RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 ICAM1P05362 532 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 POLR2MP0CAP2 368 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 PPP1R2P41236 205 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 GHRHRQ02643 423 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 STIM1Q13586 685 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 MCM6Q14566 821 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 NR1I3Q14994 352 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 ECM1Q16610 540 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 PRR16Q569H4 304 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 ANGEL2Q5VTE6 544 aaKnown RBP11.41□□□□□ -0.58
C9orf43-201ENST00000288462 LDHDQ86WU2 507 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 SCYL3Q8IZE3 742 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 ADD3Q9UEY8 706 aaKnown RBP11.41□□□□□ -0.58
C9orf43-201ENST00000288462 LIMA1Q9UHB6 759 aaKnown RBP11.41□□□□□ -0.58
C9orf43-201ENST00000288462 PPP2R3BQ9Y5P8 575 aa11.41□□□□□ -0.58
C9orf43-201ENST00000288462 LOC285556D6RIA3 1793 aa11.4□□□□□ -0.58
C9orf43-201ENST00000288462 PVALEFA0A1B0GWK0 134 aa11.4□□□□□ -0.58
C9orf43-201ENST00000288462 PSMA7O14818 248 aa11.4□□□□□ -0.58
C9orf43-201ENST00000288462 SKILP12757 684 aa11.4□□□□□ -0.58
C9orf43-201ENST00000288462 SFPQP23246 707 aaKnown RBP eCLIP11.4□□□□□ -0.58
C9orf43-201ENST00000288462 HOXA7P31268 230 aaPredicted RBP11.4□□□□□ -0.58
C9orf43-201ENST00000288462 KCNJ6P48051 423 aa11.4□□□□□ -0.58
C9orf43-201ENST00000288462 SPAG1Q07617 926 aa11.4□□□□□ -0.58
C9orf43-201ENST00000288462 PDE4DQ08499 809 aa11.4□□□□□ -0.58
C9orf43-201ENST00000288462 UNC13DQ70J99 1090 aa11.4□□□□□ -0.58
C9orf43-201ENST00000288462 PRPF38AQ8NAV1 312 aaKnown RBP11.4□□□□□ -0.58
C9orf43-201ENST00000288462 DHTKD1Q96HY7 919 aaPredicted RBP11.4□□□□□ -0.58
C9orf43-201ENST00000288462 CTAGE1Q96RT6 745 aa11.4□□□□□ -0.58
C9orf43-201ENST00000288462 WDR18Q9BV38 432 aa11.4□□□□□ -0.58
C9orf43-201ENST00000288462 LRRC27Q9C0I9 530 aa11.4□□□□□ -0.58
C9orf43-201ENST00000288462 SPON1Q9HCB6 807 aa11.4□□□□□ -0.58
C9orf43-201ENST00000288462 KCND1Q9NSA2 647 aa11.4□□□□□ -0.58
C9orf43-201ENST00000288462 OTOFQ9HC10 1997 aa11.4□□□□□ -0.58
C9orf43-201ENST00000288462 COL11A1P12107 1806 aaPredicted RBP11.4□□□□□ -0.58
C9orf43-201ENST00000288462 MSH4O15457 936 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 CFBP00751 764 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 CCT6AP40227 531 aaKnown RBP11.39□□□□□ -0.59
C9orf43-201ENST00000288462 PBX1P40424 430 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 HSD17B4P51659 736 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 EHHADHQ08426 723 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 SPECC1LQ69YQ0 1117 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 TTI2Q6NXR4 508 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 TBC1D5Q92609 795 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 EHMT1Q9H9B1 1298 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 VAV3Q9UKW4 847 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 MAPK8IP1Q9UQF2 711 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 VCAM1P19320 739 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 USP14P54578 494 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 MTMR2Q13614 643 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 TPD52L1Q16890 204 aaPredicted RBP11.39□□□□□ -0.59
C9orf43-201ENST00000288462 HAUS3Q68CZ6 603 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 FCHSD1Q86WN1 690 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 KIAA0895Q8NCT3 520 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 THAP9Q9H5L6 903 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 SLC38A10Q9HBR0 1119 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 EMILIN3Q9NT22 766 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 GGA3Q9NZ52 723 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 CCPG1Q9ULG6 757 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 STK24Q9Y6E0 443 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 RPTORQ8N122 1335 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 PITPNM2Q9BZ72 1349 aa11.39□□□□□ -0.59
C9orf43-201ENST00000288462 POTEB3A0JP26 581 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 TRIM49BA6NDI0 452 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 LRRC10BA6NIK2 292 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 POTECB2RU33 542 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 CCNE1P24864 410 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 STAT3P40763 770 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 PMS1P54277 932 aaKnown RBP11.38□□□□□ -0.59
C9orf43-201ENST00000288462 STK4Q13043 487 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 DGKZQ13574 1117 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 KRT31Q15323 416 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 TCP11X2Q5H9J9 407 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 POTEBQ6S5H4 581 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 ARHGAP27Q6ZUM4 889 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 CCDC112Q8NEF3 446 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 NOC3LQ8WTT2 800 aaKnown RBP11.38□□□□□ -0.59
C9orf43-201ENST00000288462 CLEC4DQ8WXI8 215 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 PPP1R9AQ9ULJ8 1098 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 POLR2AP24928 1970 aaKnown RBP11.38□□□□□ -0.59
C9orf43-201ENST00000288462 PTPRFP10586 1907 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 LOXHD1Q8IVV2 1947 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 COBLO75128 1261 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 MED24O75448 989 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 FCER1AP12319 257 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 HIRAP54198 1017 aaPredicted RBP11.38□□□□□ -0.59
C9orf43-201ENST00000288462 PTPN21Q16825 1174 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 IRF2BP1Q8IU81 584 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 CYP2W1Q8TAV3 490 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 DDX12PQ92771 950 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 P2RX5Q93086 422 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 DNAJC19Q96DA6 116 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 C12orf42Q96LP6 360 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 AGBL1Q96MI9 1066 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 WRNIP1Q96S55 665 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 TMX1Q9H3N1 280 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 AS3MTQ9HBK9 375 aa11.38□□□□□ -0.59
C9orf43-201ENST00000288462 FRMPD4Q14CM0 1322 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 ITIH6Q6UXX5 1313 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 BICDL2A1A5D9 508 aa11.37□□□□□ -0.59
C9orf43-201ENST00000288462 KCNJ18B7U540 433 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms