RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 FAM114A1Q8IWE2 563 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 C16orf45Q96MC5 204 aaPredicted RBP10.4□□□□□ -0.74
SSR3-201ENST00000265044 TEKT3Q9BXF9 490 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 RRAGDQ9NQL2 400 aaPredicted RBP10.4□□□□□ -0.74
SSR3-201ENST00000265044 ZNHIT6Q9NWK9 470 aaKnown RBP10.4□□□□□ -0.74
SSR3-201ENST00000265044 HOXC10Q9NYD6 342 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 TAB2Q9NYJ8 693 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 TUBE1Q9UJT0 475 aa10.4□□□□□ -0.74
SSR3-201ENST00000265044 ARHGEF35A5YM69 484 aa10.4□□□□□ -0.75
SSR3-201ENST00000265044 OFD1O75665 1012 aa10.4□□□□□ -0.75
SSR3-201ENST00000265044 LRRC41Q15345 812 aa10.4□□□□□ -0.75
SSR3-201ENST00000265044 SLC10A4Q96EP9 437 aa10.4□□□□□ -0.75
SSR3-201ENST00000265044 STK17AQ9UEE5 414 aa10.4□□□□□ -0.75
SSR3-201ENST00000265044 A0A087X0B3 334 aa10.39□□□□□ -0.75
SSR3-201ENST00000265044 TRIM21P19474 475 aaKnown RBP10.39□□□□□ -0.75
SSR3-201ENST00000265044 CTTNQ14247 550 aaKnown RBP10.39□□□□□ -0.75
SSR3-201ENST00000265044 SPATA1Q5VX52 437 aa10.39□□□□□ -0.75
SSR3-201ENST00000265044 DHX40Q8IX18 779 aaKnown RBP10.39□□□□□ -0.75
SSR3-201ENST00000265044 PLIN4Q96Q06 1357 aa10.39□□□□□ -0.75
SSR3-201ENST00000265044 MYH1P12882 1939 aa10.39□□□□□ -0.75
SSR3-201ENST00000265044 IQCA1LA6NCM1 817 aa10.39□□□□□ -0.75
SSR3-201ENST00000265044 ERCC5P28715 1186 aaPredicted RBP10.39□□□□□ -0.75
SSR3-201ENST00000265044 ZNF280AP59817 542 aaPredicted RBP10.39□□□□□ -0.75
SSR3-201ENST00000265044 ORC2Q13416 577 aaPredicted RBP10.39□□□□□ -0.75
SSR3-201ENST00000265044 ZNF658Q5TYW1 1059 aaPredicted RBP10.39□□□□□ -0.75
SSR3-201ENST00000265044 DLK2Q6UY11 383 aa10.39□□□□□ -0.75
SSR3-201ENST00000265044 PIGOQ8TEQ8 1089 aa10.39□□□□□ -0.75
SSR3-201ENST00000265044 PANK4Q9NVE7 773 aa10.39□□□□□ -0.75
SSR3-201ENST00000265044 PNMA2Q9UL42 364 aa10.39□□□□□ -0.75
SSR3-201ENST00000265044 ATRNL1Q5VV63 1379 aa10.39□□□□□ -0.75
SSR3-201ENST00000265044 POTEFA5A3E0 1075 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 POTEIP0CG38 1075 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 EPHX2P34913 555 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 PTGER2P43116 358 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 MORC3Q14149 939 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 TMEM132AQ24JP5 1023 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 CEP55Q53EZ4 464 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 PPP4R3AQ6IN85 833 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 POTEGQ6S5H5 508 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 POTEEQ6S8J3 1075 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 EEPD1Q7L9B9 569 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 SIAH1Q8IUQ4 282 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 MYCT1Q8N699 235 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 CCDC150Q8NCX0 1101 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 DDX12PQ92771 950 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 MRFAP1L1Q96HT8 127 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 BHMT2Q9H2M3 363 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 MAGEF1Q9HAY2 307 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 RABGAP1Q9Y3P9 1069 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 C19orf81C9J6K1 198 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 GRIN3BO60391 1043 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 PLA2G4BP0C869 781 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 NOLC1Q14978 699 aaKnown RBP eCLIP10.38□□□□□ -0.75
SSR3-201ENST00000265044 FAM26FQ5R3K3 315 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 CYP2W1Q8TAV3 490 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 ENOX1Q8TC92 643 aaKnown RBP10.38□□□□□ -0.75
SSR3-201ENST00000265044 FAM20AQ96MK3 541 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 MPHOSPH6Q99547 160 aaKnown RBP10.38□□□□□ -0.75
SSR3-201ENST00000265044 KIAA1683Q9H0B3 1180 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 BAATQ14032 418 aaPredicted RBP10.38□□□□□ -0.75
SSR3-201ENST00000265044 PDIA5Q14554 519 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 ENOX2Q16206 610 aaKnown RBP10.38□□□□□ -0.75
SSR3-201ENST00000265044 SLC30A10Q6XR72 485 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 PDLIM2Q96JY6 352 aa10.38□□□□□ -0.75
SSR3-201ENST00000265044 MRPL44Q9H9J2 332 aaKnown RBP10.38□□□□□ -0.75
SSR3-201ENST00000265044 NFIBO00712 420 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 GCNT3O95395 438 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 STXBP4Q6ZWJ1 553 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 CACNA2D4Q7Z3S7 1137 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 IGSF22Q8N9C0 903 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 HPS3Q969F9 1004 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 GTPBP4Q9BZE4 634 aaKnown RBP10.37□□□□□ -0.75
SSR3-201ENST00000265044 WDR11Q9BZH6 1224 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 DEF6Q9H4E7 631 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 MMRN2Q9H8L6 949 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 RGL1Q9NZL6 768 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 DOCK2Q92608 1830 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 B4DLN1 442 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 IPO5O00410 1097 aaKnown RBP10.37□□□□□ -0.75
SSR3-201ENST00000265044 ICAM1P05362 532 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 PTPRAP18433 802 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 PRCPP42785 496 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 RPS6P62753 249 aaKnown RBP10.37□□□□□ -0.75
SSR3-201ENST00000265044 TBC1D8BQ0IIM8 1120 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 DPYDQ12882 1025 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 MTMR1Q13613 665 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 GNPTABQ3T906 1256 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 RBM46Q8TBY0 533 aaKnown RBP10.37□□□□□ -0.75
SSR3-201ENST00000265044 NOC4LQ9BVI4 516 aaKnown RBP10.37□□□□□ -0.75
SSR3-201ENST00000265044 STK24Q9Y6E0 443 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 CNTNAP1P78357 1384 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 TRIM49BA6NDI0 452 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 MEIS2O14770 477 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 MYL1P05976 194 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 PPP1R2P41236 205 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 IL17AQ16552 155 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 MYOCDQ8IZQ8 938 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 TRIM9Q9C026 710 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 PPP1R9AQ9ULJ8 1098 aa10.37□□□□□ -0.75
SSR3-201ENST00000265044 IVNS1ABPQ9Y6Y0 642 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms