RNA–Protein interactions for RNA: ENST00000261647.9

TTC19-201, Transcript of tetratricopeptide repeat domain 19, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC19, Length 3,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-201ENST00000261647 HGSNATQ68CP4 663 aa20.77■□□□□ 0.91
TTC19-201ENST00000261647 CACNA2D4Q7Z3S7 1137 aa20.77■□□□□ 0.91
TTC19-201ENST00000261647 DDX42Q86XP3 938 aaKnown RBP eCLIP20.77■□□□□ 0.91
TTC19-201ENST00000261647 NOX5Q96PH1 765 aa20.77■□□□□ 0.91
TTC19-201ENST00000261647 E7EVH7 732 aa20.76■□□□□ 0.91
TTC19-201ENST00000261647 TLR2O60603 784 aa20.76■□□□□ 0.91
TTC19-201ENST00000261647 PPP1R37O75864 691 aa20.76■□□□□ 0.91
TTC19-201ENST00000261647 LCA5LO95447 670 aa20.76■□□□□ 0.91
TTC19-201ENST00000261647 KLRC1P26715 233 aa20.76■□□□□ 0.91
TTC19-201ENST00000261647 NLRP14Q86W24 1093 aa20.76■□□□□ 0.91
TTC19-201ENST00000261647 MYCBPAPQ8TBZ2 947 aa20.76■□□□□ 0.91
TTC19-201ENST00000261647 C7orf25Q9BPX7 421 aa20.76■□□□□ 0.91
TTC19-201ENST00000261647 MYMKA6NI61 221 aa20.76■□□□□ 0.91
TTC19-201ENST00000261647 SSBP05455 408 aaKnown RBP eCLIP20.76■□□□□ 0.91
TTC19-201ENST00000261647 PRDX5P30044 214 aa20.76■□□□□ 0.91
TTC19-201ENST00000261647 KCNMA1Q12791 1236 aa20.76■□□□□ 0.91
TTC19-201ENST00000261647 PLAAQ9Y263 795 aa20.76■□□□□ 0.91
TTC19-201ENST00000261647 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.75■□□□□ 0.91
TTC19-201ENST00000261647 ERVV-1B6SEH8 477 aa20.75■□□□□ 0.91
TTC19-201ENST00000261647 RAD51CO43502 376 aa20.75■□□□□ 0.91
TTC19-201ENST00000261647 ACTN3Q08043 901 aaPredicted RBP20.75■□□□□ 0.91
TTC19-201ENST00000261647 CENPPQ6IPU0 288 aa20.75■□□□□ 0.91
TTC19-201ENST00000261647 MAD2L2Q9UI95 211 aa20.75■□□□□ 0.91
TTC19-201ENST00000261647 ZNF142P52746 1687 aaPredicted RBP20.75■□□□□ 0.91
TTC19-201ENST00000261647 ORC4O43929 436 aa20.75■□□□□ 0.91
TTC19-201ENST00000261647 KIF5BP33176 963 aa20.75■□□□□ 0.91
TTC19-201ENST00000261647 SF3B2Q13435 895 aaKnown RBP20.75■□□□□ 0.91
TTC19-201ENST00000261647 NSUN4Q96CB9 384 aaKnown RBP20.75■□□□□ 0.91
TTC19-201ENST00000261647 FAM84BQ96KN1 310 aaPredicted RBP20.75■□□□□ 0.91
TTC19-201ENST00000261647 MCM9Q9NXL9 1143 aa20.75■□□□□ 0.91
TTC19-201ENST00000261647 TFCP2L1Q9NZI6 479 aa20.75■□□□□ 0.91
TTC19-201ENST00000261647 ARAP2Q8WZ64 1704 aa20.75■□□□□ 0.91
TTC19-201ENST00000261647 STXBP3O00186 592 aa20.75■□□□□ 0.91
TTC19-201ENST00000261647 TXKP42681 527 aa20.75■□□□□ 0.91
TTC19-201ENST00000261647 PDXDC1Q6P996 788 aa20.75■□□□□ 0.91
TTC19-201ENST00000261647 SLC44A5Q8NCS7 719 aa20.75■□□□□ 0.91
TTC19-201ENST00000261647 UIMC1Q96RL1 719 aa20.75■□□□□ 0.91
TTC19-201ENST00000261647 LRP5O75197 1615 aa20.75■□□□□ 0.91
TTC19-201ENST00000261647 SHANK3Q9BYB0 1731 aa20.74■□□□□ 0.91
TTC19-201ENST00000261647 ZNF804BA4D1E1 1349 aa20.74■□□□□ 0.91
TTC19-201ENST00000261647 FSBPO95073 299 aa20.74■□□□□ 0.91
TTC19-201ENST00000261647 OR52Z1P0C646 297 aa20.74■□□□□ 0.91
TTC19-201ENST00000261647 TMOD1P28289 359 aa20.74■□□□□ 0.91
TTC19-201ENST00000261647 MDH1P40925 334 aaKnown RBP20.74■□□□□ 0.91
TTC19-201ENST00000261647 PSEN1P49768 467 aa20.74■□□□□ 0.91
TTC19-201ENST00000261647 SF3A3Q12874 501 aaKnown RBP eCLIP20.74■□□□□ 0.912e-7■■■■■ 27.2
TTC19-201ENST00000261647 CCDC47Q96A33 483 aaKnown RBP20.74■□□□□ 0.91
TTC19-201ENST00000261647 NIP7Q9Y221 180 aaKnown RBP eCLIP20.74■□□□□ 0.91
TTC19-201ENST00000261647 FAM170AA1A519 330 aa20.74■□□□□ 0.91
TTC19-201ENST00000261647 MYL1P05976 194 aa20.74■□□□□ 0.91
TTC19-201ENST00000261647 CHADLQ6NUI6 762 aa20.74■□□□□ 0.91
TTC19-201ENST00000261647 ATP6V1G3Q96LB4 118 aa20.74■□□□□ 0.91
TTC19-201ENST00000261647 VAT1LQ9HCJ6 419 aa20.74■□□□□ 0.91
TTC19-201ENST00000261647 SUFUQ9UMX1 484 aa20.74■□□□□ 0.91
TTC19-201ENST00000261647 CACNA1SQ13698 1873 aa20.74■□□□□ 0.91
TTC19-201ENST00000261647 PJA2O43164 708 aa20.73■□□□□ 0.91
TTC19-201ENST00000261647 CCDC172P0C7W6 258 aa20.73■□□□□ 0.91
TTC19-201ENST00000261647 PAK2Q13177 524 aa20.73■□□□□ 0.91
TTC19-201ENST00000261647 MAN2A1Q16706 1144 aa20.73■□□□□ 0.91
TTC19-201ENST00000261647 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.73■□□□□ 0.91
TTC19-201ENST00000261647 BCCIPQ9P287 314 aaKnown RBP eCLIP20.73■□□□□ 0.91
TTC19-201ENST00000261647 ATP2C2O75185 946 aa20.73■□□□□ 0.91
TTC19-201ENST00000261647 TNFRSF8P28908 595 aa20.73■□□□□ 0.91
TTC19-201ENST00000261647 IL6STP40189 918 aaPredicted RBP20.73■□□□□ 0.91
TTC19-201ENST00000261647 ITGB3BPQ13352 177 aaPredicted RBP20.73■□□□□ 0.91
TTC19-201ENST00000261647 HLTFQ14527 1009 aaKnown RBP eCLIP20.73■□□□□ 0.91
TTC19-201ENST00000261647 TMED8Q6PL24 325 aaPredicted RBP20.73■□□□□ 0.91
TTC19-201ENST00000261647 TBC1D5Q92609 795 aa20.73■□□□□ 0.91
TTC19-201ENST00000261647 NUDT12Q9BQG2 462 aa20.73■□□□□ 0.91
TTC19-201ENST00000261647 LRRC4CQ9HCJ2 640 aa20.73■□□□□ 0.91
TTC19-201ENST00000261647 QPCTQ16769 361 aa20.72■□□□□ 0.91
TTC19-201ENST00000261647 CNNM4Q6P4Q7 775 aa20.72■□□□□ 0.91
TTC19-201ENST00000261647 CCDC13Q8IYE1 715 aa20.72■□□□□ 0.91
TTC19-201ENST00000261647 BLOC1S4Q9NUP1 217 aa20.72■□□□□ 0.91
TTC19-201ENST00000261647 ECM2O94769 699 aaPredicted RBP20.72■□□□□ 0.91
TTC19-201ENST00000261647 DHX37Q8IY37 1157 aaKnown RBP20.72■□□□□ 0.91
TTC19-201ENST00000261647 TMEM260Q9NX78 707 aa20.72■□□□□ 0.91
TTC19-201ENST00000261647 STX8Q9UNK0 236 aa20.72■□□□□ 0.91
TTC19-201ENST00000261647 ZKSCAN4Q969J2 545 aaPredicted RBP20.72■□□□□ 0.91
TTC19-201ENST00000261647 GJA10Q969M2 543 aa20.72■□□□□ 0.91
TTC19-201ENST00000261647 TBC1D7Q9P0N9 293 aa20.72■□□□□ 0.91
TTC19-201ENST00000261647 NOL4O94818 638 aa20.71■□□□□ 0.91
TTC19-201ENST00000261647 FLT3P36888 993 aa20.71■□□□□ 0.91
TTC19-201ENST00000261647 POLR2FP61218 127 aaKnown RBP20.71■□□□□ 0.91
TTC19-201ENST00000261647 ERVK-9P63128 1117 aa20.71■□□□□ 0.91
TTC19-201ENST00000261647 GRB10Q13322 594 aa20.71■□□□□ 0.91
TTC19-201ENST00000261647 GIMAP7Q8NHV1 300 aa20.71■□□□□ 0.91
TTC19-201ENST00000261647 RUBCNQ92622 972 aa20.71■□□□□ 0.91
TTC19-201ENST00000261647 BARHL2Q9NY43 387 aa20.71■□□□□ 0.91
TTC19-201ENST00000261647 BIN2Q9UBW5 565 aaPredicted RBP20.71■□□□□ 0.91
TTC19-201ENST00000261647 ADAMTS1Q9UHI8 967 aa20.71■□□□□ 0.91
TTC19-201ENST00000261647 TAF1P21675 1872 aa20.71■□□□□ 0.91
TTC19-201ENST00000261647 A0A087X0T9 212 aa20.71■□□□□ 0.91
TTC19-201ENST00000261647 FAM228BP0C875 321 aa20.71■□□□□ 0.91
TTC19-201ENST00000261647 RDXP35241 583 aaKnown RBP20.71■□□□□ 0.91
TTC19-201ENST00000261647 KCNK18Q7Z418 384 aa20.71■□□□□ 0.91
TTC19-201ENST00000261647 NEUROG2Q9H2A3 272 aa20.71■□□□□ 0.91
TTC19-201ENST00000261647 GLE1Q53GS7 698 aaKnown RBP20.7■□□□□ 0.9
TTC19-201ENST00000261647 CAVIN4Q5BKX8 364 aa20.7■□□□□ 0.9
TTC19-201ENST00000261647 LRRC55Q6ZSA7 311 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms