RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 SOGA3Q5TF21 947 aa18.73■□□□□ 0.59
RTN1-201ENST00000267484 CLEC4GQ6UXB4 293 aa18.73■□□□□ 0.59
RTN1-201ENST00000267484 BAP1Q92560 729 aa18.73■□□□□ 0.59
RTN1-201ENST00000267484 HYOU1Q9Y4L1 999 aa18.73■□□□□ 0.59
RTN1-201ENST00000267484 SAMM50Q9Y512 469 aa18.73■□□□□ 0.59
RTN1-201ENST00000267484 EIF6P56537 245 aaKnown RBP18.72■□□□□ 0.59
RTN1-201ENST00000267484 PTPROQ16827 1216 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 CLEC10AQ8IUN9 316 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 AMOTL1Q8IY63 956 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 CDK5RAP3Q96JB5 506 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 EYA3Q99504 573 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 MYH1P12882 1939 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 USP17L5A8MUK1 530 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 FTCDO95954 541 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 NOP2P46087 812 aaKnown RBP18.72■□□□□ 0.59
RTN1-201ENST00000267484 ATP1A2P50993 1020 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 TRADDQ15628 312 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 MAN2A1Q16706 1144 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 TTMPQ5BVD1 217 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 GALNT17Q6IS24 598 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 CERS3Q8IU89 383 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 LARP4BQ92615 738 aaKnown RBP18.72■□□□□ 0.59
RTN1-201ENST00000267484 ALS2CR12Q96Q35 445 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 KRT14P02533 472 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 FAM153BP0C7A2 387 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 CACNB1Q02641 598 aaPredicted RBP18.72■□□□□ 0.59
RTN1-201ENST00000267484 CALCRLQ16602 461 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 FAM153CQ494X1 144 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 DNAAF5Q86Y56 855 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 REXO1Q8N1G1 1221 aaKnown RBP18.72■□□□□ 0.59
RTN1-201ENST00000267484 BCAS4Q8TDM0 211 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 IFT81Q8WYA0 676 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 CAPS2Q9BXY5 557 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 FGFBP2Q9BYJ0 223 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 STIM2Q9P246 746 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 FAM153AQ9UHL3 310 aa18.72■□□□□ 0.59
RTN1-201ENST00000267484 SSBP05455 408 aaKnown RBP eCLIP18.71■□□□□ 0.59
RTN1-201ENST00000267484 HNRNPH3P31942 346 aaKnown RBP18.71■□□□□ 0.59
RTN1-201ENST00000267484 KCNMA1Q12791 1236 aa18.71■□□□□ 0.59
RTN1-201ENST00000267484 ECM1Q16610 540 aa18.71■□□□□ 0.59
RTN1-201ENST00000267484 TTC31Q49AM3 519 aaPredicted RBP18.71■□□□□ 0.59
RTN1-201ENST00000267484 KLHDC7AQ5VTJ3 777 aa18.71■□□□□ 0.59
RTN1-201ENST00000267484 C8orf74Q6P047 294 aa18.71■□□□□ 0.59
RTN1-201ENST00000267484 CEP95Q96GE4 821 aa18.71■□□□□ 0.59
RTN1-201ENST00000267484 SEC63Q9UGP8 760 aaKnown RBP18.71■□□□□ 0.59
RTN1-201ENST00000267484 GLI1P08151 1106 aa18.71■□□□□ 0.59
RTN1-201ENST00000267484 CDK8P49336 464 aa18.71■□□□□ 0.59
RTN1-201ENST00000267484 DDX12PQ92771 950 aa18.71■□□□□ 0.59
RTN1-201ENST00000267484 MAGEF1Q9HAY2 307 aa18.71■□□□□ 0.59
RTN1-201ENST00000267484 CARSP49589 748 aaKnown RBP18.71■□□□□ 0.59
RTN1-201ENST00000267484 NFIXQ14938 502 aa18.71■□□□□ 0.59
RTN1-201ENST00000267484 LRRC55Q6ZSA7 311 aa18.71■□□□□ 0.59
RTN1-201ENST00000267484 NFU1Q9UMS0 254 aa18.71■□□□□ 0.59
RTN1-201ENST00000267484 EDIL3O43854 480 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 SHOX2O60902 331 aaPredicted RBP18.7■□□□□ 0.58
RTN1-201ENST00000267484 LIG3P49916 1009 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 GUCY2FP51841 1108 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 UNC13DQ70J99 1090 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 SNX29Q8TEQ0 813 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 SETDB2Q96T68 719 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 COL22A1Q8NFW1 1626 aaPredicted RBP18.7■□□□□ 0.58
RTN1-201ENST00000267484 LAMB2P55268 1798 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 GNA11P29992 359 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 PDCLQ13371 301 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 PDXDC1Q6P996 788 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 NELFCDQ8IXH7 590 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 MICALL1Q8N3F8 863 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 ANKRD2Q9GZV1 360 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 GRIN2DO15399 1336 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 TCP1P17987 556 aaKnown RBP18.7■□□□□ 0.58
RTN1-201ENST00000267484 PAFAH1B1P43034 410 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 HGSNATQ68CP4 663 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 PROCA1Q8NCQ7 364 aaPredicted RBP18.7■□□□□ 0.58
RTN1-201ENST00000267484 ZIM3Q96PE6 472 aa18.7■□□□□ 0.58
RTN1-201ENST00000267484 TLR2O60603 784 aa18.69■□□□□ 0.58
RTN1-201ENST00000267484 SPTY2D1Q68D10 685 aaPredicted RBP18.69■□□□□ 0.58
RTN1-201ENST00000267484 AMIGO3Q86WK7 504 aa18.69■□□□□ 0.58
RTN1-201ENST00000267484 SPZ1Q9BXG8 430 aa18.69■□□□□ 0.58
RTN1-201ENST00000267484 PPFIA1Q13136 1202 aa18.69■□□□□ 0.58
RTN1-201ENST00000267484 UBE2SQ16763 222 aa18.69■□□□□ 0.58
RTN1-201ENST00000267484 PACSIN1Q9BY11 444 aa18.69■□□□□ 0.58
RTN1-201ENST00000267484 PALMO75781 387 aa18.68■□□□□ 0.58
RTN1-201ENST00000267484 TNNI2P48788 182 aa18.68■□□□□ 0.58
RTN1-201ENST00000267484 GUCY2DQ02846 1103 aa18.68■□□□□ 0.58
RTN1-201ENST00000267484 LRRC47Q8N1G4 583 aaKnown RBP18.68■□□□□ 0.58
RTN1-201ENST00000267484 MTMR9Q96QG7 549 aa18.68■□□□□ 0.58
RTN1-201ENST00000267484 RUFY1Q96T51 708 aa18.68■□□□□ 0.58
RTN1-201ENST00000267484 GOLPH3Q9H4A6 298 aa18.68■□□□□ 0.58
RTN1-201ENST00000267484 EPB41L5Q9HCM4 733 aa18.68■□□□□ 0.58
RTN1-201ENST00000267484 FAM170AA1A519 330 aa18.68■□□□□ 0.58
RTN1-201ENST00000267484 TRAF5O00463 557 aa18.68■□□□□ 0.58
RTN1-201ENST00000267484 BTDP43251 543 aa18.68■□□□□ 0.58
RTN1-201ENST00000267484 EPHB4P54760 987 aa18.68■□□□□ 0.58
RTN1-201ENST00000267484 POLR2FP61218 127 aaKnown RBP18.68■□□□□ 0.58
RTN1-201ENST00000267484 ASTE1Q2TB18 679 aaPredicted RBP18.68■□□□□ 0.58
RTN1-201ENST00000267484 SLC10A5Q5PT55 438 aa18.68■□□□□ 0.58
RTN1-201ENST00000267484 NOX5Q96PH1 765 aa18.68■□□□□ 0.58
RTN1-201ENST00000267484 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.68■□□□□ 0.58
RTN1-201ENST00000267484 SPATA31A1Q5TZJ5 1347 aa18.68■□□□□ 0.58
RTN1-201ENST00000267484 LCA5LO95447 670 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms