RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 FKBP15Q5T1M5 1219 aa20.44■□□□□ 0.86
SHKBP1-201ENST00000291842 CC2D1AQ6P1N0 951 aaPredicted RBP20.44■□□□□ 0.86
SHKBP1-201ENST00000291842 TRIM34Q9BYJ4 488 aa20.44■□□□□ 0.86
SHKBP1-201ENST00000291842 ATF5Q9Y2D1 282 aaPredicted RBP20.44■□□□□ 0.86
SHKBP1-201ENST00000291842 NRXN2Q9P2S2 1712 aa20.44■□□□□ 0.86
SHKBP1-201ENST00000291842 E9PMD0 336 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 CACNB1Q02641 598 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 RAD51AP2Q09MP3 1159 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 CCDC122Q5T0U0 273 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 SIAH1Q8IUQ4 282 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 NHEJ1Q9H9Q4 299 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 FAM207AQ9NSI2 230 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 PI4KBQ9UBF8 816 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 EPHB6O15197 1021 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 STAT3P40763 770 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 PLA2G4AP47712 749 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 ZBED6P86452 979 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 CYP27A1Q02318 531 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 MEA1Q16626 185 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 COBLL1Q53SF7 1204 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 DACT2Q5SW24 774 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 CEP112Q8N8E3 955 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 NUP58Q9BVL2 599 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 ZNHIT6Q9NWK9 470 aaKnown RBP20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 HDAC6Q9UBN7 1215 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 KIAA1024Q9UPX6 916 aa20.43■□□□□ 0.86
SHKBP1-201ENST00000291842 NPHP3-ACAD11A0A0J9YXS1 232 aa20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 RCCD1A6NED2 376 aa20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 SASH3O75995 380 aa20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 PLEKP08567 350 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 CHRNA5P30532 468 aa20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 VWA3BQ502W6 1294 aa20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 NCAPH2Q6IBW4 605 aa20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 KIAA1328Q86T90 577 aa20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 GUF1Q8N442 669 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 FGFBP2Q9BYJ0 223 aa20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 NDST4Q9H3R1 872 aa20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 KANSL2Q9H9L4 492 aa20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 ICA1Q05084 483 aa20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 IKQ13123 557 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 USH1GQ495M9 461 aa20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 DNAJC19Q96DA6 116 aa20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 ERGIC2Q96RQ1 377 aa20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 GTPBP4Q9BZE4 634 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 LACRTQ9GZZ8 138 aa20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 TDRD3Q9H7E2 651 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-201ENST00000291842 SCN9AQ15858 1988 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 POTEB3A0JP26 581 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 POTECB2RU33 542 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 COASYQ13057 564 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 AOC3Q16853 763 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 STRIP1Q5VSL9 837 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 POTEBQ6S5H4 581 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 CCDC155Q8N6L0 562 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 P2RX7Q99572 595 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 ANO3Q9BYT9 981 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 DHX36Q9H2U1 1008 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 MMRN2Q9H8L6 949 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 ANKZF1Q9H8Y5 726 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 MYO1AQ9UBC5 1043 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 ZHX1Q9UKY1 873 aaPredicted RBP20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 DUSP10Q9Y6W6 482 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 GREB1LQ9C091 1923 aaPredicted RBP20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 TBC1D8O95759 1140 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 RHOXF2BP0C7M4 288 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 JAG1P78504 1218 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 RETREG2Q8NC44 543 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 ZBTB9Q96C00 473 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 RHOXF2Q9BQY4 288 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 HAUS4Q9H6D7 363 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 PANK4Q9NVE7 773 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 PRDM4Q9UKN5 801 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 MYO6Q9UM54 1294 aa20.41■□□□□ 0.86
SHKBP1-201ENST00000291842 SIPA1L1O43166 1804 aa20.4■□□□□ 0.86
SHKBP1-201ENST00000291842 GCFC2P16383 781 aaKnown RBP20.4■□□□□ 0.86
SHKBP1-201ENST00000291842 EHHADHQ08426 723 aa20.4■□□□□ 0.86
SHKBP1-201ENST00000291842 KRT26Q7Z3Y9 468 aa20.4■□□□□ 0.86
SHKBP1-201ENST00000291842 MKL1Q969V6 931 aa20.4■□□□□ 0.86
SHKBP1-201ENST00000291842 NYAP2Q9P242 653 aa20.4■□□□□ 0.86
SHKBP1-201ENST00000291842 F5H6K3 240 aa20.39■□□□□ 0.86
SHKBP1-201ENST00000291842 MEIS2O14770 477 aa20.39■□□□□ 0.86
SHKBP1-201ENST00000291842 CYLC1P35663 651 aaPredicted RBP20.39■□□□□ 0.86
SHKBP1-201ENST00000291842 KLRC3Q07444 240 aa20.39■□□□□ 0.86
SHKBP1-201ENST00000291842 JAKMIP2Q96AA8 810 aa20.39■□□□□ 0.86
SHKBP1-201ENST00000291842 ARFGAP3Q9NP61 516 aa20.39■□□□□ 0.86
SHKBP1-201ENST00000291842 SRGAP2O75044 1071 aa20.39■□□□□ 0.85
SHKBP1-201ENST00000291842 KRT83P78385 493 aa20.39■□□□□ 0.85
SHKBP1-201ENST00000291842 AMPD2Q01433 879 aa20.39■□□□□ 0.85
SHKBP1-201ENST00000291842 LRRC55Q6ZSA7 311 aa20.39■□□□□ 0.85
SHKBP1-201ENST00000291842 NELFCDQ8IXH7 590 aa20.39■□□□□ 0.85
SHKBP1-201ENST00000291842 DCAF4Q8WV16 495 aa20.39■□□□□ 0.85
SHKBP1-201ENST00000291842 PNKPQ96T60 521 aa20.39■□□□□ 0.85
SHKBP1-201ENST00000291842 IDI2Q9BXS1 227 aa20.39■□□□□ 0.85
SHKBP1-201ENST00000291842 TANGO6Q9C0B7 1094 aa20.39■□□□□ 0.85
SHKBP1-201ENST00000291842 SIK3Q9Y2K2 1263 aa20.39■□□□□ 0.85
SHKBP1-201ENST00000291842 ARFGEF1Q9Y6D6 1849 aa20.39■□□□□ 0.85
SHKBP1-201ENST00000291842 H0YIN7 160 aa20.38■□□□□ 0.85
SHKBP1-201ENST00000291842 ATP1A1P05023 1023 aaKnown RBP20.38■□□□□ 0.85
SHKBP1-201ENST00000291842 GABPB1Q06547 395 aaPredicted RBP20.38■□□□□ 0.85
SHKBP1-201ENST00000291842 MAN2A1Q16706 1144 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms