RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 MAP3K20Q9NYL2 800 aaKnown RBP16.7■□□□□ 0.26
HMGN3-201ENST00000275036 SLC12A7Q9Y666 1083 aa16.7■□□□□ 0.26
HMGN3-201ENST00000275036 ACRP10323 421 aa16.69■□□□□ 0.26
HMGN3-201ENST00000275036 CPA1P15085 419 aa16.69■□□□□ 0.26
HMGN3-201ENST00000275036 TTLL4Q14679 1199 aa16.69■□□□□ 0.26
HMGN3-201ENST00000275036 STXBP2Q15833 593 aa16.69■□□□□ 0.26
HMGN3-201ENST00000275036 APOA5Q6Q788 366 aa16.69■□□□□ 0.26
HMGN3-201ENST00000275036 MICU3Q86XE3 530 aa16.69■□□□□ 0.26
HMGN3-201ENST00000275036 FANCBQ8NB91 859 aa16.69■□□□□ 0.26
HMGN3-201ENST00000275036 RRP36Q96EU6 259 aaKnown RBP16.69■□□□□ 0.26
HMGN3-201ENST00000275036 PDCD2LQ9BRP1 358 aa16.69■□□□□ 0.26
HMGN3-201ENST00000275036 NOC4LQ9BVI4 516 aaKnown RBP16.69■□□□□ 0.26
HMGN3-201ENST00000275036 WNT8AQ9H1J5 351 aa16.69■□□□□ 0.26
HMGN3-201ENST00000275036 POLR3EQ9NVU0 708 aa16.69■□□□□ 0.26
HMGN3-201ENST00000275036 BRPF3Q9ULD4 1205 aa16.69■□□□□ 0.26
HMGN3-201ENST00000275036 hCG_1642624A0A1W2PR95 340 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 GCOM1H8Y6P7 765 aaPredicted RBP16.68■□□□□ 0.26
HMGN3-201ENST00000275036 POLR2MP0CAP2 368 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 CALM1P0DP23 149 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 CALM2P0DP24 149 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 CALM3P0DP25 149 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 HSPA4P34932 840 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 GNAQP50148 359 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 SMAD3P84022 425 aaKnown RBP16.68■□□□□ 0.26
HMGN3-201ENST00000275036 TRAF1Q13077 416 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 PGM5Q15124 567 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 NBPF20Q3BBV1 942 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 TMEM240Q5SV17 173 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 TMTC3Q6ZXV5 915 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 FCHSD1Q86WN1 690 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 SAMD3Q8N6K7 520 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 AFG1LQ8WV93 481 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 ZFP91Q96JP5 570 aaPredicted RBP16.68■□□□□ 0.26
HMGN3-201ENST00000275036 LZTS2Q9BRK4 669 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 MTG1Q9BT17 334 aaPredicted RBP16.68■□□□□ 0.26
HMGN3-201ENST00000275036 TTYH1Q9H313 450 aaPredicted RBP16.68■□□□□ 0.26
HMGN3-201ENST00000275036 HIPK3Q9H422 1215 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 DDX41Q9UJV9 622 aaKnown RBP16.68■□□□□ 0.26
HMGN3-201ENST00000275036 SNX14Q9Y5W7 946 aa16.68■□□□□ 0.26
HMGN3-201ENST00000275036 RBAK-RBAKDNI3L0D1 243 aa16.67■□□□□ 0.26
HMGN3-201ENST00000275036 EIF3JO75822 258 aaKnown RBP16.67■□□□□ 0.26
HMGN3-201ENST00000275036 MMP3P08254 477 aa16.67■□□□□ 0.26
HMGN3-201ENST00000275036 CYP2C9P11712 490 aa16.67■□□□□ 0.26
HMGN3-201ENST00000275036 MYCLP12524 364 aaPredicted RBP16.67■□□□□ 0.26
HMGN3-201ENST00000275036 CCL23P55773 120 aa16.67■□□□□ 0.26
HMGN3-201ENST00000275036 KRT32Q14532 448 aa16.67■□□□□ 0.26
HMGN3-201ENST00000275036 RASIP1Q5U651 963 aa16.67■□□□□ 0.26
HMGN3-201ENST00000275036 CCDC82Q8N4S0 544 aa16.67■□□□□ 0.26
HMGN3-201ENST00000275036 GPKOWQ92917 476 aaPredicted RBP eCLIP16.67■□□□□ 0.26
HMGN3-201ENST00000275036 TRIP12Q14669 1992 aaPredicted RBP16.67■□□□□ 0.26
HMGN3-201ENST00000275036 EYSQ5T1H1 3165 aa16.66■□□□□ 0.26
HMGN3-201ENST00000275036 GH1P01241 217 aa16.66■□□□□ 0.26
HMGN3-201ENST00000275036 PPIGQ13427 754 aaKnown RBP eCLIP16.66■□□□□ 0.261e-8■■□□□ 12.2
HMGN3-201ENST00000275036 USP17L6PQ6QN14 398 aa16.66■□□□□ 0.26
HMGN3-201ENST00000275036 ZNF365Q70YC5 407 aa16.66■□□□□ 0.26
HMGN3-201ENST00000275036 VSIG10LQ86VR7 867 aa16.66■□□□□ 0.26
HMGN3-201ENST00000275036 TMEM199Q8N511 208 aa16.66■□□□□ 0.26
HMGN3-201ENST00000275036 KAT2BQ92831 832 aa16.66■□□□□ 0.26
HMGN3-201ENST00000275036 SCLYQ96I15 445 aa16.66■□□□□ 0.26
HMGN3-201ENST00000275036 JAKMIP1Q96N16 626 aaKnown RBP16.66■□□□□ 0.26
HMGN3-201ENST00000275036 SEZ6LQ9BYH1 1024 aa16.66■□□□□ 0.26
HMGN3-201ENST00000275036 SEC63Q9UGP8 760 aaKnown RBP16.66■□□□□ 0.26
HMGN3-201ENST00000275036 STXBP5LQ9Y2K9 1186 aa16.66■□□□□ 0.26
HMGN3-201ENST00000275036 FRMPD4Q14CM0 1322 aa16.66■□□□□ 0.26
HMGN3-201ENST00000275036 CNTNAP5Q8WYK1 1306 aa16.66■□□□□ 0.26
HMGN3-201ENST00000275036 GRXCR1A8MXD5 290 aa16.65■□□□□ 0.26
HMGN3-201ENST00000275036 MEIS2O14770 477 aa16.65■□□□□ 0.26
HMGN3-201ENST00000275036 FUT2Q10981 343 aa16.65■□□□□ 0.26
HMGN3-201ENST00000275036 ZNF697Q5TEC3 545 aa16.65■□□□□ 0.26
HMGN3-201ENST00000275036 ERICH6BQ5W0A0 696 aa16.65■□□□□ 0.26
HMGN3-201ENST00000275036 CTAGE1Q96RT6 745 aa16.65■□□□□ 0.26
HMGN3-201ENST00000275036 SEMA6BQ9H3T3 888 aa16.65■□□□□ 0.26
HMGN3-201ENST00000275036 IL23AQ9NPF7 189 aa16.65■□□□□ 0.26
HMGN3-201ENST00000275036 FAM217BQ9NTX9 383 aaPredicted RBP16.65■□□□□ 0.26
HMGN3-201ENST00000275036 CXXC1Q9P0U4 656 aaPredicted RBP16.65■□□□□ 0.26
HMGN3-201ENST00000275036 SCN5AQ14524 2016 aa16.65■□□□□ 0.26
HMGN3-201ENST00000275036 TANC1Q9C0D5 1861 aa16.65■□□□□ 0.26
HMGN3-201ENST00000275036 KLF18A0A0U1RQI7 1052 aa16.64■□□□□ 0.25
HMGN3-201ENST00000275036 ZBTB43O43298 467 aa16.64■□□□□ 0.25
HMGN3-201ENST00000275036 SORBS3O60504 671 aa16.64■□□□□ 0.25
HMGN3-201ENST00000275036 REC8O95072 547 aa16.64■□□□□ 0.25
HMGN3-201ENST00000275036 HMGB1P09429 215 aaKnown RBP16.64■□□□□ 0.25
HMGN3-201ENST00000275036 MRPS9P82933 396 aaKnown RBP16.64■□□□□ 0.25
HMGN3-201ENST00000275036 SP2Q02086 613 aa16.64■□□□□ 0.25
HMGN3-201ENST00000275036 NFRKBQ6P4R8 1299 aa16.64■□□□□ 0.25
HMGN3-201ENST00000275036 EMID1Q96A84 441 aaPredicted RBP16.64■□□□□ 0.25
HMGN3-201ENST00000275036 BCAS3Q9H6U6 928 aa16.64■□□□□ 0.25
HMGN3-201ENST00000275036 MRVI1Q9Y6F6 885 aa16.64■□□□□ 0.25
HMGN3-201ENST00000275036 GBF1Q92538 1859 aa16.63■□□□□ 0.25
HMGN3-201ENST00000275036 PIK3CDO00329 1044 aa16.63■□□□□ 0.25
HMGN3-201ENST00000275036 CDC27P30260 824 aa16.63■□□□□ 0.25
HMGN3-201ENST00000275036 CCND2P30279 289 aa16.63■□□□□ 0.25
HMGN3-201ENST00000275036 PBX2P40425 430 aa16.63■□□□□ 0.25
HMGN3-201ENST00000275036 APOBRQ0VD83 1088 aa16.63■□□□□ 0.25
HMGN3-201ENST00000275036 RTN1Q16799 776 aa16.63■□□□□ 0.25
HMGN3-201ENST00000275036 BRDTQ58F21 947 aaPredicted RBP16.63■□□□□ 0.25
HMGN3-201ENST00000275036 FAM47CQ5HY64 1035 aa16.63■□□□□ 0.25
HMGN3-201ENST00000275036 PSRC1Q6PGN9 363 aaPredicted RBP16.63■□□□□ 0.25
HMGN3-201ENST00000275036 SYNE3Q6ZMZ3 975 aa16.63■□□□□ 0.25
HMGN3-201ENST00000275036 Q6ZUG5 572 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms