RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 USP11P51784 963 aa17.22■□□□□ 0.35
CCDC140-201ENST00000295226 SF3A1Q15459 793 aaKnown RBP17.22■□□□□ 0.35
CCDC140-201ENST00000295226 VSIG10LQ86VR7 867 aa17.22■□□□□ 0.35
CCDC140-201ENST00000295226 GJA10Q969M2 543 aa17.22■□□□□ 0.35
CCDC140-201ENST00000295226 MAML3Q96JK9 1138 aa17.22■□□□□ 0.35
CCDC140-201ENST00000295226 FLRT1Q9NZU1 646 aa17.22■□□□□ 0.35
CCDC140-201ENST00000295226 ADD3Q9UEY8 706 aaKnown RBP17.22■□□□□ 0.35
CCDC140-201ENST00000295226 CYP3A4P08684 503 aa17.21■□□□□ 0.35
CCDC140-201ENST00000295226 ITGB5P18084 799 aa17.21■□□□□ 0.35
CCDC140-201ENST00000295226 CCND2P30279 289 aa17.21■□□□□ 0.35
CCDC140-201ENST00000295226 PRR16Q569H4 304 aa17.21■□□□□ 0.35
CCDC140-201ENST00000295226 ANO1Q5XXA6 986 aa17.21■□□□□ 0.35
CCDC140-201ENST00000295226 PCNX4Q63HM2 1172 aa17.21■□□□□ 0.35
CCDC140-201ENST00000295226 JMYQ8N9B5 988 aa17.21■□□□□ 0.35
CCDC140-201ENST00000295226 ZNF396Q96N95 335 aaPredicted RBP17.21■□□□□ 0.35
CCDC140-201ENST00000295226 TMEM60Q9H2L4 133 aa17.21■□□□□ 0.35
CCDC140-201ENST00000295226 ATP6V1DQ9Y5K8 247 aa17.21■□□□□ 0.35
CCDC140-201ENST00000295226 FOXN1O15353 648 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 RGS2P41220 211 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 TRAPPC10P48553 1259 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 PDE4DQ08499 809 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 ERO1AQ96HE7 468 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 IWS1Q96ST2 819 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 WDR11Q9BZH6 1224 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.2■□□□□ 0.34
CCDC140-201ENST00000295226 DDX25Q9UHL0 483 aaKnown RBP17.2■□□□□ 0.34
CCDC140-201ENST00000295226 CASP8AP2Q9UKL3 1982 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 FIBPO43427 364 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 RGS20O76081 388 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 BAG4O95429 457 aaKnown RBP17.2■□□□□ 0.34
CCDC140-201ENST00000295226 ARP10275 920 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 EDNRBP24530 442 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 CIITAP33076 1130 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 PTGDRQ13258 359 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 TPRNQ4KMQ1 711 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 ARMCX2Q7L311 632 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 SOCS4Q8WXH5 440 aa17.2■□□□□ 0.34
CCDC140-201ENST00000295226 IGLV3-22A0A075B6J6 115 aa17.19■□□□□ 0.34
CCDC140-201ENST00000295226 CYP3A7-CYP3A51PA0A087WV96 503 aa17.19■□□□□ 0.34
CCDC140-201ENST00000295226 TRAK2O60296 914 aa17.19■□□□□ 0.34
CCDC140-201ENST00000295226 CYP3A7P24462 503 aa17.19■□□□□ 0.34
CCDC140-201ENST00000295226 MARCKSP29966 332 aaPredicted RBP17.19■□□□□ 0.34
CCDC140-201ENST00000295226 PTPAQ15257 358 aa17.19■□□□□ 0.34
CCDC140-201ENST00000295226 STXBP2Q15833 593 aa17.19■□□□□ 0.34
CCDC140-201ENST00000295226 CEP55Q53EZ4 464 aa17.19■□□□□ 0.34
CCDC140-201ENST00000295226 PRAMEF19Q5SWL8 479 aa17.19■□□□□ 0.34
CCDC140-201ENST00000295226 SEPT14Q6ZU15 432 aa17.19■□□□□ 0.34
CCDC140-201ENST00000295226 PLA2G4DQ86XP0 818 aa17.19■□□□□ 0.34
CCDC140-201ENST00000295226 C4orf32Q8N8J7 132 aa17.19■□□□□ 0.34
CCDC140-201ENST00000295226 LENG9Q96B70 501 aa17.19■□□□□ 0.34
CCDC140-201ENST00000295226 MXRA8Q9BRK3 442 aa17.19■□□□□ 0.34
CCDC140-201ENST00000295226 PKD2L1Q9P0L9 805 aa17.19■□□□□ 0.34
CCDC140-201ENST00000295226 UBIAD1Q9Y5Z9 338 aa17.19■□□□□ 0.34
CCDC140-201ENST00000295226 ZNF236Q9UL36 1845 aa17.18■□□□□ 0.34
CCDC140-201ENST00000295226 SNAI1O95863 264 aaPredicted RBP17.18■□□□□ 0.34
CCDC140-201ENST00000295226 HOXC6P09630 235 aa17.18■□□□□ 0.34
CCDC140-201ENST00000295226 CYP2C19P33261 490 aa17.18■□□□□ 0.34
CCDC140-201ENST00000295226 KRT85P78386 507 aa17.18■□□□□ 0.34
CCDC140-201ENST00000295226 PPP4R3AQ6IN85 833 aa17.18■□□□□ 0.34
CCDC140-201ENST00000295226 FBXO16Q8IX29 292 aaPredicted RBP17.18■□□□□ 0.34
CCDC140-201ENST00000295226 APBA2Q99767 749 aa17.18■□□□□ 0.34
CCDC140-201ENST00000295226 TINF2Q9BSI4 451 aa17.18■□□□□ 0.34
CCDC140-201ENST00000295226 SLC5A4Q9NY91 659 aa17.18■□□□□ 0.34
CCDC140-201ENST00000295226 SRRDQ9UH36 339 aa17.18■□□□□ 0.34
CCDC140-201ENST00000295226 DIS3Q9Y2L1 958 aaKnown RBP17.18■□□□□ 0.34
CCDC140-201ENST00000295226 CENPFP49454 3210 aa17.18■□□□□ 0.34
CCDC140-201ENST00000295226 ASB14A6NK59 587 aa17.17■□□□□ 0.34
CCDC140-201ENST00000295226 MEIS1O00470 390 aa17.17■□□□□ 0.34
CCDC140-201ENST00000295226 NEMFO60524 1076 aa17.17■□□□□ 0.34
CCDC140-201ENST00000295226 EIF3JO75822 258 aaKnown RBP17.17■□□□□ 0.34
CCDC140-201ENST00000295226 HSPA1AP0DMV8 641 aaKnown RBP17.17■□□□□ 0.34
CCDC140-201ENST00000295226 HSPA1BP0DMV9 641 aaKnown RBP17.17■□□□□ 0.34
CCDC140-201ENST00000295226 STK38Q15208 465 aa17.17■□□□□ 0.34
CCDC140-201ENST00000295226 L1TD1Q5T7N2 865 aaKnown RBP17.17■□□□□ 0.34
CCDC140-201ENST00000295226 LINC00301Q8NCQ3 95 aa17.17■□□□□ 0.34
CCDC140-201ENST00000295226 MBOAT7Q96N66 472 aa17.17■□□□□ 0.34
CCDC140-201ENST00000295226 JADE2Q9NQC1 790 aa17.17■□□□□ 0.34
CCDC140-201ENST00000295226 PDGFCQ9NRA1 345 aa17.17■□□□□ 0.34
CCDC140-201ENST00000295226 POLR3EQ9NVU0 708 aa17.17■□□□□ 0.34
CCDC140-201ENST00000295226 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.17■□□□□ 0.34
CCDC140-201ENST00000295226 CFAP45Q9UL16 551 aa17.17■□□□□ 0.34
CCDC140-201ENST00000295226 MSH4O15457 936 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 SORBS3O60504 671 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 HSPA8P11142 646 aaKnown RBP17.16■□□□□ 0.34
CCDC140-201ENST00000295226 ELNP15502 786 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 NASPP49321 788 aaPredicted RBP17.16■□□□□ 0.34
CCDC140-201ENST00000295226 SEMA3FQ13275 785 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 Q4G0T1 1027 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 TMEM63BQ5T3F8 832 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 MAMDC4Q6UXC1 1216 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 ZNF467Q7Z7K2 595 aaPredicted RBP17.16■□□□□ 0.34
CCDC140-201ENST00000295226 MORC4Q8TE76 937 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 LEO1Q8WVC0 666 aaPredicted RBP17.16■□□□□ 0.34
CCDC140-201ENST00000295226 HAS1Q92839 578 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 BCAS3Q9H6U6 928 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 TRIM17Q9Y577 477 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 KIAA1217Q5T5P2 1943 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 ATP9AO75110 1047 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 GCFC2P16383 781 aaKnown RBP17.16■□□□□ 0.34
CCDC140-201ENST00000295226 PTGS1P23219 599 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms