RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 SRCAPQ6ZRS2 3230 aa12.99□□□□□ -0.33
SCAF11-201ENST00000266589 SCN4AP35499 1836 aa12.99□□□□□ -0.33
SCAF11-201ENST00000266589 ZC3H4Q9UPT8 1303 aaKnown RBP12.98□□□□□ -0.33
SCAF11-201ENST00000266589 IGLV3-22A0A075B6J6 115 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 GLTPD2A6NH11 291 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 GOLGA6L6A8MZA4 724 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 MSH4O15457 936 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 ATP1A3P13637 1013 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 ERCC5P28715 1186 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-201ENST00000266589 CDC25BP30305 580 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 DHX8Q14562 1220 aaKnown RBP12.98□□□□□ -0.33
SCAF11-201ENST00000266589 TMEM119Q4V9L6 283 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 MUM1L1Q5H9M0 696 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 CT47A1Q5JQC4 288 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-201ENST00000266589 ZNF658Q5TYW1 1059 aaPredicted RBP12.98□□□□□ -0.33
SCAF11-201ENST00000266589 KLHL10Q6JEL2 608 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 ZSCAN30Q86W11 494 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 FAM20AQ96MK3 541 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 TRIM9Q9C026 710 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 FANCLQ9NW38 375 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 PNMA2Q9UL42 364 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 CSADQ9Y600 493 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 SYNRGQ9UMZ2 1314 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 KDM3AQ9Y4C1 1321 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 PPP1R3GB7ZBB8 358 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 KLRC4O43908 158 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 CCT6AP40227 531 aaKnown RBP12.98□□□□□ -0.33
SCAF11-201ENST00000266589 STAT3P40763 770 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 IREB2P48200 963 aaKnown RBP12.98□□□□□ -0.33
SCAF11-201ENST00000266589 AMPD3Q01432 767 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 KCNB1Q14721 858 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 KMT5BQ4FZB7 885 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 SV2BQ7L1I2 683 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 ZC3H15Q8WU90 426 aaKnown RBP12.98□□□□□ -0.33
SCAF11-201ENST00000266589 LARP4BQ92615 738 aaKnown RBP12.98□□□□□ -0.33
SCAF11-201ENST00000266589 CDCA5Q96FF9 252 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 MED15Q96RN5 788 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 C7orf25Q9BPX7 421 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 NFE2L3Q9Y4A8 694 aa12.98□□□□□ -0.33
SCAF11-201ENST00000266589 DSG3P32926 999 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 NF2P35240 595 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 GHRHRQ02643 423 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 SPIRE1Q08AE8 756 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 MCM6Q14566 821 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 ECM1Q16610 540 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 CATSPERGQ6ZRH7 1159 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 FAM43AQ8N2R8 423 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 RBM46Q8TBY0 533 aaKnown RBP12.97□□□□□ -0.33
SCAF11-201ENST00000266589 RAD54LQ92698 747 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 NT5C3AQ9H0P0 336 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 IFNKQ9P0W0 207 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 COL20A1Q9P218 1284 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 GRIN3BO60391 1043 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 ASIC1P78348 528 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 FANCCQ00597 558 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 COG2Q14746 738 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 EAPPQ56P03 285 aaPredicted RBP12.97□□□□□ -0.33
SCAF11-201ENST00000266589 SH3D19Q5HYK7 790 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 HYIQ5T013 277 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 NCAPH2Q6IBW4 605 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 KCNK18Q7Z418 384 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 CNKSR2Q8WXI2 1034 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 TRERF1Q96PN7 1200 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 XPO4Q9C0E2 1151 aaKnown RBP12.97□□□□□ -0.33
SCAF11-201ENST00000266589 RRAGDQ9NQL2 400 aaPredicted RBP12.97□□□□□ -0.33
SCAF11-201ENST00000266589 CTNND2Q9UQB3 1225 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 ZKSCAN5Q9Y2L8 839 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 GDAQ9Y2T3 454 aa12.97□□□□□ -0.33
SCAF11-201ENST00000266589 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.97□□□□□ -0.33
SCAF11-201ENST00000266589 RPTORQ8N122 1335 aa12.96□□□□□ -0.33
SCAF11-201ENST00000266589 POTEB3A0JP26 581 aa12.96□□□□□ -0.33
SCAF11-201ENST00000266589 POTECB2RU33 542 aa12.96□□□□□ -0.33
SCAF11-201ENST00000266589 RHOBTB3O94955 611 aa12.96□□□□□ -0.33
SCAF11-201ENST00000266589 MSNP26038 577 aaKnown RBP12.96□□□□□ -0.33
SCAF11-201ENST00000266589 STX17P56962 302 aa12.96□□□□□ -0.33
SCAF11-201ENST00000266589 CEP55Q53EZ4 464 aa12.96□□□□□ -0.33
SCAF11-201ENST00000266589 HAUS3Q68CZ6 603 aa12.96□□□□□ -0.33
SCAF11-201ENST00000266589 POTEBQ6S5H4 581 aa12.96□□□□□ -0.33
SCAF11-201ENST00000266589 REPS2Q8NFH8 660 aa12.96□□□□□ -0.33
SCAF11-201ENST00000266589 ERMNQ8TAM6 284 aa12.96□□□□□ -0.33
SCAF11-201ENST00000266589 ZNF830Q96NB3 372 aaPredicted RBP12.96□□□□□ -0.33
SCAF11-201ENST00000266589 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.96□□□□□ -0.33
SCAF11-201ENST00000266589 VAV3Q9UKW4 847 aa12.96□□□□□ -0.33
SCAF11-201ENST00000266589 ADAMTS5Q9UNA0 930 aa12.96□□□□□ -0.33
SCAF11-201ENST00000266589 RABGAP1Q9Y3P9 1069 aa12.96□□□□□ -0.33
SCAF11-201ENST00000266589 LOC285556D6RIA3 1793 aa12.96□□□□□ -0.33
SCAF11-201ENST00000266589 IQCA1LA6NCM1 817 aa12.95□□□□□ -0.34
SCAF11-201ENST00000266589 MYMKA6NI61 221 aa12.95□□□□□ -0.34
SCAF11-201ENST00000266589 SLC26A4O43511 780 aa12.95□□□□□ -0.34
SCAF11-201ENST00000266589 SERPINC1P01008 464 aa12.95□□□□□ -0.34
SCAF11-201ENST00000266589 OAZ1P54368 228 aa12.95□□□□□ -0.34
SCAF11-201ENST00000266589 RPS6P62753 249 aaKnown RBP12.95□□□□□ -0.34
SCAF11-201ENST00000266589 SEMA3FQ13275 785 aa12.95□□□□□ -0.34
SCAF11-201ENST00000266589 TTLL12Q14166 644 aaPredicted RBP12.95□□□□□ -0.34
SCAF11-201ENST00000266589 HSP90AA4PQ58FG1 418 aa12.95□□□□□ -0.34
SCAF11-201ENST00000266589 SNRNP48Q6IEG0 339 aaKnown RBP12.95□□□□□ -0.34
SCAF11-201ENST00000266589 SLC30A10Q6XR72 485 aa12.95□□□□□ -0.34
SCAF11-201ENST00000266589 SAMD3Q8N6K7 520 aa12.95□□□□□ -0.34
SCAF11-201ENST00000266589 SYTL5Q8TDW5 730 aaPredicted RBP12.95□□□□□ -0.34
SCAF11-201ENST00000266589 CCDC47Q96A33 483 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms