RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 CAPN6Q9Y6Q1 641 aa16.08■□□□□ 0.17
SFSWAP-201ENST00000261674 MYH10P35580 1976 aa16.08■□□□□ 0.16
SFSWAP-201ENST00000261674 FAM170AA1A519 330 aa16.08■□□□□ 0.16
SFSWAP-201ENST00000261674 BICDL2A1A5D9 508 aa16.08■□□□□ 0.16
SFSWAP-201ENST00000261674 TACC1O75410 805 aa16.08■□□□□ 0.16
SFSWAP-201ENST00000261674 IVLP07476 585 aa16.08■□□□□ 0.16
SFSWAP-201ENST00000261674 FGRP09769 529 aa16.08■□□□□ 0.16
SFSWAP-201ENST00000261674 GNAQP50148 359 aa16.08■□□□□ 0.16
SFSWAP-201ENST00000261674 NONOQ15233 471 aaKnown RBP eCLIP16.08■□□□□ 0.161e-6■■■□□ 17.7
SFSWAP-201ENST00000261674 GJA10Q969M2 543 aa16.08■□□□□ 0.16
SFSWAP-201ENST00000261674 DMGDHQ9UI17 866 aaKnown RBP16.08■□□□□ 0.16
SFSWAP-201ENST00000261674 HPCAL4Q9UM19 191 aa16.08■□□□□ 0.16
SFSWAP-201ENST00000261674 ZBTB12Q9Y330 459 aaPredicted RBP16.08■□□□□ 0.16
SFSWAP-201ENST00000261674 RASSF10A6NK89 507 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 PPIP5K2O43314 1243 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 TUBBP07437 444 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 HOXA10P31260 410 aaPredicted RBP16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 C12orf60Q5U649 245 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 WDR93Q6P2C0 686 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 DHTKD1Q96HY7 919 aaPredicted RBP16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 LRRC1Q9BTT6 524 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 ZHX3Q9H4I2 956 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 MED4Q9NPJ6 270 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 SEC63Q9UGP8 760 aaKnown RBP16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 SCN7AQ01118 1682 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 CICQ96RK0 1608 aaPredicted RBP16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 STXBP3O00186 592 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 SYF2O95926 243 aaKnown RBP16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 KCNB1Q14721 858 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 PTPROQ16827 1216 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 KCTD19Q17RG1 926 aaPredicted RBP16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 LRRC31Q6UY01 552 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 DGKHQ86XP1 1220 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 SP8Q8IXZ3 490 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 TTLL6Q8N841 843 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 BARHL2Q9NY43 387 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 LEMD3Q9Y2U8 911 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 FRMPD2Q68DX3 1309 aaPredicted RBP16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 RREB1Q92766 1687 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 ZNF263O14978 683 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 ATP2B4P23634 1241 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 TMC4Q7Z404 712 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 FAM114A1Q8IWE2 563 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 PIGSQ96S52 555 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 NUP58Q9BVL2 599 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 CCSER1Q9C0I3 900 aa16.07■□□□□ 0.16
SFSWAP-201ENST00000261674 GOLGA6BA6NDN3 693 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 MAGEA1P43355 309 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 AMPD3Q01432 767 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 RASSF7Q02833 373 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 RBM26Q5T8P6 1007 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 SV2BQ7L1I2 683 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 PLCD3Q8N3E9 789 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 COA7Q96BR5 231 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 BCORQ6W2J9 1755 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 POTEMA6NI47 508 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 MCM3P25205 808 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 PAPD7Q5XG87 772 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 RRP36Q96EU6 259 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 EHD4Q9H223 541 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 C6orf50Q9HD87 102 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 KIF11P52732 1056 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 VAV2P52735 878 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 GRM4Q14833 912 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 NEK8Q86SG6 692 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 GLIS3Q8NEA6 775 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 SEMA6BQ9H3T3 888 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 PCDHA13Q9Y5I0 950 aa16.06■□□□□ 0.16
SFSWAP-201ENST00000261674 PCNTO95613 3336 aa16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 GOLGA6CA6NDK9 693 aa16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 EIF3CLB5ME19 914 aaKnown RBP16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 GOLGA6DP0CG33 693 aa16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 CCNI2Q6ZMN8 369 aaPredicted RBP16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 RUFY1Q96T51 708 aa16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 EYA3Q99504 573 aa16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 EIF3CQ99613 913 aaKnown RBP16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 NDST4Q9H3R1 872 aa16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 GOLGA6AQ9NYA3 693 aa16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 ARHGAP20Q9P2F6 1191 aa16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 TULP1O00294 542 aaPredicted RBP16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 TNNI2P48788 182 aa16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 TCP10Q12799 353 aa16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 KIAA0895Q8NCT3 520 aa16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 IFT81Q8WYA0 676 aa16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 MS4A14Q96JA4 679 aa16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.05■□□□□ 0.16
SFSWAP-201ENST00000261674 BAG3O95817 575 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 GFPT1Q06210 699 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 MIIPQ5JXC2 388 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 CNNM4Q6P4Q7 775 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 FAM76AQ8TAV0 307 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 LRRC53A6NM62 1247 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 PAFAH1B1P43034 410 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 SPTY2D1Q68D10 685 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 KCTD16Q68DU8 428 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 CLEC10AQ8IUN9 316 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 NELFCDQ8IXH7 590 aa16.04■□□□□ 0.16
SFSWAP-201ENST00000261674 CCDC170Q8IYT3 715 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms