RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 MMP10P09238 476 aa18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 MECOMQ03112 1051 aa18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 COA7Q96BR5 231 aa18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 COX16Q9P0S2 106 aa18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 ATF5Q9Y2D1 282 aaPredicted RBP18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 PRPF3O43395 683 aaKnown RBP18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 MMP1P03956 469 aa18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 ATF2P15336 505 aa18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 BBS5Q8N3I7 341 aa18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 PGBD1Q96JS3 809 aa18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 VCXQ9H320 206 aa18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 ZNF215Q9UL58 517 aaPredicted RBP18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 PRR36Q9H6K5 1346 aa18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 TYW5A2RUC4 315 aaKnown RBP18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 AFPP02771 609 aaKnown RBP18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 ARHGAP25P42331 645 aa18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 PTPROQ16827 1216 aa18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 RPS6KA4O75676 772 aa18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 USP17L2Q6R6M4 530 aa18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 SNX25Q9H3E2 840 aa18.37■□□□□ 0.53
CROCCP3-201ENST00000263511 GOLGA8CPA6NN73 597 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 H7C0C1 242 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 ZSCAN20P17040 1043 aaPredicted RBP18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 ATP5OP48047 213 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 DYNLL2Q96FJ2 89 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 ARAP3Q8WWN8 1544 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 FKBP3Q00688 224 aaKnown RBP18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 KIF23Q02241 960 aaPredicted RBP18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 RASGRF1Q13972 1273 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 PPP1R2P3Q6NXS1 205 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 TTLL11Q8NHH1 800 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 MGARPQ8TDB4 240 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 IPO11Q9UI26 975 aaKnown RBP18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 THAP12O43422 761 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 ZNF853P0CG23 659 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 DPH5Q9H2P9 285 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 BCAP29Q9UHQ4 241 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 RPAP1Q9BWH6 1393 aaPredicted RBP18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 MIGA2Q7L4E1 593 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 CCDC13Q8IYE1 715 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 TRMT2AQ8IZ69 625 aaKnown RBP18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 GDAP1L1Q96MZ0 367 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 PASKQ96RG2 1323 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 ARHGEF37A1IGU5 675 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 PRPSAP1Q14558 356 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 KAZNQ674X7 775 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 RUNDC3BQ96NL0 473 aa18.36■□□□□ 0.53
CROCCP3-201ENST00000263511 ETF1P62495 437 aaKnown RBP18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 LMNB2Q03252 620 aa18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 CDC37Q16543 378 aaPredicted RBP18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 Q3C1V9 767 aa18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 ZSWIM5Q9P217 1185 aa18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 PSAPP07602 524 aa18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 FAM149B1Q96BN6 582 aa18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 EEF2KMTQ96G04 330 aa18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 RABEP2Q9H5N1 569 aa18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 SYNMO15061 1565 aa18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 SLFN14P0C7P3 912 aa18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 PCK1P35558 622 aa18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 LIFRP42702 1097 aa18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 CDK8P49336 464 aa18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 PPARDQ03181 441 aa18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 RNASELQ05823 741 aaKnown RBP18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 CDKL2Q92772 493 aa18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 RAB3IPQ96QF0 476 aaPredicted RBP18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 PKP1Q13835 747 aa18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 MAN2A1Q16706 1144 aa18.35■□□□□ 0.53
CROCCP3-201ENST00000263511 RASSF2P50749 326 aa18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 ADAT2Q7Z6V5 191 aaKnown RBP18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 LRRC8AQ8IWT6 810 aa18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 NLRP7Q8WX94 980 aa18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 PRKAG2Q9UGJ0 569 aa18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 PNMA6FA0A0J9YX94 578 aa18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 OAS2P29728 719 aaKnown RBP18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 MESDQ14696 234 aa18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 SEPT2Q15019 361 aa18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 ZNF658Q5TYW1 1059 aaPredicted RBP18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 C4orf50Q6ZRC1 276 aa18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 SLC10A4Q96EP9 437 aa18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 ZNF335Q9H4Z2 1342 aaPredicted RBP18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 H7C1W4 665 aa18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 HOXA7P31268 230 aaPredicted RBP18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 CASP14P31944 242 aa18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 LRRC41Q15345 812 aa18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 LMNTD2Q8IXW0 634 aa18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 PIH1D3Q9NQM4 214 aaKnown RBP18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 EIF3CLB5ME19 914 aaKnown RBP18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 TMEM179Q6ZVK1 233 aa18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 EIF3CQ99613 913 aaKnown RBP18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 PNMA3Q9UL41 463 aa18.34■□□□□ 0.53
CROCCP3-201ENST00000263511 ASNSP08243 561 aa18.33■□□□□ 0.53
CROCCP3-201ENST00000263511 GARSP41250 739 aaKnown RBP18.33■□□□□ 0.53
CROCCP3-201ENST00000263511 TFAMQ00059 246 aaKnown RBP18.33■□□□□ 0.53
CROCCP3-201ENST00000263511 RASSF7Q02833 373 aa18.33■□□□□ 0.53
CROCCP3-201ENST00000263511 MTERF2Q49AM1 385 aa18.33■□□□□ 0.53
CROCCP3-201ENST00000263511 ANKRD13CQ8N6S4 541 aa18.33■□□□□ 0.53
CROCCP3-201ENST00000263511 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.33■□□□□ 0.53
CROCCP3-201ENST00000263511 ESYT2A0FGR8 921 aa18.33■□□□□ 0.53
CROCCP3-201ENST00000263511 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.53
CROCCP3-201ENST00000263511 EHHADHQ08426 723 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms