RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 EHHADHQ08426 723 aa15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 DHX8Q14562 1220 aaKnown RBP15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 ARHGAP27Q6ZUM4 889 aa15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 FCHSD1Q86WN1 690 aa15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 SLFN12Q8IYM2 578 aa15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 GPC2Q8N158 579 aa15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 LPAR1Q92633 364 aa15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 AGBL1Q96MI9 1066 aa15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 TMX1Q9H3N1 280 aa15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 DOCK1Q14185 1865 aa15.24■□□□□ 0.03
CHMP4C-201ENST00000297265 LMNB1P20700 586 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 AMPD3Q01432 767 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 PDE4DQ08499 809 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 TRAF1Q13077 416 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 PRPF38AQ8NAV1 312 aaKnown RBP15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 KIAA0895Q8NCT3 520 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 HPS3Q969F9 1004 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 ZKSCAN4Q969J2 545 aaPredicted RBP15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 FEZ1Q99689 392 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 PARP14Q460N5 1801 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 SSC5DA1L4H1 1573 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 PHIPQ8WWQ0 1821 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 GCOM1H8Y6P7 765 aaPredicted RBP15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 MED24O75448 989 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 ICAM1P05362 532 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 POLR2MP0CAP2 368 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 ASIC1P78348 528 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 COBLL1Q53SF7 1204 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 TTI2Q6NXR4 508 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 CLEC4DQ8WXI8 215 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 DNAJC19Q96DA6 116 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 WDR18Q9BV38 432 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 FHDC1Q9C0D6 1143 aaPredicted RBP15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 LIMA1Q9UHB6 759 aaKnown RBP15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 VAV3Q9UKW4 847 aa15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 MRPL11Q9Y3B7 192 aaKnown RBP15.23■□□□□ 0.03
CHMP4C-201ENST00000297265 RLFQ13129 1914 aa15.22■□□□□ 0.03
CHMP4C-201ENST00000297265 PVALEFA0A1B0GWK0 134 aa15.22■□□□□ 0.03
CHMP4C-201ENST00000297265 E9PMD0 336 aa15.22■□□□□ 0.03
CHMP4C-201ENST00000297265 SPATA31C1P0DKV0 1188 aa15.22■□□□□ 0.03
CHMP4C-201ENST00000297265 VCAM1P19320 739 aa15.22■□□□□ 0.03
CHMP4C-201ENST00000297265 GOLGA8FQ08AF8 430 aa15.22■□□□□ 0.03
CHMP4C-201ENST00000297265 GOLGA8DPQ0D2H9 430 aa15.22■□□□□ 0.03
CHMP4C-201ENST00000297265 MTMR2Q13614 643 aa15.22■□□□□ 0.03
CHMP4C-201ENST00000297265 UNC13DQ70J99 1090 aa15.22■□□□□ 0.03
CHMP4C-201ENST00000297265 CATSPER3Q86XQ3 398 aa15.22■□□□□ 0.03
CHMP4C-201ENST00000297265 CCDC150Q8NCX0 1101 aa15.22■□□□□ 0.03
CHMP4C-201ENST00000297265 DDX12PQ92771 950 aa15.22■□□□□ 0.03
CHMP4C-201ENST00000297265 FAM20AQ96MK3 541 aa15.22■□□□□ 0.03
CHMP4C-201ENST00000297265 DUSP9Q99956 384 aaKnown RBP15.22■□□□□ 0.03
CHMP4C-201ENST00000297265 SPON1Q9HCB6 807 aa15.22■□□□□ 0.03
CHMP4C-201ENST00000297265 ABCB11O95342 1321 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 POTEB3A0JP26 581 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 USP27XA6NNY8 438 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 POTECB2RU33 542 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 MARCH6O60337 910 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 PTPRAP18433 802 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 CCT6AP40227 531 aaKnown RBP15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 HSD17B4P51659 736 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 GHRHRQ02643 423 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 SPP2Q13103 211 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 KRT31Q15323 416 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 POTEBQ6S5H4 581 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 SAMD1Q6SPF0 538 aaPredicted RBP15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 DYMQ7RTS9 669 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 APOBEC3FQ8IUX4 373 aaKnown RBP15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 TMEM139Q8IV31 216 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 SCYL3Q8IZE3 742 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 CDK5RAP3Q96JB5 506 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 SLF1Q9BQI6 1058 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 SLC38A10Q9HBR0 1119 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 KCND1Q9NSA2 647 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 GGA3Q9NZ52 723 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 COL20A1Q9P218 1284 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 KIAA1024Q9UPX6 916 aa15.21■□□□□ 0.03
CHMP4C-201ENST00000297265 SFPQP23246 707 aaKnown RBP eCLIP15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 TCP11X2Q5H9J9 407 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 SPECC1LQ69YQ0 1117 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 SLC30A10Q6XR72 485 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 KLRG1Q96E93 195 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 DHTKD1Q96HY7 919 aaPredicted RBP15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 NT5C3AQ9H0P0 336 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 EXOC1Q9NV70 894 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 EML1O00423 815 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 NFIBO00712 420 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 SLC26A4O43511 780 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 BACE1P56817 501 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 PSMC6P62333 389 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 UBXN2AP68543 259 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 DCAF15Q66K64 600 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 ANKRD40Q6AI12 368 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 TC2NQ8N9U0 490 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 WNK4Q96J92 1243 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 WRNIP1Q96S55 665 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 SEMA6BQ9H3T3 888 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 SLC39A2Q9NP94 309 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 CCPG1Q9ULG6 757 aa15.2■□□□□ 0.02
CHMP4C-201ENST00000297265 KDM3AQ9Y4C1 1321 aa15.19■□□□□ 0.02
CHMP4C-201ENST00000297265 PSMD10O75832 226 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms