RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CHADLQ6NUI6 762 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 KIRREL3Q8IZU9 778 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 NOC3LQ8WTT2 800 aaKnown RBP14.26□□□□□ -0.13
COL8A1-202ENST00000273342 SCLT1Q96NL6 688 aa14.26□□□□□ -0.13
COL8A1-202ENST00000273342 BIN2Q9UBW5 565 aaPredicted RBP14.26□□□□□ -0.13
COL8A1-202ENST00000273342 CYTH3O43739 400 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 KIF5BP33176 963 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 RDXP35241 583 aaKnown RBP14.25□□□□□ -0.13
COL8A1-202ENST00000273342 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
COL8A1-202ENST00000273342 PAK2Q13177 524 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 E2F5Q15329 346 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 ZNF662Q6ZS27 426 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 CCDC114Q96M63 670 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 KCNK3O14649 394 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 MECOMQ03112 1051 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 RAPGEF1Q13905 1077 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 KIAA0753Q2KHM9 967 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 NELFCDQ8IXH7 590 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 CCDC13Q8IYE1 715 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 TRPM3Q9HCF6 1732 aaPredicted RBP14.25□□□□□ -0.13
COL8A1-202ENST00000273342 ZNF335Q9H4Z2 1342 aaPredicted RBP14.25□□□□□ -0.13
COL8A1-202ENST00000273342 PDHBP11177 359 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 MDH1P40925 334 aaKnown RBP14.25□□□□□ -0.13
COL8A1-202ENST00000273342 NAPAP54920 295 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 ZNF34Q8IZ26 560 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 CAVIN3Q969G5 261 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 TRIM31Q9BZY9 425 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 IL17RBQ9NRM6 502 aa14.25□□□□□ -0.13
COL8A1-202ENST00000273342 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.25□□□□□ -0.13
COL8A1-202ENST00000273342 GOLGA6L7A0A1B0GV03 622 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 MYMKA6NI61 221 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 EPB41P11171 864 aaKnown RBP14.24□□□□□ -0.13
COL8A1-202ENST00000273342 ATP6V1AP38606 617 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 CCDC40Q4G0X9 1142 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 C3orf67Q6ZVT6 689 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 UBLCP1Q8WVY7 318 aaPredicted RBP14.24□□□□□ -0.13
COL8A1-202ENST00000273342 ATP6V1G3Q96LB4 118 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 MKNK2Q9HBH9 465 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 TMEM260Q9NX78 707 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 POTEMA6NI47 508 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 GOLGA6L10A6NI86 522 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 OR52Z1P0C646 297 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 QPCTQ16769 361 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 CAVIN4Q5BKX8 364 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 KDM7AQ6ZMT4 941 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 ZSCAN29Q8IWY8 852 aaPredicted RBP14.24□□□□□ -0.13
COL8A1-202ENST00000273342 CCSER1Q9C0I3 900 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 KLC4Q9NSK0 619 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 FLT1P17948 1338 aa14.24□□□□□ -0.13
COL8A1-202ENST00000273342 DCDC2CA8MYV0 355 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 TRAF5O00463 557 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 CNNM4Q6P4Q7 775 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 FAM133AQ8N9E0 248 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 GIMAP7Q8NHV1 300 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 BAP1Q92560 729 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 CDK5RAP3Q96JB5 506 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 BRIP1Q9BX63 1249 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 LRRC4CQ9HCJ2 640 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 A0A087X0T9 212 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 CEP104O60308 925 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 TLR2O60603 784 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 FAM228BP0C875 321 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 FLT3P36888 993 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 ZKSCAN4Q969J2 545 aaPredicted RBP14.23□□□□□ -0.13
COL8A1-202ENST00000273342 NUDT12Q9BQG2 462 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 LSM14BQ9BX40 385 aaKnown RBP14.23□□□□□ -0.13
COL8A1-202ENST00000273342 ZHX3Q9H4I2 956 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 SAP30BPQ9UHR5 308 aaKnown RBP14.23□□□□□ -0.13
COL8A1-202ENST00000273342 A0A1W2PQJ5 194 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 TMCO5BA8MYB1 307 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 CTNNA1P35221 906 aaKnown RBP14.23□□□□□ -0.13
COL8A1-202ENST00000273342 CDR1P51861 262 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 MAN2A1Q16706 1144 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 PDXDC1Q6P996 788 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 AEBP2Q6ZN18 517 aaPredicted RBP14.23□□□□□ -0.13
COL8A1-202ENST00000273342 CCDC121Q6ZUS5 278 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 SV2BQ7L1I2 683 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 ADAT2Q7Z6V5 191 aaKnown RBP14.23□□□□□ -0.13
COL8A1-202ENST00000273342 DDX47Q9H0S4 455 aaKnown RBP14.23□□□□□ -0.13
COL8A1-202ENST00000273342 GDF3Q9NR23 364 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 HAUS2Q9NVX0 235 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.23□□□□□ -0.13
COL8A1-202ENST00000273342 DISP2A7MBM2 1401 aa14.23□□□□□ -0.13
COL8A1-202ENST00000273342 PRLRP16471 622 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 KCNMA1Q12791 1236 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 HGSNATQ68CP4 663 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 MICALCLQ6ZW33 695 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 TBCKQ8TEA7 893 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 CYFIP2Q96F07 1278 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 CALML4Q96GE6 196 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 FAM84BQ96KN1 310 aaPredicted RBP14.22□□□□□ -0.13
COL8A1-202ENST00000273342 MMTAG2Q9BU76 263 aaKnown RBP14.22□□□□□ -0.13
COL8A1-202ENST00000273342 CARD10Q9BWT7 1032 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 CRNKL1Q9BZJ0 848 aaKnown RBP14.22□□□□□ -0.13
COL8A1-202ENST00000273342 UBA5Q9GZZ9 404 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 SLC40A1Q9NP59 571 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 SMCO2A6NFE2 343 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 SMIM23A6NLE4 172 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 PHF20L1A8MW92 1017 aa14.22□□□□□ -0.13
COL8A1-202ENST00000273342 OPLAHO14841 1288 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms