RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 FOSP01100 380 aaPredicted RBP14.6□□□□□ -0.07
SS18-202ENST00000269138 AKR1A1P14550 325 aa14.6□□□□□ -0.07
SS18-202ENST00000269138 SMPD1P17405 629 aa14.6□□□□□ -0.07
SS18-202ENST00000269138 XBP1P17861 261 aa14.6□□□□□ -0.07
SS18-202ENST00000269138 AP3B2Q13367 1082 aa14.6□□□□□ -0.07
SS18-202ENST00000269138 GJC2Q5T442 439 aaPredicted RBP14.6□□□□□ -0.07
SS18-202ENST00000269138 KRT40Q6A162 431 aa14.6□□□□□ -0.07
SS18-202ENST00000269138 TEX2Q8IWB9 1127 aa14.6□□□□□ -0.07
SS18-202ENST00000269138 DAGLBQ8NCG7 672 aa14.6□□□□□ -0.07
SS18-202ENST00000269138 BICD2Q8TD16 824 aa14.6□□□□□ -0.07
SS18-202ENST00000269138 ARIH2O95376 493 aa14.59□□□□□ -0.07
SS18-202ENST00000269138 TFRCP02786 760 aaKnown RBP14.59□□□□□ -0.07
SS18-202ENST00000269138 GJA8P48165 433 aa14.59□□□□□ -0.07
SS18-202ENST00000269138 IRX5P78411 483 aaPredicted RBP14.59□□□□□ -0.07
SS18-202ENST00000269138 TNFAIP2Q03169 654 aa14.59□□□□□ -0.07
SS18-202ENST00000269138 PCNX4Q63HM2 1172 aa14.59□□□□□ -0.07
SS18-202ENST00000269138 IQSEC1Q6DN90 963 aa14.59□□□□□ -0.07
SS18-202ENST00000269138 FAM177A1Q8N128 213 aaPredicted RBP14.59□□□□□ -0.07
SS18-202ENST00000269138 FAM184AQ8NB25 1140 aa14.59□□□□□ -0.07
SS18-202ENST00000269138 WDR11Q9BZH6 1224 aa14.59□□□□□ -0.07
SS18-202ENST00000269138 CRISPLD2Q9H0B8 497 aa14.59□□□□□ -0.07
SS18-202ENST00000269138 LRRC37A2A6NM11 1700 aa14.58□□□□□ -0.07
SS18-202ENST00000269138 EDIL3O43854 480 aa14.58□□□□□ -0.08
SS18-202ENST00000269138 CAPN15O75808 1086 aa14.58□□□□□ -0.08
SS18-202ENST00000269138 GJB2P29033 226 aa14.58□□□□□ -0.08
SS18-202ENST00000269138 SREBF1P36956 1147 aa14.58□□□□□ -0.08
SS18-202ENST00000269138 GALNT17Q6IS24 598 aa14.58□□□□□ -0.08
SS18-202ENST00000269138 COPS5Q92905 334 aa14.58□□□□□ -0.08
SS18-202ENST00000269138 C8orf76Q96K31 380 aa14.58□□□□□ -0.08
SS18-202ENST00000269138 FOXD4L1Q9NU39 408 aa14.58□□□□□ -0.08
SS18-202ENST00000269138 OGDHLQ9ULD0 1010 aa14.58□□□□□ -0.08
SS18-202ENST00000269138 SMC3Q9UQE7 1217 aa14.58□□□□□ -0.08
SS18-202ENST00000269138 KIAA0100Q14667 2235 aaKnown RBP14.58□□□□□ -0.08
SS18-202ENST00000269138 MSCO60682 206 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 PGK1P00558 417 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 MMP1P03956 469 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 RARBP10826 455 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 ITGB5P18084 799 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 ARHGAP4P98171 946 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 SEMA3FQ13275 785 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 NR5A1Q13285 461 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 TRIM29Q14134 588 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 LY6KQ17RY6 165 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 EARS2Q5JPH6 523 aaKnown RBP14.57□□□□□ -0.08
SS18-202ENST00000269138 XRRA1Q6P2D8 792 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 CCDC62Q6P9F0 684 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 HSCBQ8IWL3 235 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 CYP2W1Q8TAV3 490 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 SCFD2Q8WU76 684 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 CRYGNQ8WXF5 182 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 EHMT1Q9H9B1 1298 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 GNEQ9Y223 722 aaKnown RBP14.57□□□□□ -0.08
SS18-202ENST00000269138 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.57□□□□□ -0.08
SS18-202ENST00000269138 UBIAD1Q9Y5Z9 338 aa14.57□□□□□ -0.08
SS18-202ENST00000269138 FAM205CA6NFA0 338 aa14.56□□□□□ -0.08
SS18-202ENST00000269138 BTBD18B2RXH4 712 aa14.56□□□□□ -0.08
SS18-202ENST00000269138 DUSP11O75319 330 aaKnown RBP14.56□□□□□ -0.08
SS18-202ENST00000269138 TXNP10599 105 aaKnown RBP14.56□□□□□ -0.08
SS18-202ENST00000269138 KRT2P35908 639 aa14.56□□□□□ -0.08
SS18-202ENST00000269138 MNX1P50219 401 aaPredicted RBP14.56□□□□□ -0.08
SS18-202ENST00000269138 DUSP28Q4G0W2 176 aa14.56□□□□□ -0.08
SS18-202ENST00000269138 MCTP2Q6DN12 878 aa14.56□□□□□ -0.08
SS18-202ENST00000269138 FBXO18Q8NFZ0 1043 aa14.56□□□□□ -0.08
SS18-202ENST00000269138 TNFRSF25Q93038 417 aa14.56□□□□□ -0.08
SS18-202ENST00000269138 INPP4AQ96PE3 977 aaPredicted RBP14.56□□□□□ -0.08
SS18-202ENST00000269138 BCAS3Q9H6U6 928 aa14.56□□□□□ -0.08
SS18-202ENST00000269138 XPNPEP3Q9NQH7 507 aa14.56□□□□□ -0.08
SS18-202ENST00000269138 MRVI1Q9Y6F6 885 aa14.56□□□□□ -0.08
SS18-202ENST00000269138 MYADML2A6NDP7 307 aa14.56□□□□□ -0.08
SS18-202ENST00000269138 DYNC1LI2O43237 492 aaPredicted RBP14.56□□□□□ -0.08
SS18-202ENST00000269138 SORBS3O60504 671 aa14.56□□□□□ -0.08
SS18-202ENST00000269138 MYCNP04198 464 aaPredicted RBP14.56□□□□□ -0.08
SS18-202ENST00000269138 SP2Q02086 613 aa14.56□□□□□ -0.08
SS18-202ENST00000269138 TTLL4Q14679 1199 aa14.56□□□□□ -0.08
SS18-202ENST00000269138 DIS3L2Q8IYB7 885 aaKnown RBP14.56□□□□□ -0.08
SS18-202ENST00000269138 TBCKQ8TEA7 893 aa14.56□□□□□ -0.08
SS18-202ENST00000269138 DDX41Q9UJV9 622 aaKnown RBP14.56□□□□□ -0.08
SS18-202ENST00000269138 SYNRGQ9UMZ2 1314 aa14.55□□□□□ -0.08
SS18-202ENST00000269138 SPATA31C2B4DYI2 1134 aa14.55□□□□□ -0.08
SS18-202ENST00000269138 CTAGE5O15320 804 aa14.55□□□□□ -0.08
SS18-202ENST00000269138 ADAMTS4O75173 837 aa14.55□□□□□ -0.08
SS18-202ENST00000269138 STAM2O75886 525 aa14.55□□□□□ -0.08
SS18-202ENST00000269138 CYP3A4P08684 503 aa14.55□□□□□ -0.08
SS18-202ENST00000269138 LRRC41Q15345 812 aa14.55□□□□□ -0.08
SS18-202ENST00000269138 INF2Q27J81 1249 aa14.55□□□□□ -0.08
SS18-202ENST00000269138 PIK3AP1Q6ZUJ8 805 aa14.55□□□□□ -0.08
SS18-202ENST00000269138 KRT25Q7Z3Z0 450 aa14.55□□□□□ -0.08
SS18-202ENST00000269138 TLK2Q86UE8 772 aa14.55□□□□□ -0.08
SS18-202ENST00000269138 DIS3LQ8TF46 1054 aaKnown RBP14.55□□□□□ -0.08
SS18-202ENST00000269138 MXRA8Q9BRK3 442 aa14.55□□□□□ -0.08
SS18-202ENST00000269138 UPF3AQ9H1J1 476 aaKnown RBP14.55□□□□□ -0.08
SS18-202ENST00000269138 JADE2Q9NQC1 790 aa14.55□□□□□ -0.08
SS18-202ENST00000269138 CCDC194A0A1B0GVG4 234 aa14.54□□□□□ -0.08
SS18-202ENST00000269138 FAM86B1E9PN63 330 aa14.54□□□□□ -0.08
SS18-202ENST00000269138 ATP9AO75110 1047 aa14.54□□□□□ -0.08
SS18-202ENST00000269138 FAM86B2P0C5J1 330 aa14.54□□□□□ -0.08
SS18-202ENST00000269138 C6orf222P0C671 652 aaPredicted RBP14.54□□□□□ -0.08
SS18-202ENST00000269138 ARP10275 920 aa14.54□□□□□ -0.08
SS18-202ENST00000269138 ICAM3P32942 547 aa14.54□□□□□ -0.08
SS18-202ENST00000269138 ZNF76P36508 570 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms