RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 NSFP46459 744 aaKnown RBP13.47□□□□□ -0.25
SLX4-201ENST00000294008 ESRRGP62508 458 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 TRIM60Q495X7 471 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 MFSD14BQ5SR56 506 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 NLRP9Q7RTR0 991 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 CACTINQ8WUQ7 758 aaKnown RBP13.47□□□□□ -0.25
SLX4-201ENST00000294008 HEXIM2Q96MH2 286 aaKnown RBP13.47□□□□□ -0.25
SLX4-201ENST00000294008 NUP58Q9BVL2 599 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 HNRNPDLO14979 420 aaKnown RBP13.47□□□□□ -0.25
SLX4-201ENST00000294008 SRGAP2CP0DJJ0 459 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 TTC23LQ6PF05 361 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 CATSPER3Q86XQ3 398 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 ZNF212Q9UDV6 495 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 MRPL11Q9Y3B7 192 aaKnown RBP13.47□□□□□ -0.25
SLX4-201ENST00000294008 KRT7P08729 469 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 RPSAP08865 295 aaKnown RBP13.47□□□□□ -0.25
SLX4-201ENST00000294008 ASIC4Q96FT7 647 aa13.47□□□□□ -0.25
SLX4-201ENST00000294008 SMC5Q8IY18 1101 aa13.46□□□□□ -0.25
SLX4-201ENST00000294008 KLHDC4Q8TBB5 520 aa13.46□□□□□ -0.25
SLX4-201ENST00000294008 NDFIP2Q9NV92 336 aa13.46□□□□□ -0.25
SLX4-201ENST00000294008 IFNAR2P48551 515 aa13.46□□□□□ -0.25
SLX4-201ENST00000294008 TMED2Q15363 201 aa13.46□□□□□ -0.25
SLX4-201ENST00000294008 CC2D1AQ6P1N0 951 aaPredicted RBP13.46□□□□□ -0.25
SLX4-201ENST00000294008 GOLGA8QA0A0J9YX86 632 aa13.46□□□□□ -0.25
SLX4-201ENST00000294008 GOLGA8OA6NCC3 632 aa13.46□□□□□ -0.25
SLX4-201ENST00000294008 GOLGA8NF8WBI6 632 aa13.46□□□□□ -0.25
SLX4-201ENST00000294008 SLC9A1P19634 815 aa13.46□□□□□ -0.25
SLX4-201ENST00000294008 BCAMP50895 628 aa13.46□□□□□ -0.25
SLX4-201ENST00000294008 TRIM32Q13049 653 aa13.46□□□□□ -0.25
SLX4-201ENST00000294008 REXO1Q8N1G1 1221 aaKnown RBP13.46□□□□□ -0.25
SLX4-201ENST00000294008 PCIF1Q9H4Z3 704 aa13.46□□□□□ -0.25
SLX4-201ENST00000294008 ZNF233A6NK53 670 aa13.46□□□□□ -0.25
SLX4-201ENST00000294008 CACNB2Q08289 660 aaPredicted RBP13.46□□□□□ -0.25
SLX4-201ENST00000294008 POTEDQ86YR6 584 aa13.46□□□□□ -0.25
SLX4-201ENST00000294008 MKL2Q9ULH7 1088 aa13.46□□□□□ -0.25
SLX4-201ENST00000294008 HSPA6P17066 643 aa13.46□□□□□ -0.26
SLX4-201ENST00000294008 E4F1Q66K89 784 aaPredicted RBP13.46□□□□□ -0.26
SLX4-201ENST00000294008 C11orf96Q7Z7L8 435 aa13.46□□□□□ -0.26
SLX4-201ENST00000294008 EGFL8Q99944 293 aa13.46□□□□□ -0.26
SLX4-201ENST00000294008 TTC21BQ7Z4L5 1316 aa13.46□□□□□ -0.26
SLX4-201ENST00000294008 E5RI56 91 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 KLC3Q6P597 504 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 RFWD2Q8NHY2 731 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 ANKRD49Q8WVL7 239 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 ULK4Q96C45 1275 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 TRAF3IP3Q9Y228 551 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 E9PMD0 336 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 ZKSCAN8Q15776 578 aaPredicted RBP13.45□□□□□ -0.26
SLX4-201ENST00000294008 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.45□□□□□ -0.26
SLX4-201ENST00000294008 TMC2Q8TDI7 906 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 ANKS3Q6ZW76 656 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 RASEFQ8IZ41 740 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 NDE1Q9NXR1 346 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 CIITAP33076 1130 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 NLRP4Q96MN2 994 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 NACC1Q96RE7 527 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 TBK1Q9UHD2 729 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 KLF15Q9UIH9 416 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 LRRC53A6NM62 1247 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 MTX1Q13505 466 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 ADCK5Q3MIX3 580 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 DDX42Q86XP3 938 aaKnown RBP eCLIP13.45□□□□□ -0.26
SLX4-201ENST00000294008 TRPC5Q9UL62 973 aaPredicted RBP13.45□□□□□ -0.26
SLX4-201ENST00000294008 SPDYE5A6NIY4 337 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 TMEM232C9JQI7 657 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 COBLO75128 1261 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 LMNAP02545 664 aaKnown RBP13.45□□□□□ -0.26
SLX4-201ENST00000294008 CARSP49589 748 aaKnown RBP13.45□□□□□ -0.26
SLX4-201ENST00000294008 POLR2FP61218 127 aaKnown RBP13.45□□□□□ -0.26
SLX4-201ENST00000294008 TRIP13Q15645 432 aaPredicted RBP13.45□□□□□ -0.26
SLX4-201ENST00000294008 SPDYE7PQ495Y7 208 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 LRCH2Q5VUJ6 765 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 CYP4F22Q6NT55 531 aa13.45□□□□□ -0.26
SLX4-201ENST00000294008 CROCCP2Q86T23 111 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 ARMC2Q8NEN0 867 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 WARS2Q9UGM6 360 aaKnown RBP13.44□□□□□ -0.26
SLX4-201ENST00000294008 CAPN7Q9Y6W3 813 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 NCKAP5LQ9HCH0 1330 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 PRR23AA6NEV1 266 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 DCTN3O75935 186 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 SEC24BO95487 1268 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 GUCA1CO95843 209 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 VCAM1P19320 739 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 C16orf62Q7Z3J2 963 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 SLC10A4Q96EP9 437 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 MYBP10242 640 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 MYL7Q01449 175 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 ALKBH2Q6NS38 261 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 MIS18BP1Q6P0N0 1132 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 GJA10Q969M2 543 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 XAGE2Q96GT9 111 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 STRIP2Q9ULQ0 834 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 PAMP19021 973 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 PRIM1P49642 420 aaKnown RBP13.44□□□□□ -0.26
SLX4-201ENST00000294008 KCNG1Q9UIX4 513 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 ERBB3P21860 1342 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 POLA1P09884 1462 aaPredicted RBP13.44□□□□□ -0.26
SLX4-201ENST00000294008 MCF2LO15068 1137 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 KRT1P04264 644 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 HSPA8P11142 646 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms