 aa22■■□□□ 1.11
NFIL3-201ENST00000297689 PLAGL2Q9UPG8 496 aa22■■□□□ 1.11
NFIL3-201ENST00000297689 DYMQ7RTS9 669 aa22■■□□□ 1.11
NFIL3-201ENST00000297689 LRRC27Q9C0I9 530 aa22■■□□□ 1.11
NFIL3-201ENST00000297689 CTAGE15A4D2H0 777 aa21.99■■□□□ 1.11
NFIL3-201ENST00000297689 CTAGE8P0CG41 777 aa21.99■■□□□ 1.11
NFIL3-201ENST00000297689 SLC16A2P36021 539 aa21.99■■□□□ 1.11
NFIL3-201ENST00000297689 CTAGE6Q86UF2 777 aa21.99■■□□□ 1.11
NFIL3-201ENST00000297689 CTAGE4Q8IX94 777 aa21.99■■□□□ 1.11
NFIL3-201ENST00000297689 MSL3Q8N5Y2 521 aaKnown RBP21.99■■□□□ 1.11
NFIL3-201ENST00000297689 CDK5RAP3Q96JB5 506 aa21.99■■□□□ 1.11
NFIL3-201ENST00000297689 MRIQ9BWK5 157 aa21.99■■□□□ 1.11
NFIL3-201ENST00000297689 NDST4Q9H3R1 872 aa21.99■■□□□ 1.11
NFIL3-201ENST00000297689 DDX25Q9UHL0 483 aaKnown RBP21.99■■□□□ 1.11
NFIL3-201ENST00000297689 ZHX1Q9UKY1 873 aaPredicted RBP21.99■■□□□ 1.11
NFIL3-201ENST00000297689 TFR2Q9UP52 801 aa21.99■■□□□ 1.11
NFIL3-201ENST00000297689 ARFGEF1Q9Y6D6 1849 aa21.99■■□□□ 1.11
NFIL3-201ENST00000297689 SEPT2Q15019 361 aa21.99■■□□□ 1.11
NFIL3-201ENST00000297689 AOC3Q16853 763 aa21.99■■□□□ 1.11
NFIL3-201ENST00000297689 ZCWPW2Q504Y3 356 aa21.99■■□□□ 1.11
NFIL3-201ENST00000297689 CCDC122Q5T0U0 273 aa21.99■■□□□ 1.11
NFIL3-201ENST00000297689 ZNHIT6Q9NWK9 470 aaKnown RBP21.99■■□□□ 1.11
NFIL3-201ENST00000297689 ZNF263O14978 683 aa21.98■■□□□ 1.11
NFIL3-201ENST00000297689 CACNB3P54284 484 aa21.98■■□□□ 1.11
NFIL3-201ENST00000297689 MAN2A1Q16706 1144 aa21.98■■□□□ 1.11
NFIL3-201ENST00000297689 FKBP15Q5T1M5 1219 aa21.98■■□□□ 1.11
NFIL3-201ENST00000297689 MBOAT7Q96N66 472 aa21.98■■□□□ 1.11
NFIL3-201ENST00000297689 PSTPIP2Q9H939 334 aa21.98■■□□□ 1.11
NFIL3-201ENST00000297689 EPHB6O15197 1021 aa21.97■■□□□ 1.11
NFIL3-201ENST00000297689 HLA-DOAP06340 250 aa21.97■■□□□ 1.11
NFIL3-201ENST00000297689 KCTD1Q719H9 257 aa21.97■■□□□ 1.11
NFIL3-201ENST00000297689 NOA1Q8NC60 698 aaKnown RBP21.97■■□□□ 1.11
NFIL3-201ENST00000297689 GLIS3Q8NEA6 775 aa21.97■■□□□ 1.11
NFIL3-201ENST00000297689 L1RE1Q9UN81 338 aa21.97■■□□□ 1.11
NFIL3-201ENST00000297689 CYP3A7-CYP3A51PA0A087WV96 503 aa21.97■■□□□ 1.11
NFIL3-201ENST00000297689 SOCS7O14512 581 aa21.97■■□□□ 1.11
NFIL3-201ENST00000297689 KRT86O43790 486 aa21.97■■□□□ 1.11
NFIL3-201ENST00000297689 FGFR1OPO95684 399 aaKnown RBP21.97■■□□□ 1.11
NFIL3-201ENST00000297689 CYP3A7P24462 503 aa21.97■■□□□ 1.11
NFIL3-201ENST00000297689 JAKMIP2Q96AA8 810 aa21.97■■□□□ 1.11
NFIL3-201ENST00000297689 LCA5LO95447 670 aa21.96■■□□□ 1.11
NFIL3-201ENST00000297689 ATP1A1P05023 1023 aaKnown RBP21.96■■□□□ 1.11
NFIL3-201ENST00000297689 TUBBP07437 444 aa21.96■■□□□ 1.11
NFIL3-201ENST00000297689 NCAPH2Q6IBW4 605 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms