RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ADRA2BP18089 450 aa16.38■□□□□ 0.21
SPIDR-201ENST00000297423 PTGISQ16647 500 aa16.38■□□□□ 0.21
SPIDR-201ENST00000297423 GKAP1Q5VSY0 366 aaPredicted RBP16.38■□□□□ 0.21
SPIDR-201ENST00000297423 CYB5D1Q6P9G0 228 aa16.38■□□□□ 0.21
SPIDR-201ENST00000297423 EMBQ6PCB8 327 aa16.38■□□□□ 0.21
SPIDR-201ENST00000297423 WNT7AO00755 349 aa16.38■□□□□ 0.21
SPIDR-201ENST00000297423 GTPBP6O43824 516 aaPredicted RBP16.38■□□□□ 0.21
SPIDR-201ENST00000297423 MDH1P40925 334 aaKnown RBP16.38■□□□□ 0.21
SPIDR-201ENST00000297423 GPKOWQ92917 476 aaPredicted RBP eCLIP16.38■□□□□ 0.21
SPIDR-201ENST00000297423 MAEAQ7L5Y9 396 aa16.38■□□□□ 0.21
SPIDR-201ENST00000297423 DNAAF5Q86Y56 855 aa16.38■□□□□ 0.21
SPIDR-201ENST00000297423 MDM1Q8TC05 714 aa16.38■□□□□ 0.21
SPIDR-201ENST00000297423 MIEF2Q96C03 454 aa16.38■□□□□ 0.21
SPIDR-201ENST00000297423 UPP2O95045 317 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 NTRK3Q16288 839 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 ZNF658Q5TYW1 1059 aaPredicted RBP16.37■□□□□ 0.21
SPIDR-201ENST00000297423 SPTY2D1Q68D10 685 aaPredicted RBP16.37■□□□□ 0.21
SPIDR-201ENST00000297423 DTHD1Q6ZMT9 781 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 KCNV2Q8TDN2 545 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 CYFIP2Q96F07 1278 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 TSGA10Q9BZW7 698 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 AATFQ9NY61 560 aaKnown RBP eCLIP16.37■□□□□ 0.21
SPIDR-201ENST00000297423 TNKSO95271 1327 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 LGALS16A8MUM7 142 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 RGL2O15211 777 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 CYP7A1P22680 504 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 SATB1Q01826 763 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 FERMT2Q96AC1 680 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 ANKRD2Q9GZV1 360 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 BSDC1Q9NW68 430 aaPredicted RBP16.37■□□□□ 0.21
SPIDR-201ENST00000297423 TBC1D7Q9P0N9 293 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 LIMA1Q9UHB6 759 aaKnown RBP16.37■□□□□ 0.21
SPIDR-201ENST00000297423 L3MBTL1Q9Y468 752 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 ADD2P35612 726 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 TXNRD1Q16881 649 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 CELF1Q92879 486 aaKnown RBP16.37■□□□□ 0.21
SPIDR-201ENST00000297423 CNNM2Q9H8M5 875 aa16.37■□□□□ 0.21
SPIDR-201ENST00000297423 FAM217BQ9NTX9 383 aaPredicted RBP16.37■□□□□ 0.21
SPIDR-201ENST00000297423 CTNND1O60716 968 aaKnown RBP16.36■□□□□ 0.21
SPIDR-201ENST00000297423 NFIXQ14938 502 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 HVCN1Q96D96 273 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 NUP98P52948 1817 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 FAM47AQ5JRC9 791 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 PAPD7Q5XG87 772 aaKnown RBP16.36■□□□□ 0.21
SPIDR-201ENST00000297423 CCDC63Q8NA47 563 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 AENQ8WTP8 325 aaKnown RBP16.36■□□□□ 0.21
SPIDR-201ENST00000297423 TMX4Q9H1E5 349 aaPredicted RBP16.36■□□□□ 0.21
SPIDR-201ENST00000297423 JAG2Q9Y219 1238 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 XDHP47989 1333 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 GMNCA6NCL1 334 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 GRIN2DO15399 1336 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 GSCP56915 257 aaPredicted RBP16.36■□□□□ 0.21
SPIDR-201ENST00000297423 MAGOHP61326 146 aaKnown RBP16.36■□□□□ 0.21
SPIDR-201ENST00000297423 LLGL1Q15334 1064 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 RIC1Q4ADV7 1423 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 APTXQ7Z2E3 356 aaKnown RBP16.36■□□□□ 0.21
SPIDR-201ENST00000297423 CCDC25Q86WR0 208 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 MAGOHBQ96A72 148 aaKnown RBP16.36■□□□□ 0.21
SPIDR-201ENST00000297423 ATP6V1G3Q96LB4 118 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 LRRC4BQ9NT99 713 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 TPX2Q9ULW0 747 aaKnown RBP16.36■□□□□ 0.21
SPIDR-201ENST00000297423 SLCO1A2P46721 670 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 UBE4AQ14139 1066 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 VGLL2Q8N8G2 317 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 ESR2Q92731 530 aa16.36■□□□□ 0.21
SPIDR-201ENST00000297423 LUC7LQ9NQ29 371 aaKnown RBP16.36■□□□□ 0.21
SPIDR-201ENST00000297423 CPSF2Q9P2I0 782 aaKnown RBP16.36■□□□□ 0.21
SPIDR-201ENST00000297423 SMIM22K7EJ46 135 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 GCFC2P16383 781 aaKnown RBP16.35■□□□□ 0.21
SPIDR-201ENST00000297423 GYG1P46976 350 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 TNNC1P63316 161 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 ZBED6P86452 979 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 ADCY1Q08828 1119 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 ANKS4BQ8N8V4 417 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 LBHD1Q9BQE6 289 aaPredicted RBP16.35■□□□□ 0.21
SPIDR-201ENST00000297423 KIF9Q9HAQ2 790 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 DDX20Q9UHI6 824 aaKnown RBP16.35■□□□□ 0.21
SPIDR-201ENST00000297423 ABCC12Q96J65 1359 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 LRRC41Q15345 812 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 SLC10A5Q5PT55 438 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 WDR59Q6PJI9 974 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 C3orf67Q6ZVT6 689 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 HEATR3Q7Z4Q2 680 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 BRD2P25440 801 aaKnown RBP16.35■□□□□ 0.21
SPIDR-201ENST00000297423 RASGRF1Q13972 1273 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 HAUS3Q68CZ6 603 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 VCPKMTQ9H867 229 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 TCP11L1Q9NUJ3 509 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 ATP8A1Q9Y2Q0 1164 aa16.35■□□□□ 0.21
SPIDR-201ENST00000297423 FOXP2O15409 715 aa16.34■□□□□ 0.21
SPIDR-201ENST00000297423 PALMO75781 387 aa16.34■□□□□ 0.21
SPIDR-201ENST00000297423 KIAA0753Q2KHM9 967 aa16.34■□□□□ 0.21
SPIDR-201ENST00000297423 SPATS2Q86XZ4 545 aaKnown RBP16.34■□□□□ 0.21
SPIDR-201ENST00000297423 CREG2Q8IUH2 290 aa16.34■□□□□ 0.21
SPIDR-201ENST00000297423 CCDC155Q8N6L0 562 aa16.34■□□□□ 0.21
SPIDR-201ENST00000297423 ELAC2Q9BQ52 826 aaKnown RBP16.34■□□□□ 0.21
SPIDR-201ENST00000297423 MLXIPLQ9NP71 852 aa16.34■□□□□ 0.21
SPIDR-201ENST00000297423 KCNG1Q9UIX4 513 aa16.34■□□□□ 0.21
SPIDR-201ENST00000297423 CAPN11Q9UMQ6 739 aa16.34■□□□□ 0.21
SPIDR-201ENST00000297423 MINPP1Q9UNW1 487 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms