RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 AMPD2Q01433 879 aa10.36□□□□□ -0.75
UBLCP1-201ENST00000296786 EHHADHQ08426 723 aa10.36□□□□□ -0.75
UBLCP1-201ENST00000296786 USP17L24Q0WX57 530 aa10.36□□□□□ -0.75
UBLCP1-201ENST00000296786 CCDC122Q5T0U0 273 aa10.36□□□□□ -0.75
UBLCP1-201ENST00000296786 USP17L6PQ6QN14 398 aa10.36□□□□□ -0.75
UBLCP1-201ENST00000296786 GLIS3Q8NEA6 775 aa10.36□□□□□ -0.75
UBLCP1-201ENST00000296786 MASTLQ96GX5 879 aa10.36□□□□□ -0.75
UBLCP1-201ENST00000296786 ZDHHC15Q96MV8 337 aa10.36□□□□□ -0.75
UBLCP1-201ENST00000296786 NHEJ1Q9H9Q4 299 aaPredicted RBP10.36□□□□□ -0.75
UBLCP1-201ENST00000296786 ARFGAP3Q9NP61 516 aa10.36□□□□□ -0.75
UBLCP1-201ENST00000296786 ZNHIT6Q9NWK9 470 aaKnown RBP10.36□□□□□ -0.75
UBLCP1-201ENST00000296786 PCDHA12Q9UN75 941 aa10.36□□□□□ -0.75
UBLCP1-201ENST00000296786 ATF5Q9Y2D1 282 aaPredicted RBP10.36□□□□□ -0.75
UBLCP1-201ENST00000296786 KIF13BQ9NQT8 1826 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 A0A1W2PQJ5 194 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 DDTLA6NHG4 134 aaPredicted RBP10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 ATP8B1O43520 1251 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 MMP10P09238 476 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 EEF2P13639 858 aaKnown RBP10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 GCFC2P16383 781 aaKnown RBP10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 CYLC1P35663 651 aaPredicted RBP10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 SLC1A4P43007 532 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 KRT83P78385 493 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 LRRC63Q05C16 580 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 TERF2Q15554 542 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 WHAMMP3Q1A5X7 153 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 QRICH1Q2TAL8 776 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 VWA3BQ502W6 1294 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 FIGNQ5HY92 759 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 PODNQ7Z5L7 613 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 UIMC1Q96RL1 719 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 LRRC27Q9C0I9 530 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 NDST4Q9H3R1 872 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 MYO6Q9UM54 1294 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 PSME4Q14997 1843 aa10.35□□□□□ -0.75
UBLCP1-201ENST00000296786 CCDC151A5D8V7 595 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 PSMD14O00487 310 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 RBM5P52756 815 aaKnown RBP eCLIP10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 PSMD2Q13200 908 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 LRRC41Q15345 812 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 CERKLQ49MI3 558 aaPredicted RBP10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 KIAA1328Q86T90 577 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 CCDC170Q8IYT3 715 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 ZNF622Q969S3 477 aaKnown RBP eCLIP10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 DNAJC19Q96DA6 116 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 DHX36Q9H2U1 1008 aaKnown RBP10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 PCDHA1Q9Y5I3 950 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 CTAGE15A4D2H0 777 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 RCCD1A6NED2 376 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 EIF3CLB5ME19 914 aaKnown RBP10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 ENC1O14682 589 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 KRT86O43790 486 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 CTAGE8P0CG41 777 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 ERCC3P19447 782 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 COASYQ13057 564 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 CDC37Q16543 378 aaPredicted RBP10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 MAN2A1Q16706 1144 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 NCAPH2Q6IBW4 605 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 LRRC55Q6ZSA7 311 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 CTAGE6Q86UF2 777 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 CTAGE4Q8IX94 777 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 MSANTD4Q8NCY6 345 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 MKL1Q969V6 931 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 JAKMIP2Q96AA8 810 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 AKT1S1Q96B36 256 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 PNKPQ96T60 521 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 EIF3CQ99613 913 aaKnown RBP10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 FAM198AQ9UFP1 575 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 ZHX1Q9UKY1 873 aaPredicted RBP10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 SIK3Q9Y2K2 1263 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 MYH11P35749 1972 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 ABCB11O95342 1321 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 KDM3AQ9Y4C1 1321 aa10.34□□□□□ -0.75
UBLCP1-201ENST00000296786 EPHB6O15197 1021 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 IPO7O95373 1038 aaKnown RBP10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 FGFR1OPO95684 399 aaKnown RBP10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 BRD3Q15059 726 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 HYIQ5T013 277 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 SLFN13Q68D06 897 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 ZNF662Q6ZS27 426 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 SH3BP5LQ7L8J4 393 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 TRAPPC11Q7Z392 1133 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 DCAF4Q8WV16 495 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 LACRTQ9GZZ8 138 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 NT5C3AQ9H0P0 336 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 KANSL2Q9H9L4 492 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 FAM207AQ9NSI2 230 aaPredicted RBP10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 NYAP2Q9P242 653 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 PI4KBQ9UBF8 816 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 HDAC6Q9UBN7 1215 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 E9PMD0 336 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 POTEB2H3BUK9 544 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 ATP1A1P05023 1023 aaKnown RBP10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 SSBP05455 408 aaKnown RBP eCLIP10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 PLEKP08567 350 aaPredicted RBP10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 RHOXF2BP0C7M4 288 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 HMGB2P26583 209 aaKnown RBP10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 TUBB4BP68371 445 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 CDK17Q00537 523 aa10.33□□□□□ -0.76
UBLCP1-201ENST00000296786 CYP27A1Q02318 531 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms