RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 BRI3BPQ8WY22 251 aa15.01□□□□□ -0.01
ACER3-201ENST00000278544 PORCNQ9H237 461 aa15.01□□□□□ -0.01
ACER3-201ENST00000278544 ZHX3Q9H4I2 956 aa15.01□□□□□ -0.01
ACER3-201ENST00000278544 KIAA1468Q9P260 1216 aa15.01□□□□□ -0.01
ACER3-201ENST00000278544 SYNPO2Q9UMS6 1093 aa15.01□□□□□ -0.01
ACER3-201ENST00000278544 BTBD19C9JJ37 291 aa15□□□□□ -0.01
ACER3-201ENST00000278544 MSH4O15457 936 aa15□□□□□ -0.01
ACER3-201ENST00000278544 BMP15O95972 392 aa15□□□□□ -0.01
ACER3-201ENST00000278544 CUL4BQ13620 913 aa15□□□□□ -0.01
ACER3-201ENST00000278544 TELO2Q9Y4R8 837 aa15□□□□□ -0.01
ACER3-201ENST00000278544 POTEB3A0JP26 581 aa15□□□□□ -0.01
ACER3-201ENST00000278544 PTPN21Q16825 1174 aa15□□□□□ -0.01
ACER3-201ENST00000278544 TMEM266Q2M3C6 531 aa15□□□□□ -0.01
ACER3-201ENST00000278544 POTEBQ6S5H4 581 aa15□□□□□ -0.01
ACER3-201ENST00000278544 KCNK18Q7Z418 384 aa15□□□□□ -0.01
ACER3-201ENST00000278544 GINM1Q9NU53 330 aa15□□□□□ -0.01
ACER3-201ENST00000278544 USP25Q9UHP3 1055 aa15□□□□□ -0.01
ACER3-201ENST00000278544 SREBF1P36956 1147 aa15□□□□□ -0.01
ACER3-201ENST00000278544 CCT6AP40227 531 aaKnown RBP15□□□□□ -0.01
ACER3-201ENST00000278544 POSTNQ15063 836 aa15□□□□□ -0.01
ACER3-201ENST00000278544 SPATC1LQ9H0A9 340 aa15□□□□□ -0.01
ACER3-201ENST00000278544 POTEFA5A3E0 1075 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 ACTN4O43707 911 aaKnown RBP14.99□□□□□ -0.01
ACER3-201ENST00000278544 ITGB5P18084 799 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 ZNF165P49910 485 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 STX17P56962 302 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 AP3B2Q13367 1082 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 POTEGQ6S5H5 508 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 REPS2Q8NFH8 660 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 C12orf42Q96LP6 360 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 MTMR9Q96QG7 549 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 MOV10L1Q9BXT6 1211 aaKnown RBP14.99□□□□□ -0.01
ACER3-201ENST00000278544 AGTPBP1Q9UPW5 1226 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 TRMT44Q8IYL2 757 aaKnown RBP14.99□□□□□ -0.01
ACER3-201ENST00000278544 PAGE5Q96GU1 130 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 RBPJLQ9UBG7 517 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 KIAA1024Q9UPX6 916 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 E9PMD0 336 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 FOSP01100 380 aaPredicted RBP14.99□□□□□ -0.01
ACER3-201ENST00000278544 CTTNQ14247 550 aaKnown RBP14.99□□□□□ -0.01
ACER3-201ENST00000278544 MCM6Q14566 821 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 SEPT14Q6ZU15 432 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 PIGOQ8TEQ8 1089 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 LENG9Q96B70 501 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 MTRQ99707 1265 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 PTPN18Q99952 460 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 CPA4Q9UI42 421 aa14.99□□□□□ -0.01
ACER3-201ENST00000278544 CXCL11O14625 94 aa14.98□□□□□ -0.01
ACER3-201ENST00000278544 IDEP14735 1019 aa14.98□□□□□ -0.01
ACER3-201ENST00000278544 MRPS9P82933 396 aaKnown RBP14.98□□□□□ -0.01
ACER3-201ENST00000278544 CEP55Q53EZ4 464 aa14.98□□□□□ -0.01
ACER3-201ENST00000278544 GPAT2Q6NUI2 795 aa14.98□□□□□ -0.01
ACER3-201ENST00000278544 MAEAQ7L5Y9 396 aa14.98□□□□□ -0.01
ACER3-201ENST00000278544 ZNF577Q9BSK1 485 aa14.98□□□□□ -0.01
ACER3-201ENST00000278544 MMTAG2Q9BU76 263 aaKnown RBP14.98□□□□□ -0.01
ACER3-201ENST00000278544 ACAD9Q9H845 621 aa14.98□□□□□ -0.01
ACER3-201ENST00000278544 EML1O00423 815 aa14.98□□□□□ -0.01
ACER3-201ENST00000278544 PLA2G6O60733 806 aa14.98□□□□□ -0.01
ACER3-201ENST00000278544 ATP9AO75110 1047 aa14.98□□□□□ -0.01
ACER3-201ENST00000278544 LONP1P36776 959 aaKnown RBP14.98□□□□□ -0.01
ACER3-201ENST00000278544 SH3D19Q5HYK7 790 aa14.98□□□□□ -0.01
ACER3-201ENST00000278544 LRCH2Q5VUJ6 765 aa14.98□□□□□ -0.01
ACER3-201ENST00000278544 LBX2Q6XYB7 198 aa14.98□□□□□ -0.01
ACER3-201ENST00000278544 IQUBQ8NA54 791 aa14.98□□□□□ -0.01
ACER3-201ENST00000278544 DISC1Q9NRI5 854 aa14.98□□□□□ -0.01
ACER3-201ENST00000278544 OTOFQ9HC10 1997 aa14.98□□□□□ -0.01
ACER3-201ENST00000278544 FSD2A1L4K1 749 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 MOGSQ13724 837 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 KRT79Q5XKE5 535 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 ARL6IP4Q66PJ3 421 aaKnown RBP14.97□□□□□ -0.01
ACER3-201ENST00000278544 MCF2L2Q86YR7 1114 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 TPH2Q8IWU9 490 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 AOPEPQ8N6M6 819 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 GLT8D2Q9H1C3 349 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 CBX8Q9HC52 389 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 TBC1D7Q9P0N9 293 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 NPHP3-ACAD11A0A0J9YXS1 232 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 GAS7O60861 476 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 USP11P51784 963 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 PSMC6P62333 389 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 PPP4R3AQ6IN85 833 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 KCNH7Q9NS40 1196 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 CYP39A1Q9NYL5 469 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 HTTP42858 3142 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 TMEM150BA6NC51 233 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 NAALADL2Q58DX5 795 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 ZNF579Q8NAF0 562 aaKnown RBP14.97□□□□□ -0.01
ACER3-201ENST00000278544 SMARCE1Q969G3 411 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 MS4A4AQ96JQ5 239 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 FUCA2Q9BTY2 467 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 SCN4AP35499 1836 aa14.97□□□□□ -0.01
ACER3-201ENST00000278544 NR3C2P08235 984 aa14.96□□□□□ -0.01
ACER3-201ENST00000278544 PABPC4Q13310 644 aaKnown RBP eCLIP14.96□□□□□ -0.01
ACER3-201ENST00000278544 SPRYD7Q5W111 196 aa14.96□□□□□ -0.01
ACER3-201ENST00000278544 FASTKD5Q7L8L6 764 aaKnown RBP14.96□□□□□ -0.01
ACER3-201ENST00000278544 BANK1Q8NDB2 785 aa14.96□□□□□ -0.01
ACER3-201ENST00000278544 CALML4Q96GE6 196 aa14.96□□□□□ -0.01
ACER3-201ENST00000278544 PDCD2LQ9BRP1 358 aa14.96□□□□□ -0.01
ACER3-201ENST00000278544 KCNH4Q9UQ05 1017 aa14.96□□□□□ -0.01
ACER3-201ENST00000278544 COL11A1P12107 1806 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms