RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 AARSP49588 968 aaKnown RBP eCLIP9.05□□□□□ -0.96
SNCAIP-201ENST00000261367 PLCB3Q01970 1234 aa9.05□□□□□ -0.96
SNCAIP-201ENST00000261367 TMEM259Q4ZIN3 620 aa9.05□□□□□ -0.96
SNCAIP-201ENST00000261367 ATG16L1Q676U5 607 aa9.05□□□□□ -0.96
SNCAIP-201ENST00000261367 ARMCX5Q6P1M9 558 aa9.05□□□□□ -0.96
SNCAIP-201ENST00000261367 SPDYE1Q8NFV5 336 aaPredicted RBP9.05□□□□□ -0.96
SNCAIP-201ENST00000261367 CORO1CQ9ULV4 474 aaPredicted RBP9.05□□□□□ -0.96
SNCAIP-201ENST00000261367 FRMD4BQ9Y2L6 1034 aa9.05□□□□□ -0.96
SNCAIP-201ENST00000261367 ZNF711Q9Y462 761 aa9.05□□□□□ -0.96
SNCAIP-201ENST00000261367 PCDHA5Q9Y5H7 936 aa9.05□□□□□ -0.96
SNCAIP-201ENST00000261367 TMEM110-MUSTN1A8MSY1 372 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 O00370 1275 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 HSPA8P11142 646 aaKnown RBP9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 CPA1P15085 419 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 LONP1P36776 959 aaKnown RBP9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 NUGGCQ68CJ6 796 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 TOGARAM2Q6ZUX3 1019 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 ICA1LQ8NDH6 482 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 CDC5LQ99459 802 aaKnown RBP9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 SENP1Q9P0U3 644 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 RAB21Q9UL25 225 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 CDHR2Q9BYE9 1310 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 ADCY9O60503 1353 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 FAM83GA6ND36 823 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 LAD1O00515 517 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 AP1B1Q10567 949 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 KRT24Q2M2I5 525 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 BZW1Q7L1Q6 419 aaKnown RBP9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 RASGRP2Q7LDG7 609 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 TRPM8Q7Z2W7 1104 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 ANKLE2Q86XL3 938 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 SLF2Q8IX21 1173 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 INTUQ9ULD6 942 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 L1RE1Q9UN81 338 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 TECPR2O15040 1411 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 TTC4O95801 387 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 APOEP02649 317 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 MED21Q13503 144 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 CUL4BQ13620 913 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 RCN2Q14257 317 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 IQCB1Q15051 598 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 ZNF658Q5TYW1 1059 aaPredicted RBP9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 GALNT17Q6IS24 598 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 SDCCAG3Q96C92 435 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 TRIM15Q9C019 465 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 FOXP1Q9H334 677 aaPredicted RBP9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 VPS37BQ9H9H4 285 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 NHEJ1Q9H9Q4 299 aaPredicted RBP9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 ETNK1Q9HBU6 452 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 METTL14Q9HCE5 456 aaKnown RBP9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 CD248Q9HCU0 757 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 ZFP69BQ9UJL9 534 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 MAN1B1Q9UKM7 699 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 TRAF3IP3Q9Y228 551 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 USP15Q9Y4E8 981 aaPredicted RBP9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 DEAF1O75398 565 aaPredicted RBP9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 E2F6O75461 281 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 EEF2P13639 858 aaKnown RBP9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 KRT4P19013 534 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 TMEM132AQ24JP5 1023 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 CAVIN4Q5BKX8 364 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 EGFL6Q8IUX8 553 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 KBTBD3Q8NAB2 608 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 ZNF579Q8NAF0 562 aaKnown RBP9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 CHAMP1Q96JM3 812 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 NFU1Q9UMS0 254 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 PCDHA13Q9Y5I0 950 aa9.04□□□□□ -0.96
SNCAIP-201ENST00000261367 A0A1W2PQC6 194 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 MYO1FO00160 1098 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 PSMD14O00487 310 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 DKC1O60832 514 aaKnown RBP eCLIP9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 MRPL12P52815 198 aaKnown RBP9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 SNX29Q8TEQ0 813 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 ATP6V0A1Q93050 837 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 ABHD10Q9NUJ1 306 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 CTNNAL1Q9UBT7 734 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 ITSN1Q15811 1721 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 EXOC5O00471 708 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 C21orf2O43822 256 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 N4BP1O75113 896 aaKnown RBP9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 SERPING1P05155 500 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 IFNAR2P48551 515 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 CABP4P57796 275 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 RSRC2Q7L4I2 434 aaKnown RBP9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 ACRBPQ8NEB7 543 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 EDEM3Q9BZQ6 932 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 CARD9Q9H257 536 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 C15orf41Q9Y2V0 281 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 ENC1O14682 589 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 HAUS5O94927 633 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 ZRANB2O95218 330 aaKnown RBP eCLIP9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 ATF3P18847 181 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 STAT1P42224 750 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 SERPINB10P48595 397 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 MDM2Q00987 491 aaPredicted RBP9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 DNAL1Q4LDG9 190 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 SPATA21Q7Z572 469 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 CXorf38Q8TB03 319 aa9.03□□□□□ -0.96
SNCAIP-201ENST00000261367 JARID2Q92833 1246 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms