RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 RPL13P26373 211 aaKnown RBP13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 SLC8A1P32418 973 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 PRPHP41219 470 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 VPS52Q8N1B4 723 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 SMIM24O75264 130 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 EEF2P13639 858 aaKnown RBP13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 ADAM9Q13443 819 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 LLGL1Q15334 1064 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 CFAP221Q4G0U5 840 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 CLEC10AQ8IUN9 316 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 MORC2Q9Y6X9 1032 aaPredicted RBP13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 FTCDO95954 541 aa13.77□□□□□ -0.2
SLC6A1-201ENST00000287766 FCER1AP12319 257 aa13.77□□□□□ -0.2
SLC6A1-201ENST00000287766 CCNE1P24864 410 aa13.77□□□□□ -0.2
SLC6A1-201ENST00000287766 CTNNA1P35221 906 aaKnown RBP13.77□□□□□ -0.2
SLC6A1-201ENST00000287766 WDR78Q5VTH9 848 aa13.77□□□□□ -0.2
SLC6A1-201ENST00000287766 MCTP2Q6DN12 878 aa13.77□□□□□ -0.2
SLC6A1-201ENST00000287766 KRT26Q7Z3Y9 468 aa13.77□□□□□ -0.2
SLC6A1-201ENST00000287766 ANKRD42Q8N9B4 389 aa13.77□□□□□ -0.2
SLC6A1-201ENST00000287766 USP21Q9UK80 565 aa13.77□□□□□ -0.2
SLC6A1-201ENST00000287766 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.77□□□□□ -0.21
SLC6A1-201ENST00000287766 USP17L5A8MUK1 530 aa13.77□□□□□ -0.21
SLC6A1-201ENST00000287766 PSMC4P43686 418 aa13.77□□□□□ -0.21
SLC6A1-201ENST00000287766 CYP2J2P51589 502 aa13.77□□□□□ -0.21
SLC6A1-201ENST00000287766 CASP8Q14790 479 aa13.77□□□□□ -0.21
SLC6A1-201ENST00000287766 RPS6KA1Q15418 735 aa13.77□□□□□ -0.21
SLC6A1-201ENST00000287766 UAP1Q16222 522 aaPredicted RBP13.77□□□□□ -0.21
SLC6A1-201ENST00000287766 TMCO4Q5TGY1 634 aa13.77□□□□□ -0.21
SLC6A1-201ENST00000287766 HAUS3Q68CZ6 603 aa13.77□□□□□ -0.21
SLC6A1-201ENST00000287766 OGFOD1Q8N543 542 aa13.77□□□□□ -0.21
SLC6A1-201ENST00000287766 UHMK1Q8TAS1 419 aaKnown RBP13.77□□□□□ -0.21
SLC6A1-201ENST00000287766 ANKRD26Q9UPS8 1709 aa13.77□□□□□ -0.21
SLC6A1-201ENST00000287766 MUM1Q2TAK8 710 aa13.77□□□□□ -0.21
SLC6A1-201ENST00000287766 ACTN4O43707 911 aaKnown RBP13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 SETSIPP0DME0 302 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 PSMD6Q15008 389 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 U2AF1L4Q8WU68 220 aaKnown RBP13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 DHTKD1Q96HY7 919 aaPredicted RBP13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 MAP3K14Q99558 947 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 EHMT1Q9H9B1 1298 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 ATP8B1O43520 1251 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 MAGEA9P43362 315 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 GUCY2DQ02846 1103 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 ITPK1Q13572 414 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 NTRK3Q16288 839 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 ADGRA1Q86SQ6 560 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 DDX12PQ92771 950 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 XDHP47989 1333 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 PNPLA7Q6ZV29 1317 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 KIF3CO14782 793 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 SEMA3EO15041 775 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 SF3B2Q13435 895 aaKnown RBP13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 MMS22LQ6ZRQ5 1243 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 RNF168Q8IYW5 571 aaPredicted RBP13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 TTC16Q8NEE8 873 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 NSUN4Q96CB9 384 aaKnown RBP13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 VCX3BQ9H321 246 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 UTP11Q9Y3A2 253 aaKnown RBP13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 EIF3CLB5ME19 914 aaKnown RBP13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 CD44P16070 742 aaKnown RBP13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 ATP2C1P98194 919 aaPredicted RBP13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 PEX26Q7Z412 305 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 DGKHQ86XP1 1220 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 PSMD1Q99460 953 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 EIF3CQ99613 913 aaKnown RBP13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 PHF20Q9BVI0 1012 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 SUGCTQ9HAC7 445 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 ARMCX3Q9UH62 379 aaPredicted RBP13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 HYOU1Q9Y4L1 999 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 MRFAP1Q9Y605 127 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 USH1CQ9Y6N9 552 aa13.76□□□□□ -0.21
SLC6A1-201ENST00000287766 TNFAIP3P21580 790 aa13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 PARP3Q9Y6F1 533 aa13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 EARS2Q5JPH6 523 aaKnown RBP13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 TBC1D22AQ8WUA7 517 aa13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 CEP95Q96GE4 821 aa13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 NDST4Q9H3R1 872 aa13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 MTUS1Q9ULD2 1270 aa13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 FRMD4BQ9Y2L6 1034 aa13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 CLIC2O15247 247 aa13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 EXOC3O60645 756 aa13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 CIB2O75838 187 aa13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 ZBED6P86452 979 aa13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 KIFC2Q96AC6 838 aa13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 DBNDD1Q9H9R9 158 aa13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 MLXIPQ9HAP2 919 aa13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 ADD3Q9UEY8 706 aaKnown RBP13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 FAM184BQ9ULE4 1060 aa13.75□□□□□ -0.21
SLC6A1-201ENST00000287766 GDF11O95390 407 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 XRCC5P13010 732 aaKnown RBP13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 FERP16591 822 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 NR1I3Q14994 352 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 ARL6IP4Q66PJ3 421 aaKnown RBP13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 GALNT17Q6IS24 598 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 REXO1L1PQ8IX06 675 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 TEKT1Q969V4 418 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 HPSEQ9Y251 543 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 A0A1B0GTH6 734 aa13.74□□□□□ -0.21
SLC6A1-201ENST00000287766 LRRD1A4D1F6 860 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms