RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 MMGT1Q8N4V1 131 aa15.19■□□□□ 0.02
NCSTN-201ENST00000294785 ALS2CR12Q96Q35 445 aa15.19■□□□□ 0.02
NCSTN-201ENST00000294785 TSPYL1Q9H0U9 437 aa15.19■□□□□ 0.02
NCSTN-201ENST00000294785 NUCKS1Q9H1E3 243 aaKnown RBP15.19■□□□□ 0.02
NCSTN-201ENST00000294785 TMEM260Q9NX78 707 aa15.19■□□□□ 0.02
NCSTN-201ENST00000294785 PODXL2Q9NZ53 605 aa15.19■□□□□ 0.02
NCSTN-201ENST00000294785 PJA2O43164 708 aa15.18■□□□□ 0.02
NCSTN-201ENST00000294785 C2CD5Q86YS7 1000 aa15.18■□□□□ 0.02
NCSTN-201ENST00000294785 SNX29Q8TEQ0 813 aa15.18■□□□□ 0.02
NCSTN-201ENST00000294785 NAP1L4Q99733 375 aaKnown RBP15.18■□□□□ 0.02
NCSTN-201ENST00000294785 UBA5Q9GZZ9 404 aa15.18■□□□□ 0.02
NCSTN-201ENST00000294785 DEF6Q9H4E7 631 aa15.18■□□□□ 0.02
NCSTN-201ENST00000294785 SLC26A4O43511 780 aa15.18■□□□□ 0.02
NCSTN-201ENST00000294785 SLC37A4O43826 429 aa15.18■□□□□ 0.02
NCSTN-201ENST00000294785 TCP1P17987 556 aaKnown RBP15.18■□□□□ 0.02
NCSTN-201ENST00000294785 ADRA2BP18089 450 aa15.18■□□□□ 0.02
NCSTN-201ENST00000294785 LRRC55Q6ZSA7 311 aa15.18■□□□□ 0.02
NCSTN-201ENST00000294785 HPS3Q969F9 1004 aa15.18■□□□□ 0.02
NCSTN-201ENST00000294785 HPCAL4Q9UM19 191 aa15.18■□□□□ 0.02
NCSTN-201ENST00000294785 DUSP10Q9Y6W6 482 aa15.18■□□□□ 0.02
NCSTN-201ENST00000294785 QSER1Q2KHR3 1735 aa15.17■□□□□ 0.02
NCSTN-201ENST00000294785 IGKV6D-41A0A0C4DH26 115 aa15.17■□□□□ 0.02
NCSTN-201ENST00000294785 SSU72P8A0A1W2PR75 194 aa15.17■□□□□ 0.02
NCSTN-201ENST00000294785 GCFC2P16383 781 aaKnown RBP15.17■□□□□ 0.02
NCSTN-201ENST00000294785 MAPK8IP2Q13387 824 aaPredicted RBP15.17■□□□□ 0.02
NCSTN-201ENST00000294785 PRR5LQ6MZQ0 368 aa15.17■□□□□ 0.02
NCSTN-201ENST00000294785 CCDC155Q8N6L0 562 aa15.17■□□□□ 0.02
NCSTN-201ENST00000294785 GPR101Q96P66 508 aaPredicted RBP15.17■□□□□ 0.02
NCSTN-201ENST00000294785 ATAD5Q96QE3 1844 aa15.17■□□□□ 0.02
NCSTN-201ENST00000294785 LRRC37AA6NMS7 1700 aa15.17■□□□□ 0.02
NCSTN-201ENST00000294785 PNMA6FA0A0J9YX94 578 aa15.17■□□□□ 0.02
NCSTN-201ENST00000294785 TDP2O95551 362 aa15.17■□□□□ 0.02
NCSTN-201ENST00000294785 CAPN2P17655 700 aa15.17■□□□□ 0.02
NCSTN-201ENST00000294785 GABPAQ06546 454 aa15.17■□□□□ 0.02
NCSTN-201ENST00000294785 CCNI2Q6ZMN8 369 aaPredicted RBP15.17■□□□□ 0.02
NCSTN-201ENST00000294785 GOLGA6L1Q8N7Z2 621 aa15.17■□□□□ 0.02
NCSTN-201ENST00000294785 DDX12PQ92771 950 aa15.17■□□□□ 0.02
NCSTN-201ENST00000294785 RBM17Q96I25 401 aaKnown RBP15.17■□□□□ 0.02
NCSTN-201ENST00000294785 MMRN2Q9H8L6 949 aa15.17■□□□□ 0.02
NCSTN-201ENST00000294785 FAM207AQ9NSI2 230 aaPredicted RBP15.17■□□□□ 0.02
NCSTN-201ENST00000294785 KDM3AQ9Y4C1 1321 aa15.17■□□□□ 0.02
NCSTN-201ENST00000294785 LTBP1Q14766 1721 aa15.17■□□□□ 0.02
NCSTN-201ENST00000294785 AKR1B10O60218 316 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 TNNT3P45378 269 aaPredicted RBP15.16■□□□□ 0.02
NCSTN-201ENST00000294785 CLK2P49760 499 aaKnown RBP15.16■□□□□ 0.02
NCSTN-201ENST00000294785 DYMQ7RTS9 669 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 CREG2Q8IUH2 290 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 SYN2Q92777 582 aaPredicted RBP15.16■□□□□ 0.02
NCSTN-201ENST00000294785 NT5C3AQ9H0P0 336 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 SUGT1Q9Y2Z0 365 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 HYOU1Q9Y4L1 999 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 POTEMA6NI47 508 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 LRRC53A6NM62 1247 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 EDIL3O43854 480 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 BBOX1O75936 387 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 PLEKP08567 350 aaPredicted RBP15.16■□□□□ 0.02
NCSTN-201ENST00000294785 EIF4A3P38919 411 aaKnown RBP15.16■□□□□ 0.02
NCSTN-201ENST00000294785 RAD51AP2Q09MP3 1159 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 HYIQ5T013 277 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 KRT26Q7Z3Y9 468 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 MYOCDQ8IZQ8 938 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 RNF10Q8N5U6 811 aaKnown RBP15.16■□□□□ 0.02
NCSTN-201ENST00000294785 BAP1Q92560 729 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 COA7Q96BR5 231 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 SWAP70Q9UH65 585 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 TSKSQ9UJT2 592 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 FRMPD2Q68DX3 1309 aaPredicted RBP15.16■□□□□ 0.02
NCSTN-201ENST00000294785 PDE2AO00408 941 aaPredicted RBP15.16■□□□□ 0.02
NCSTN-201ENST00000294785 NKRFO15226 690 aaKnown RBP eCLIP15.16■□□□□ 0.02
NCSTN-201ENST00000294785 TTLL1O95922 423 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 FKBP3Q00688 224 aaKnown RBP15.16■□□□□ 0.02
NCSTN-201ENST00000294785 PDXDC1Q6P996 788 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 SLC51AQ86UW1 340 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 CUL5Q93034 780 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 FAM184BQ9ULE4 1060 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 CAPN6Q9Y6Q1 641 aa15.16■□□□□ 0.02
NCSTN-201ENST00000294785 EPHB6O15197 1021 aa15.15■□□□□ 0.02
NCSTN-201ENST00000294785 ZNF185O15231 689 aa15.15■□□□□ 0.02
NCSTN-201ENST00000294785 RNF40O75150 1001 aa15.15■□□□□ 0.02
NCSTN-201ENST00000294785 GNA14O95837 355 aa15.15■□□□□ 0.02
NCSTN-201ENST00000294785 SYF2O95926 243 aaKnown RBP15.15■□□□□ 0.02
NCSTN-201ENST00000294785 ZNF543Q08ER8 600 aa15.15■□□□□ 0.02
NCSTN-201ENST00000294785 ASTE1Q2TB18 679 aaPredicted RBP15.15■□□□□ 0.02
NCSTN-201ENST00000294785 ZCWPW2Q504Y3 356 aa15.15■□□□□ 0.02
NCSTN-201ENST00000294785 GPATCH4Q5T3I0 446 aaKnown RBP15.15■□□□□ 0.02
NCSTN-201ENST00000294785 RRAGAQ7L523 313 aa15.15■□□□□ 0.02
NCSTN-201ENST00000294785 CEP63Q96MT8 703 aa15.15■□□□□ 0.02
NCSTN-201ENST00000294785 CRACR2AQ9BSW2 395 aa15.15■□□□□ 0.02
NCSTN-201ENST00000294785 GLT8D2Q9H1C3 349 aa15.15■□□□□ 0.02
NCSTN-201ENST00000294785 BMP2KQ9NSY1 1161 aaPredicted RBP15.15■□□□□ 0.02
NCSTN-201ENST00000294785 RNF216Q9NWF9 866 aaPredicted RBP15.15■□□□□ 0.02
NCSTN-201ENST00000294785 COL4A3BPQ9Y5P4 624 aa15.15■□□□□ 0.02
NCSTN-201ENST00000294785 GREB1LQ9C091 1923 aaPredicted RBP15.15■□□□□ 0.02
NCSTN-201ENST00000294785 MYH7BA7E2Y1 1941 aa15.15■□□□□ 0.02
NCSTN-201ENST00000294785 RBAK-RBAKDNI3L0D1 243 aa15.15■□□□□ 0.02
NCSTN-201ENST00000294785 PRPF6O94906 941 aaKnown RBP15.15■□□□□ 0.02
NCSTN-201ENST00000294785 MRPL12P52815 198 aaKnown RBP15.15■□□□□ 0.02
NCSTN-201ENST00000294785 CACNA2D4Q7Z3S7 1137 aa15.15■□□□□ 0.02
NCSTN-201ENST00000294785 FAM204AQ9H8W3 233 aa15.15■□□□□ 0.02
NCSTN-201ENST00000294785 LUC7LQ9NQ29 371 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms