RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 NONOQ15233 471 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHRNB3-201ENST00000289957 TTC38Q5R3I4 469 aa12.97□□□□□ -0.33
CHRNB3-201ENST00000289957 TAAR1Q96RJ0 339 aa12.97□□□□□ -0.33
CHRNB3-201ENST00000289957 POLR3EQ9NVU0 708 aa12.97□□□□□ -0.33
CHRNB3-201ENST00000289957 MRPL11Q9Y3B7 192 aaKnown RBP12.97□□□□□ -0.33
CHRNB3-201ENST00000289957 MKI67P46013 3256 aaKnown RBP12.96□□□□□ -0.33
CHRNB3-201ENST00000289957 ABCB11O95342 1321 aa12.96□□□□□ -0.33
CHRNB3-201ENST00000289957 PGK2P07205 417 aa12.96□□□□□ -0.33
CHRNB3-201ENST00000289957 WDR78Q5VTH9 848 aa12.96□□□□□ -0.33
CHRNB3-201ENST00000289957 ADALQ6DHV7 355 aa12.96□□□□□ -0.33
CHRNB3-201ENST00000289957 ANKRD23Q86SG2 305 aa12.96□□□□□ -0.33
CHRNB3-201ENST00000289957 POTEDQ86YR6 584 aa12.96□□□□□ -0.33
CHRNB3-201ENST00000289957 IFNL1Q8IU54 200 aa12.96□□□□□ -0.33
CHRNB3-201ENST00000289957 DRC7Q8IY82 874 aa12.96□□□□□ -0.33
CHRNB3-201ENST00000289957 FMR1NBQ8N0W7 255 aaPredicted RBP12.96□□□□□ -0.33
CHRNB3-201ENST00000289957 FSIP1Q8NA03 581 aa12.96□□□□□ -0.33
CHRNB3-201ENST00000289957 SYTL5Q8TDW5 730 aaPredicted RBP12.96□□□□□ -0.33
CHRNB3-201ENST00000289957 NAT10Q9H0A0 1025 aaKnown RBP12.96□□□□□ -0.33
CHRNB3-201ENST00000289957 FAM86B1E9PN63 330 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 GCOM1H8Y6P7 765 aaPredicted RBP12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 FAM86B2P0C5J1 330 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 POLR2MP0CAP2 368 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 OSBPP22059 807 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 KCNJ6P48051 423 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 HSD17B4P51659 736 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 GSDMDP57764 484 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 ERVK-9P63128 1117 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 ERVK-24P63145 666 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 CAP1Q01518 475 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 PTGDRQ13258 359 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 USP49Q70CQ1 688 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 DHX40Q8IX18 779 aaKnown RBP12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 DOCK3Q8IZD9 2030 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 KCNG4Q8TDN1 519 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 CACTINQ8WUQ7 758 aaKnown RBP12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 CAPNS2Q96L46 248 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 IMPACTQ9P2X3 320 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 PCDHA7Q9UN72 937 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 ZSWIM8A7E2V4 1837 aa12.96□□□□□ -0.34
CHRNB3-201ENST00000289957 MYPNQ86TC9 1320 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 TESPA1A2RU30 521 aaPredicted RBP12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 ATP2A1O14983 1001 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 EIF2AK2P19525 551 aaKnown RBP12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 CDC25AP30304 524 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 LRMPQ12912 555 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 RILPL1Q5EBL4 403 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 UTP14CQ5TAP6 766 aaKnown RBP12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 GALNT17Q6IS24 598 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 KRT25Q7Z3Z0 450 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 LRRC8AQ8IWT6 810 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 C4orf32Q8N8J7 132 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 CRYGNQ8WXF5 182 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 CYP39A1Q9NYL5 469 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 KIF2AO00139 706 aaPredicted RBP12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 PIK3CDO00329 1044 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 ME1P48163 572 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 ARHGAP4P98171 946 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 SLC39A14Q15043 492 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 STK38Q15208 465 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 DEFB115Q30KQ5 88 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 CCDC144BQ3MJ40 725 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 RNF207Q6ZRF8 634 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 NEK8Q86SG6 692 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 NRBP1Q9UHY1 535 aa12.95□□□□□ -0.34
CHRNB3-201ENST00000289957 RBBP6Q7Z6E9 1792 aaKnown RBP12.94□□□□□ -0.34
CHRNB3-201ENST00000289957 SPDYE3A6NKU9 549 aa12.94□□□□□ -0.34
CHRNB3-201ENST00000289957 SPTLC2O15270 562 aa12.94□□□□□ -0.34
CHRNB3-201ENST00000289957 CRHR2Q13324 411 aa12.94□□□□□ -0.34
CHRNB3-201ENST00000289957 TAF1CQ15572 869 aaPredicted RBP12.94□□□□□ -0.34
CHRNB3-201ENST00000289957 AXDND1Q5T1B0 1012 aaPredicted RBP12.94□□□□□ -0.34
CHRNB3-201ENST00000289957 RIOX2Q8IUF8 465 aa12.94□□□□□ -0.34
CHRNB3-201ENST00000289957 PDCL2Q8N4E4 241 aa12.94□□□□□ -0.34
CHRNB3-201ENST00000289957 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 RASSF10A6NK89 507 aa12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 PP2D1A8MPX8 630 aa12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 TNNT1P13805 278 aa12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 VEGFBP49765 207 aa12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 OAZ1P54368 228 aa12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 NYAP1Q6ZVC0 841 aa12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 ACAD9Q9H845 621 aa12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 RABGAP1Q9Y3P9 1069 aa12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 ADGRA2Q96PE1 1338 aa12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 MANSC4A6NHS7 340 aaPredicted RBP12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 BECN2A8MW95 431 aa12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 CTGFP29279 349 aa12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 CCZ1BP86790 482 aa12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 CCZ1P86791 482 aaPredicted RBP12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 PABPC4Q13310 644 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 ANKRD35Q8N283 1001 aa12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 LENG9Q96B70 501 aa12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 FBXO2Q9UK22 296 aaPredicted RBP12.93□□□□□ -0.34
CHRNB3-201ENST00000289957 SREBF1P36956 1147 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 MRPS9P82933 396 aaKnown RBP12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 NCBP1Q09161 790 aaKnown RBP12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 PRR16Q569H4 304 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 MB21D1Q8N884 522 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 CCDC150Q8NCX0 1101 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 CCDC102AQ96A19 550 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms